EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000011548 (Gene tree)
Gene ID: 101061055
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 3897 bases
Position: chr14:868821-872717
Accession: 101061055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000054097	MTS	PF05175.14	3.4e-05	1	1
ENSTRUP00000029169	MTS	PF05175.14	6.3e-05	1	1
ENSTRUP00000029169	Met_10	PF02475.16	8.4e-31	1	1
ENSTRUP00000054097	Met_10	PF02475.16	9.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000029285	-	1209	XM_003970151	ENSTRUP00000029169	402 (aa)	XP_003970200	H2TWW0
ENSTRUT00000053011	-	1305	-	ENSTRUP00000054097	434 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000011548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000011548's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000011548	trmt12	95	50.000	ENSG00000183665	TRMT12	94	49.644	Homo_sapiens
ENSTRUG00000011548	trmt12	99	71.464	ENSAPOG00000011979	trmt12	99	71.464	Acanthochromis_polyacanthus
ENSTRUG00000011548	trmt12	95	49.760	ENSAMEG00000019612	TRMT12	92	50.365	Ailuropoda_melanoleuca
ENSTRUG00000011548	trmt12	94	69.091	ENSACIG00000012982	trmt12	99	71.169	Amphilophus_citrinellus
ENSTRUG00000011548	trmt12	99	72.180	ENSAOCG00000020570	trmt12	99	73.228	Amphiprion_ocellaris
ENSTRUG00000011548	trmt12	99	73.183	ENSAPEG00000006335	trmt12	99	74.278	Amphiprion_percula
ENSTRUG00000011548	trmt12	99	70.617	ENSATEG00000018316	trmt12	99	70.617	Anabas_testudineus
ENSTRUG00000011548	trmt12	99	67.990	ENSACLG00000001008	trmt12	99	67.990	Astatotilapia_calliptera
ENSTRUG00000011548	trmt12	99	57.007	ENSAMXG00000040366	trmt12	99	57.007	Astyanax_mexicanus
ENSTRUG00000011548	trmt12	95	50.120	ENSBTAG00000020398	TRMT12	91	50.000	Bos_taurus
ENSTRUG00000011548	trmt12	58	38.298	WBGene00009586	F40F9.10	50	38.298	Caenorhabditis_elegans
ENSTRUG00000011548	trmt12	95	47.101	ENSCJAG00000022174	TRMT12	94	47.268	Callithrix_jacchus
ENSTRUG00000011548	trmt12	95	49.275	ENSCAFG00000001040	TRMT12	96	49.406	Canis_familiaris
ENSTRUG00000011548	trmt12	95	49.275	ENSCAFG00020006500	TRMT12	96	49.406	Canis_lupus_dingo
ENSTRUG00000011548	trmt12	95	49.639	ENSCHIG00000016574	TRMT12	96	49.524	Capra_hircus
ENSTRUG00000011548	trmt12	95	49.153	ENSCPOG00000026520	TRMT12	93	49.153	Cavia_porcellus
ENSTRUG00000011548	trmt12	95	49.398	ENSCSAG00000018615	TRMT12	94	49.526	Chlorocebus_sabaeus
ENSTRUG00000011548	trmt12	98	48.624	ENSCPBG00000014290	TRMT12	95	48.624	Chrysemys_picta_bellii
ENSTRUG00000011548	trmt12	71	47.279	ENSCING00000019633	-	97	47.279	Ciona_intestinalis
ENSTRUG00000011548	trmt12	77	46.945	ENSCSAVG00000000415	-	98	46.945	Ciona_savignyi
ENSTRUG00000011548	trmt12	95	48.379	ENSCGRG00001014834	Trmt12	94	49.750	Cricetulus_griseus_chok1gshd
ENSTRUG00000011548	trmt12	100	65.228	ENSCSEG00000002675	trmt12	96	65.228	Cynoglossus_semilaevis
ENSTRUG00000011548	trmt12	99	66.501	ENSCVAG00000005590	trmt12	99	66.501	Cyprinodon_variegatus
ENSTRUG00000011548	trmt12	99	55.583	ENSDARG00000060338	trmt12	99	55.674	Danio_rerio
ENSTRUG00000011548	trmt12	95	47.482	ENSETEG00000009373	TRMT12	92	47.482	Echinops_telfairi
ENSTRUG00000011548	trmt12	95	49.519	ENSEASG00005022441	TRMT12	96	49.644	Equus_asinus_asinus
ENSTRUG00000011548	trmt12	95	47.458	ENSEEUG00000004844	TRMT12	92	48.655	Erinaceus_europaeus
ENSTRUG00000011548	trmt12	99	61.614	ENSELUG00000004240	trmt12	99	62.865	Esox_lucius
ENSTRUG00000011548	trmt12	65	56.842	ENSFALG00000003825	TRMT12	97	60.930	Ficedula_albicollis
ENSTRUG00000011548	trmt12	95	49.519	ENSFDAG00000016647	TRMT12	96	49.881	Fukomys_damarensis
ENSTRUG00000011548	trmt12	92	61.170	ENSFHEG00000017338	trmt12	96	63.032	Fundulus_heteroclitus
ENSTRUG00000011548	trmt12	77	56.798	ENSGALG00000006773	TRMT12	77	55.966	Gallus_gallus
ENSTRUG00000011548	trmt12	99	66.418	ENSGAFG00000020056	trmt12	99	66.418	Gambusia_affinis
ENSTRUG00000011548	trmt12	95	66.494	ENSGACG00000017351	trmt12	99	68.217	Gasterosteus_aculeatus
ENSTRUG00000011548	trmt12	98	49.423	ENSGAGG00000006032	TRMT12	97	49.423	Gopherus_agassizii
ENSTRUG00000011548	trmt12	99	67.742	ENSHBUG00000016412	trmt12	99	67.742	Haplochromis_burtoni
ENSTRUG00000011548	trmt12	95	50.000	ENSHGLG00000020498	TRMT12	96	50.000	Heterocephalus_glaber_female
ENSTRUG00000011548	trmt12	95	50.000	ENSHGLG00100020132	TRMT12	96	50.000	Heterocephalus_glaber_male
ENSTRUG00000011548	trmt12	99	65.404	ENSHCOG00000005050	trmt12	96	70.606	Hippocampus_comes
ENSTRUG00000011548	trmt12	99	55.961	ENSIPUG00000018011	trmt12	92	55.961	Ictalurus_punctatus
ENSTRUG00000011548	trmt12	96	49.043	ENSSTOG00000030617	TRMT12	95	49.043	Ictidomys_tridecemlineatus
ENSTRUG00000011548	trmt12	99	69.077	ENSKMAG00000000891	trmt12	99	69.077	Kryptolebias_marmoratus
ENSTRUG00000011548	trmt12	53	75.576	ENSLBEG00000017456	-	88	75.576	Labrus_bergylta
ENSTRUG00000011548	trmt12	99	65.915	ENSLBEG00000028712	trmt12	99	65.915	Labrus_bergylta
ENSTRUG00000011548	trmt12	96	49.052	ENSLACG00000015869	TRMT12	94	49.052	Latimeria_chalumnae
ENSTRUG00000011548	trmt12	98	54.657	ENSLOCG00000015290	trmt12	99	54.657	Lepisosteus_oculatus
ENSTRUG00000011548	trmt12	98	48.131	ENSLAFG00000012519	TRMT12	97	48.131	Loxodonta_africana
ENSTRUG00000011548	trmt12	95	48.916	ENSMMUG00000015490	TRMT12	94	49.052	Macaca_mulatta
ENSTRUG00000011548	trmt12	99	69.975	ENSMAMG00000020311	trmt12	99	69.975	Mastacembelus_armatus
ENSTRUG00000011548	trmt12	99	67.742	ENSMZEG00005007349	trmt12	99	67.742	Maylandia_zebra
ENSTRUG00000011548	trmt12	98	48.936	ENSMGAG00000004174	TRMT12	95	49.292	Meleagris_gallopavo
ENSTRUG00000011548	trmt12	99	73.250	ENSMMOG00000000412	trmt12	99	73.250	Mola_mola
ENSTRUG00000011548	trmt12	95	48.379	ENSMODG00000021403	-	94	49.510	Monodelphis_domestica
ENSTRUG00000011548	trmt12	98	46.618	ENSMODG00000011798	-	86	48.284	Monodelphis_domestica
ENSTRUG00000011548	trmt12	99	70.123	ENSMALG00000008668	trmt12	99	70.123	Monopterus_albus
ENSTRUG00000011548	trmt12	95	47.368	MGP_CAROLIEiJ_G0019820	Trmt12	97	48.028	Mus_caroli
ENSTRUG00000011548	trmt12	95	48.086	ENSMUSG00000037085	Trmt12	96	48.724	Mus_musculus
ENSTRUG00000011548	trmt12	95	48.426	MGP_PahariEiJ_G0019829	Trmt12	97	48.492	Mus_pahari
ENSTRUG00000011548	trmt12	95	47.847	MGP_SPRETEiJ_G0020717	Trmt12	96	48.492	Mus_spretus
ENSTRUG00000011548	trmt12	95	49.038	ENSMPUG00000019150	TRMT12	94	48.931	Mustela_putorius_furo
ENSTRUG00000011548	trmt12	95	49.157	ENSMLUG00000003753	TRMT12	96	48.815	Myotis_lucifugus
ENSTRUG00000011548	trmt12	95	46.523	ENSNGAG00000014548	Trmt12	95	46.523	Nannospalax_galili
ENSTRUG00000011548	trmt12	99	67.419	ENSNBRG00000021510	trmt12	99	67.419	Neolamprologus_brichardi
ENSTRUG00000011548	trmt12	96	45.084	ENSOPRG00000008067	TRMT12	98	44.545	Ochotona_princeps
ENSTRUG00000011548	trmt12	95	49.517	ENSODEG00000018933	TRMT12	96	49.406	Octodon_degus
ENSTRUG00000011548	trmt12	99	68.734	ENSONIG00000002614	trmt12	99	68.734	Oreochromis_niloticus
ENSTRUG00000011548	trmt12	95	44.118	ENSOANG00000009987	TRMT12	98	43.972	Ornithorhynchus_anatinus
ENSTRUG00000011548	trmt12	95	44.365	ENSOCUG00000026379	TRMT12	92	44.365	Oryctolagus_cuniculus
ENSTRUG00000011548	trmt12	99	66.169	ENSORLG00000001280	trmt12	99	66.169	Oryzias_latipes
ENSTRUG00000011548	trmt12	99	66.169	ENSORLG00020000708	trmt12	99	66.169	Oryzias_latipes_hni
ENSTRUG00000011548	trmt12	99	66.667	ENSORLG00015012344	trmt12	99	66.667	Oryzias_latipes_hsok
ENSTRUG00000011548	trmt12	99	65.099	ENSOMEG00000015267	trmt12	98	65.099	Oryzias_melastigma
ENSTRUG00000011548	trmt12	98	47.653	ENSOGAG00000015845	TRMT12	97	47.653	Otolemur_garnettii
ENSTRUG00000011548	trmt12	99	57.389	ENSPKIG00000004640	trmt12	99	58.396	Paramormyrops_kingsleyae
ENSTRUG00000011548	trmt12	58	56.877	ENSPSIG00000003476	TRMT12	99	56.877	Pelodiscus_sinensis
ENSTRUG00000011548	trmt12	99	63.930	ENSPMGG00000016356	trmt12	97	63.930	Periophthalmus_magnuspinnatus
ENSTRUG00000011548	trmt12	95	48.379	ENSPCIG00000002967	TRMT12	86	49.510	Phascolarctos_cinereus
ENSTRUG00000011548	trmt12	97	64.987	ENSPFOG00000016931	trmt12	95	67.263	Poecilia_formosa
ENSTRUG00000011548	trmt12	99	67.407	ENSPLAG00000020621	trmt12	99	67.407	Poecilia_latipinna
ENSTRUG00000011548	trmt12	99	67.407	ENSPMEG00000000818	trmt12	99	67.407	Poecilia_mexicana
ENSTRUG00000011548	trmt12	99	67.419	ENSPREG00000011621	trmt12	99	67.164	Poecilia_reticulata
ENSTRUG00000011548	trmt12	95	48.792	ENSPPYG00000018866	TRMT12	94	49.406	Pongo_abelii
ENSTRUG00000011548	trmt12	98	47.196	ENSPCAG00000000556	TRMT12	95	47.196	Procavia_capensis
ENSTRUG00000011548	trmt12	95	48.558	ENSPVAG00000009149	TRMT12	94	48.694	Pteropus_vampyrus
ENSTRUG00000011548	trmt12	94	67.792	ENSPNYG00000010696	trmt12	99	69.870	Pundamilia_nyererei
ENSTRUG00000011548	trmt12	99	55.238	ENSPNAG00000019028	trmt12	99	55.238	Pygocentrus_nattereri
ENSTRUG00000011548	trmt12	95	47.952	ENSRNOG00000008978	Trmt12	98	48.260	Rattus_norvegicus
ENSTRUG00000011548	trmt12	95	47.880	ENSSHAG00000003345	TRMT12	93	49.265	Sarcophilus_harrisii
ENSTRUG00000011548	trmt12	99	53.477	ENSSFOG00015006090	trmt12	99	53.477	Scleropages_formosus
ENSTRUG00000011548	trmt12	99	72.818	ENSSMAG00000013247	trmt12	99	72.818	Scophthalmus_maximus
ENSTRUG00000011548	trmt12	99	74.074	ENSSDUG00000006168	trmt12	99	74.074	Seriola_dumerili
ENSTRUG00000011548	trmt12	99	74.074	ENSSLDG00000025007	trmt12	99	74.074	Seriola_lalandi_dorsalis
ENSTRUG00000011548	trmt12	97	47.674	ENSSPUG00000005321	TRMT12	95	47.674	Sphenodon_punctatus
ENSTRUG00000011548	trmt12	99	72.208	ENSSPAG00000009435	trmt12	97	72.208	Stegastes_partitus
ENSTRUG00000011548	trmt12	98	49.519	ENSTGUG00000002280	TRMT12	99	49.398	Taeniopygia_guttata
ENSTRUG00000011548	trmt12	99	75.743	ENSTNIG00000016866	trmt12	99	75.743	Tetraodon_nigroviridis
ENSTRUG00000011548	trmt12	95	49.760	ENSUAMG00000002067	TRMT12	96	49.881	Ursus_americanus
ENSTRUG00000011548	trmt12	95	49.517	ENSVPAG00000006519	TRMT12	94	49.406	Vicugna_pacos
ENSTRUG00000011548	trmt12	95	48.558	ENSVVUG00000016790	TRMT12	93	48.558	Vulpes_vulpes
ENSTRUG00000011548	trmt12	98	49.751	ENSXETG00000009641	trmt12	95	49.751	Xenopus_tropicalis
ENSTRUG00000011548	trmt12	99	65.686	ENSXCOG00000016505	trmt12	99	65.686	Xiphophorus_couchianus
ENSTRUG00000011548	trmt12	99	66.256	ENSXMAG00000025318	trmt12	99	66.256	Xiphophorus_maculatus