EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000011685 (Gene tree)
Gene ID: 101061941
Gene Symbol: tnrc6c1
Alias: fj17e06|si:dkey-54k13.1|unm_sa1472|wu:fj17e06
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 27734 bases
Position: chr5:5739824-5767557
Accession: 101061941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000029530	RRM_1	PF00076.22	3.5e-05	1	1
ENSTRUP00000029531	RRM_1	PF00076.22	3.7e-05	1	1
ENSTRUP00000054582	RRM_1	PF00076.22	3.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000029647	-	4788	-	ENSTRUP00000029530	1595 (aa)	-	H2TXX1
ENSTRUT00000029648	-	7398	-	ENSTRUP00000029531	1692 (aa)	-	H2TXX2
ENSTRUT00000050499	-	7484	XM_011603903	ENSTRUP00000054582	1707 (aa)	XP_011602205	-

Gene Model

Click here to download ENSTRUG00000011685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000011685's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000011685	tnrc6c1	100	49.558	ENSG00000078687	TNRC6C	100	55.172	Homo_sapiens
ENSTRUG00000011685	tnrc6c1	99	79.541	ENSAPOG00000019749	tnrc6c1	99	81.305	Acanthochromis_polyacanthus
ENSTRUG00000011685	tnrc6c1	100	48.468	ENSAMEG00000013756	TNRC6C	76	53.766	Ailuropoda_melanoleuca
ENSTRUG00000011685	tnrc6c1	100	73.548	ENSACIG00000008075	tnrc6c1	99	70.457	Amphilophus_citrinellus
ENSTRUG00000011685	tnrc6c1	99	79.730	ENSAOCG00000023968	tnrc6c1	99	81.375	Amphiprion_ocellaris
ENSTRUG00000011685	tnrc6c1	99	79.730	ENSAPEG00000009020	tnrc6c1	99	81.375	Amphiprion_percula
ENSTRUG00000011685	tnrc6c1	94	61.459	ENSAPLG00000005456	TNRC6C	71	54.123	Anas_platyrhynchos
ENSTRUG00000011685	tnrc6c1	97	51.694	ENSACAG00000016198	TNRC6C	70	55.807	Anolis_carolinensis
ENSTRUG00000011685	tnrc6c1	100	49.283	ENSANAG00000021554	TNRC6C	87	51.611	Aotus_nancymaae
ENSTRUG00000011685	tnrc6c1	100	71.385	ENSACLG00000000424	tnrc6c1	99	70.435	Astatotilapia_calliptera
ENSTRUG00000011685	tnrc6c1	82	54.046	ENSBTAG00000018658	TNRC6C	87	51.854	Bos_taurus
ENSTRUG00000011685	tnrc6c1	100	49.281	ENSCJAG00000019431	TNRC6C	87	51.480	Callithrix_jacchus
ENSTRUG00000011685	tnrc6c1	97	49.687	ENSCAFG00000005224	TNRC6C	77	57.950	Canis_familiaris
ENSTRUG00000011685	tnrc6c1	97	49.376	ENSCAFG00020006661	TNRC6C	78	52.505	Canis_lupus_dingo
ENSTRUG00000011685	tnrc6c1	97	50.146	ENSCHIG00000026004	TNRC6C	78	55.348	Capra_hircus
ENSTRUG00000011685	tnrc6c1	97	50.625	ENSTSYG00000005403	TNRC6C	79	55.267	Carlito_syrichta
ENSTRUG00000011685	tnrc6c1	78	49.375	ENSCAPG00000007307	TNRC6C	71	48.821	Cavia_aperea
ENSTRUG00000011685	tnrc6c1	78	53.960	ENSCPOG00000000467	TNRC6C	78	52.929	Cavia_porcellus
ENSTRUG00000011685	tnrc6c1	100	50.168	ENSCCAG00000030524	TNRC6C	86	52.764	Cebus_capucinus
ENSTRUG00000011685	tnrc6c1	100	49.834	ENSCATG00000033135	TNRC6C	79	54.986	Cercocebus_atys
ENSTRUG00000011685	tnrc6c1	100	49.752	ENSCLAG00000011139	TNRC6C	70	54.366	Chinchilla_lanigera
ENSTRUG00000011685	tnrc6c1	100	49.779	ENSCSAG00000005167	TNRC6C	70	54.916	Chlorocebus_sabaeus
ENSTRUG00000011685	tnrc6c1	69	63.780	ENSCHOG00000000088	TNRC6C	60	62.400	Choloepus_hoffmanni
ENSTRUG00000011685	tnrc6c1	97	51.690	ENSCPBG00000027960	TNRC6C	80	55.989	Chrysemys_picta_bellii
ENSTRUG00000011685	tnrc6c1	100	49.945	ENSCANG00000041771	TNRC6C	79	54.986	Colobus_angolensis_palliatus
ENSTRUG00000011685	tnrc6c1	100	48.840	ENSCGRG00001022686	Tnrc6c	78	52.713	Cricetulus_griseus_chok1gshd
ENSTRUG00000011685	tnrc6c1	100	49.112	ENSCGRG00000018041	Tnrc6c	78	52.713	Cricetulus_griseus_crigri
ENSTRUG00000011685	tnrc6c1	98	76.404	ENSCSEG00000012744	tnrc6c1	95	75.399	Cynoglossus_semilaevis
ENSTRUG00000011685	tnrc6c1	91	73.394	ENSDARG00000076847	tnrc6c1	99	60.593	Danio_rerio
ENSTRUG00000011685	tnrc6c1	100	49.440	ENSDNOG00000003247	TNRC6C	89	52.732	Dasypus_novemcinctus
ENSTRUG00000011685	tnrc6c1	100	47.004	ENSDORG00000004558	Tnrc6c	80	51.002	Dipodomys_ordii
ENSTRUG00000011685	tnrc6c1	91	53.433	ENSETEG00000005527	TNRC6C	82	54.281	Echinops_telfairi
ENSTRUG00000011685	tnrc6c1	97	49.461	ENSEASG00005004799	TNRC6C	79	53.479	Equus_asinus_asinus
ENSTRUG00000011685	tnrc6c1	97	50.312	ENSECAG00000012486	TNRC6C	71	54.705	Equus_caballus
ENSTRUG00000011685	tnrc6c1	92	53.974	ENSEEUG00000010008	TNRC6C	71	54.401	Erinaceus_europaeus
ENSTRUG00000011685	tnrc6c1	97	48.984	ENSFCAG00000028358	TNRC6C	80	52.285	Felis_catus
ENSTRUG00000011685	tnrc6c1	100	48.647	ENSFALG00000000848	TNRC6C	80	53.393	Ficedula_albicollis
ENSTRUG00000011685	tnrc6c1	100	49.310	ENSFDAG00000010368	TNRC6C	93	54.193	Fukomys_damarensis
ENSTRUG00000011685	tnrc6c1	100	72.892	ENSFHEG00000002936	tnrc6c1	99	74.233	Fundulus_heteroclitus
ENSTRUG00000011685	tnrc6c1	100	50.816	ENSGALG00000001725	TNRC6C	78	56.034	Gallus_gallus
ENSTRUG00000011685	tnrc6c1	98	76.359	ENSGAFG00000019019	tnrc6c1	100	76.045	Gambusia_affinis
ENSTRUG00000011685	tnrc6c1	100	72.589	ENSGACG00000012320	tnrc6c1	92	71.970	Gasterosteus_aculeatus
ENSTRUG00000011685	tnrc6c1	97	51.259	ENSGAGG00000022043	TNRC6C	77	55.024	Gopherus_agassizii
ENSTRUG00000011685	tnrc6c1	100	49.418	ENSGGOG00000011304	TNRC6C	87	54.469	Gorilla_gorilla
ENSTRUG00000011685	tnrc6c1	99	76.733	ENSHBUG00000010846	tnrc6c1	100	77.715	Haplochromis_burtoni
ENSTRUG00000011685	tnrc6c1	100	48.924	ENSHGLG00000004809	TNRC6C	70	53.830	Heterocephalus_glaber_female
ENSTRUG00000011685	tnrc6c1	100	48.460	ENSHGLG00100012597	TNRC6C	70	53.319	Heterocephalus_glaber_male
ENSTRUG00000011685	tnrc6c1	100	60.059	ENSIPUG00000000818	tnrc6c1	94	60.596	Ictalurus_punctatus
ENSTRUG00000011685	tnrc6c1	100	49.231	ENSSTOG00000009101	TNRC6C	76	54.276	Ictidomys_tridecemlineatus
ENSTRUG00000011685	tnrc6c1	82	52.888	ENSJJAG00000017055	Tnrc6c	87	52.698	Jaculus_jaculus
ENSTRUG00000011685	tnrc6c1	100	75.217	ENSKMAG00000021023	tnrc6c1	100	72.659	Kryptolebias_marmoratus
ENSTRUG00000011685	tnrc6c1	94	58.738	ENSLACG00000015283	TNRC6C	86	64.324	Latimeria_chalumnae
ENSTRUG00000011685	tnrc6c1	99	75.000	ENSLOCG00000013377	tnrc6c1	90	74.706	Lepisosteus_oculatus
ENSTRUG00000011685	tnrc6c1	97	49.370	ENSLAFG00000011122	TNRC6C	75	53.546	Loxodonta_africana
ENSTRUG00000011685	tnrc6c1	100	49.834	ENSMFAG00000043943	TNRC6C	79	54.986	Macaca_fascicularis
ENSTRUG00000011685	tnrc6c1	100	49.890	ENSMMUG00000011924	TNRC6C	79	53.544	Macaca_mulatta
ENSTRUG00000011685	tnrc6c1	100	49.505	ENSMNEG00000030405	TNRC6C	79	53.474	Macaca_nemestrina
ENSTRUG00000011685	tnrc6c1	100	49.834	ENSMLEG00000033436	TNRC6C	79	54.986	Mandrillus_leucophaeus
ENSTRUG00000011685	tnrc6c1	99	79.245	ENSMAMG00000023613	tnrc6c1	99	79.599	Mastacembelus_armatus
ENSTRUG00000011685	tnrc6c1	100	75.120	ENSMZEG00005010920	tnrc6c1	99	75.590	Maylandia_zebra
ENSTRUG00000011685	tnrc6c1	100	45.849	ENSMGAG00000003906	TNRC6C	71	48.881	Meleagris_gallopavo
ENSTRUG00000011685	tnrc6c1	97	48.672	ENSMAUG00000021618	Tnrc6c	79	52.421	Mesocricetus_auratus
ENSTRUG00000011685	tnrc6c1	100	49.532	ENSMICG00000003952	TNRC6C	88	53.172	Microcebus_murinus
ENSTRUG00000011685	tnrc6c1	100	48.677	ENSMOCG00000015879	Tnrc6c	76	53.259	Microtus_ochrogaster
ENSTRUG00000011685	tnrc6c1	100	80.482	ENSMMOG00000005203	tnrc6c1	100	80.621	Mola_mola
ENSTRUG00000011685	tnrc6c1	97	49.660	ENSMODG00000001785	TNRC6C	70	53.592	Monodelphis_domestica
ENSTRUG00000011685	tnrc6c1	100	48.702	MGP_CAROLIEiJ_G0017465	Tnrc6c	76	52.805	Mus_caroli
ENSTRUG00000011685	tnrc6c1	97	49.432	ENSMUSG00000025571	Tnrc6c	76	53.061	Mus_musculus
ENSTRUG00000011685	tnrc6c1	100	48.813	MGP_PahariEiJ_G0018593	Tnrc6c	77	52.774	Mus_pahari
ENSTRUG00000011685	tnrc6c1	97	49.262	MGP_SPRETEiJ_G0018309	Tnrc6c	76	52.850	Mus_spretus
ENSTRUG00000011685	tnrc6c1	97	49.857	ENSMPUG00000013348	TNRC6C	71	53.894	Mustela_putorius_furo
ENSTRUG00000011685	tnrc6c1	97	48.157	ENSMLUG00000014431	TNRC6C	71	52.365	Myotis_lucifugus
ENSTRUG00000011685	tnrc6c1	97	48.867	ENSNGAG00000012203	Tnrc6c	88	52.701	Nannospalax_galili
ENSTRUG00000011685	tnrc6c1	99	76.733	ENSNBRG00000005344	tnrc6c1	99	76.955	Neolamprologus_brichardi
ENSTRUG00000011685	tnrc6c1	100	47.944	ENSNLEG00000000047	TNRC6C	70	52.821	Nomascus_leucogenys
ENSTRUG00000011685	tnrc6c1	76	64.346	ENSMEUG00000005104	TNRC6C	88	66.786	Notamacropus_eugenii
ENSTRUG00000011685	tnrc6c1	100	49.475	ENSODEG00000012499	TNRC6C	79	54.035	Octodon_degus
ENSTRUG00000011685	tnrc6c1	100	74.157	ENSONIG00000002210	tnrc6c1	100	77.951	Oreochromis_niloticus
ENSTRUG00000011685	tnrc6c1	78	51.838	ENSOANG00000009758	-	67	52.138	Ornithorhynchus_anatinus
ENSTRUG00000011685	tnrc6c1	99	72.919	ENSORLG00000009837	tnrc6c1	100	80.220	Oryzias_latipes
ENSTRUG00000011685	tnrc6c1	100	71.789	ENSORLG00020016510	tnrc6c1	100	72.965	Oryzias_latipes_hni
ENSTRUG00000011685	tnrc6c1	79	68.971	ENSORLG00015000171	tnrc6c1	98	70.071	Oryzias_latipes_hsok
ENSTRUG00000011685	tnrc6c1	99	73.780	ENSOMEG00000000357	tnrc6c1	99	72.701	Oryzias_melastigma
ENSTRUG00000011685	tnrc6c1	97	48.719	ENSOGAG00000007197	TNRC6C	79	53.061	Otolemur_garnettii
ENSTRUG00000011685	tnrc6c1	93	48.408	ENSOARG00000006041	TNRC6C	68	54.021	Ovis_aries
ENSTRUG00000011685	tnrc6c1	100	49.530	ENSPPAG00000027160	TNRC6C	87	54.673	Pan_paniscus
ENSTRUG00000011685	tnrc6c1	97	49.266	ENSPPRG00000018881	TNRC6C	80	52.493	Panthera_pardus
ENSTRUG00000011685	tnrc6c1	85	55.071	ENSPTIG00000008791	TNRC6C	72	53.699	Panthera_tigris_altaica
ENSTRUG00000011685	tnrc6c1	100	49.585	ENSPTRG00000009699	TNRC6C	87	54.743	Pan_troglodytes
ENSTRUG00000011685	tnrc6c1	100	49.560	ENSPANG00000019994	TNRC6C	79	53.657	Papio_anubis
ENSTRUG00000011685	tnrc6c1	100	56.999	ENSPKIG00000005428	tnrc6c1	100	57.497	Paramormyrops_kingsleyae
ENSTRUG00000011685	tnrc6c1	100	49.272	ENSPSIG00000018069	TNRC6C	77	54.029	Pelodiscus_sinensis
ENSTRUG00000011685	tnrc6c1	93	72.495	ENSPMGG00000022911	tnrc6c1	98	74.694	Periophthalmus_magnuspinnatus
ENSTRUG00000011685	tnrc6c1	99	47.746	ENSPEMG00000009785	Tnrc6c	78	50.385	Peromyscus_maniculatus_bairdii
ENSTRUG00000011685	tnrc6c1	100	73.903	ENSPFOG00000012560	tnrc6c1	99	71.690	Poecilia_formosa
ENSTRUG00000011685	tnrc6c1	100	71.858	ENSPLAG00000021055	tnrc6c1	100	76.012	Poecilia_latipinna
ENSTRUG00000011685	tnrc6c1	100	49.640	ENSPPYG00000008679	TNRC6C	86	51.997	Pongo_abelii
ENSTRUG00000011685	tnrc6c1	65	66.059	ENSPCAG00000012510	TNRC6C	65	65.604	Procavia_capensis
ENSTRUG00000011685	tnrc6c1	97	50.283	ENSPCOG00000021451	TNRC6C	80	54.589	Propithecus_coquereli
ENSTRUG00000011685	tnrc6c1	74	64.286	ENSPVAG00000002008	TNRC6C	72	62.097	Pteropus_vampyrus
ENSTRUG00000011685	tnrc6c1	100	75.181	ENSPNYG00000014477	tnrc6c1	100	77.833	Pundamilia_nyererei
ENSTRUG00000011685	tnrc6c1	79	53.762	ENSRNOG00000022395	Tnrc6c	87	52.274	Rattus_norvegicus
ENSTRUG00000011685	tnrc6c1	100	50.000	ENSRBIG00000027777	TNRC6C	87	55.056	Rhinopithecus_bieti
ENSTRUG00000011685	tnrc6c1	100	50.000	ENSRROG00000042912	TNRC6C	87	55.056	Rhinopithecus_roxellana
ENSTRUG00000011685	tnrc6c1	100	49.474	ENSSBOG00000023981	TNRC6C	87	52.099	Saimiri_boliviensis_boliviensis
ENSTRUG00000011685	tnrc6c1	56	64.414	ENSSHAG00000018330	-	100	64.520	Sarcophilus_harrisii
ENSTRUG00000011685	tnrc6c1	90	62.719	ENSSFOG00015004735	-	99	66.495	Scleropages_formosus
ENSTRUG00000011685	tnrc6c1	100	57.579	ENSSFOG00015006475	tnrc6c1	97	57.769	Scleropages_formosus
ENSTRUG00000011685	tnrc6c1	99	79.270	ENSSMAG00000012761	tnrc6c1	100	80.325	Scophthalmus_maximus
ENSTRUG00000011685	tnrc6c1	98	81.280	ENSSDUG00000002366	tnrc6c1	98	81.457	Seriola_dumerili
ENSTRUG00000011685	tnrc6c1	100	77.308	ENSSLDG00000025613	tnrc6c1	100	82.103	Seriola_lalandi_dorsalis
ENSTRUG00000011685	tnrc6c1	70	63.780	ENSSARG00000006816	TNRC6C	67	62.656	Sorex_araneus
ENSTRUG00000011685	tnrc6c1	85	53.753	ENSSPUG00000007341	TNRC6C	87	54.767	Sphenodon_punctatus
ENSTRUG00000011685	tnrc6c1	97	80.131	ENSSPAG00000014977	tnrc6c1	98	80.961	Stegastes_partitus
ENSTRUG00000011685	tnrc6c1	78	55.959	ENSSSCG00000034373	TNRC6C	79	53.986	Sus_scrofa
ENSTRUG00000011685	tnrc6c1	100	48.592	ENSTGUG00000007733	TNRC6C	76	53.539	Taeniopygia_guttata
ENSTRUG00000011685	tnrc6c1	100	83.110	ENSTNIG00000005273	tnrc6c1	100	87.928	Tetraodon_nigroviridis
ENSTRUG00000011685	tnrc6c1	69	48.311	ENSTBEG00000005046	TNRC6C	100	48.036	Tupaia_belangeri
ENSTRUG00000011685	tnrc6c1	100	48.864	ENSTTRG00000010828	TNRC6C	93	53.819	Tursiops_truncatus
ENSTRUG00000011685	tnrc6c1	100	47.674	ENSUMAG00000013614	TNRC6C	71	53.024	Ursus_maritimus
ENSTRUG00000011685	tnrc6c1	55	49.418	ENSVPAG00000006765	-	99	50.647	Vicugna_pacos
ENSTRUG00000011685	tnrc6c1	97	50.116	ENSVVUG00000015268	TNRC6C	78	55.428	Vulpes_vulpes
ENSTRUG00000011685	tnrc6c1	100	47.683	ENSXETG00000019470	tnrc6c	75	53.116	Xenopus_tropicalis
ENSTRUG00000011685	tnrc6c1	99	76.720	ENSXMAG00000025971	tnrc6c1	100	76.357	Xiphophorus_maculatus