EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000011888 (Gene tree)
Gene ID: 101079853
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein MEX3B-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4202 bases
Position: chr21:8027301-8031502
Accession: 101079853
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000030048	KH_1	PF00013.29	7.1e-26	1	2
ENSTRUP00000030048	KH_1	PF00013.29	7.1e-26	2	2
ENSTRUP00000030047	KH_1	PF00013.29	1.1e-25	1	2
ENSTRUP00000030047	KH_1	PF00013.29	1.1e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000030165	-	1782	-	ENSTRUP00000030048	593 (aa)	-	H2TZD9
ENSTRUT00000030164	-	2274	XM_011615573	ENSTRUP00000030047	681 (aa)	XP_011613875	H2TZD8

Gene Model

Click here to download ENSTRUG00000011888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000011888's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000011888	-	75	55.745	ENSTRUG00000000367	mex3b	92	54.176
ENSTRUG00000011888	-	53	77.512	ENSTRUG00000007986	MEX3D	72	77.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000011888	-	75	55.794	ENSAPOG00000006457	mex3b	97	54.292	Acanthochromis_polyacanthus
ENSTRUG00000011888	-	100	80.640	ENSAPOG00000024248	-	100	80.058	Acanthochromis_polyacanthus
ENSTRUG00000011888	-	75	54.936	ENSACIG00000017783	mex3b	89	50.888	Amphilophus_citrinellus
ENSTRUG00000011888	-	83	61.702	ENSACIG00000005655	-	94	67.145	Amphilophus_citrinellus
ENSTRUG00000011888	-	75	55.269	ENSAOCG00000023903	mex3b	91	51.690	Amphiprion_ocellaris
ENSTRUG00000011888	-	100	79.913	ENSAOCG00000021347	-	100	79.330	Amphiprion_ocellaris
ENSTRUG00000011888	-	75	56.009	ENSAPEG00000000263	mex3b	91	51.690	Amphiprion_percula
ENSTRUG00000011888	-	100	79.622	ENSAPEG00000003579	-	100	79.039	Amphiprion_percula
ENSTRUG00000011888	-	100	77.405	ENSATEG00000015187	-	100	77.259	Anabas_testudineus
ENSTRUG00000011888	-	75	53.620	ENSATEG00000012352	mex3b	91	51.297	Anabas_testudineus
ENSTRUG00000011888	-	100	75.328	ENSACLG00000017634	-	100	75.474	Astatotilapia_calliptera
ENSTRUG00000011888	-	77	53.200	ENSAMXG00000033615	mex3b	91	51.040	Astyanax_mexicanus
ENSTRUG00000011888	-	77	50.874	ENSCPBG00000007809	MEX3B	90	51.650	Chrysemys_picta_bellii
ENSTRUG00000011888	-	79	47.467	ENSCSEG00000005852	mex3b	55	65.169	Cynoglossus_semilaevis
ENSTRUG00000011888	-	87	71.026	ENSCSEG00000006809	-	90	70.667	Cynoglossus_semilaevis
ENSTRUG00000011888	-	100	61.295	ENSCSEG00000011533	-	99	63.511	Cynoglossus_semilaevis
ENSTRUG00000011888	-	100	75.403	ENSCVAG00000006043	-	99	75.256	Cyprinodon_variegatus
ENSTRUG00000011888	-	77	53.996	ENSDARG00000058369	mex3b	91	53.175	Danio_rerio
ENSTRUG00000011888	-	61	72.692	ENSEBUG00000013015	mex3b	61	74.576	Eptatretus_burgeri
ENSTRUG00000011888	-	75	52.101	ENSEBUG00000007080	mex3b	91	52.147	Eptatretus_burgeri
ENSTRUG00000011888	-	64	69.286	ENSEASG00005007105	MEX3B	60	78.924	Equus_asinus_asinus
ENSTRUG00000011888	-	56	75.000	ENSECAG00000013497	MEX3B	90	49.548	Equus_caballus
ENSTRUG00000011888	-	75	52.599	ENSELUG00000002503	mex3b	90	51.367	Esox_lucius
ENSTRUG00000011888	-	100	74.638	ENSFHEG00000022740	-	100	74.203	Fundulus_heteroclitus
ENSTRUG00000011888	-	76	68.724	ENSGMOG00000005826	-	100	68.775	Gadus_morhua
ENSTRUG00000011888	-	94	74.383	ENSGAFG00000013694	-	98	72.840	Gambusia_affinis
ENSTRUG00000011888	-	73	75.752	ENSGACG00000007490	-	100	75.940	Gasterosteus_aculeatus
ENSTRUG00000011888	-	77	51.807	ENSGAGG00000022839	MEX3B	90	53.659	Gopherus_agassizii
ENSTRUG00000011888	-	100	75.912	ENSHBUG00000010552	-	100	76.058	Haplochromis_burtoni
ENSTRUG00000011888	-	100	65.857	ENSHCOG00000010812	-	100	65.571	Hippocampus_comes
ENSTRUG00000011888	-	75	51.340	ENSHCOG00000007290	mex3b	68	82.412	Hippocampus_comes
ENSTRUG00000011888	-	100	73.401	ENSKMAG00000021181	MEX3B	99	73.988	Kryptolebias_marmoratus
ENSTRUG00000011888	-	87	73.453	ENSLBEG00000007607	-	92	74.388	Labrus_bergylta
ENSTRUG00000011888	-	78	50.593	ENSLBEG00000015131	mex3b	98	50.820	Labrus_bergylta
ENSTRUG00000011888	-	77	52.896	ENSLOCG00000012858	mex3b	91	52.047	Lepisosteus_oculatus
ENSTRUG00000011888	-	64	66.892	ENSLAFG00000006027	MEX3B	95	85.354	Loxodonta_africana
ENSTRUG00000011888	-	75	54.150	ENSMAMG00000011325	mex3b	91	52.695	Mastacembelus_armatus
ENSTRUG00000011888	-	100	75.882	ENSMAMG00000001370	-	100	75.882	Mastacembelus_armatus
ENSTRUG00000011888	-	100	75.328	ENSMZEG00005004908	-	100	75.474	Maylandia_zebra
ENSTRUG00000011888	-	84	76.145	ENSMMOG00000000120	-	100	77.199	Mola_mola
ENSTRUG00000011888	-	73	51.867	ENSMMOG00000015373	mex3b	88	49.895	Mola_mola
ENSTRUG00000011888	-	86	75.960	ENSMALG00000009589	-	96	76.433	Monopterus_albus
ENSTRUG00000011888	-	75	52.087	ENSMALG00000010929	mex3b	70	51.205	Monopterus_albus
ENSTRUG00000011888	-	81	70.125	ENSNBRG00000012485	-	98	70.125	Neolamprologus_brichardi
ENSTRUG00000011888	-	56	64.078	ENSOPRG00000009604	MEX3B	66	67.314	Ochotona_princeps
ENSTRUG00000011888	-	81	76.000	ENSONIG00000015037	-	99	76.000	Oreochromis_niloticus
ENSTRUG00000011888	-	100	74.419	ENSORLG00000004985	-	100	74.273	Oryzias_latipes
ENSTRUG00000011888	-	100	75.400	ENSORLG00020020174	-	100	75.400	Oryzias_latipes_hni
ENSTRUG00000011888	-	100	75.546	ENSORLG00015008649	-	100	75.546	Oryzias_latipes_hsok
ENSTRUG00000011888	-	100	75.656	ENSOMEG00000023339	-	100	76.093	Oryzias_melastigma
ENSTRUG00000011888	-	75	54.825	ENSPKIG00000019969	-	95	55.165	Paramormyrops_kingsleyae
ENSTRUG00000011888	-	75	51.946	ENSPKIG00000018385	mex3b	91	51.838	Paramormyrops_kingsleyae
ENSTRUG00000011888	-	75	52.577	ENSPMGG00000015808	mex3b	91	51.313	Periophthalmus_magnuspinnatus
ENSTRUG00000011888	-	83	73.320	ENSPMGG00000017559	-	97	71.591	Periophthalmus_magnuspinnatus
ENSTRUG00000011888	-	75	42.941	ENSPMAG00000000125	mex3b	99	42.745	Petromyzon_marinus
ENSTRUG00000011888	-	100	76.343	ENSPFOG00000018999	-	99	74.891	Poecilia_formosa
ENSTRUG00000011888	-	100	76.343	ENSPLAG00000002303	-	99	74.891	Poecilia_latipinna
ENSTRUG00000011888	-	100	76.197	ENSPMEG00000006448	-	99	74.746	Poecilia_mexicana
ENSTRUG00000011888	-	100	76.087	ENSPREG00000018559	-	99	74.348	Poecilia_reticulata
ENSTRUG00000011888	-	100	75.912	ENSPNYG00000010418	-	100	76.058	Pundamilia_nyererei
ENSTRUG00000011888	-	61	73.180	ENSPNAG00000002109	mex3b	86	72.031	Pygocentrus_nattereri
ENSTRUG00000011888	-	52	72.556	ENSSFOG00015016308	mex3b	69	71.429	Scleropages_formosus
ENSTRUG00000011888	-	77	52.459	ENSSFOG00015016667	mex3b	88	51.943	Scleropages_formosus
ENSTRUG00000011888	-	75	52.756	ENSSMAG00000017078	mex3b	91	51.000	Scophthalmus_maximus
ENSTRUG00000011888	-	71	78.889	ENSSMAG00000001075	-	100	80.222	Scophthalmus_maximus
ENSTRUG00000011888	-	100	79.740	ENSSDUG00000022255	-	100	80.318	Seriola_dumerili
ENSTRUG00000011888	-	80	50.826	ENSSDUG00000013254	mex3b	53	65.306	Seriola_dumerili
ENSTRUG00000011888	-	80	50.826	ENSSLDG00000014620	mex3b	53	65.306	Seriola_lalandi_dorsalis
ENSTRUG00000011888	-	100	79.424	ENSSLDG00000024917	-	100	79.424	Seriola_lalandi_dorsalis
ENSTRUG00000011888	-	93	78.788	ENSSPAG00000002581	-	96	78.636	Stegastes_partitus
ENSTRUG00000011888	-	75	57.609	ENSSPAG00000011854	mex3b	90	56.863	Stegastes_partitus
ENSTRUG00000011888	-	75	54.184	ENSTNIG00000003398	mex3b	90	52.350	Tetraodon_nigroviridis
ENSTRUG00000011888	-	77	55.439	ENSXETG00000027601	mex3b	90	53.926	Xenopus_tropicalis
ENSTRUG00000011888	-	82	69.489	ENSXCOG00000005190	-	97	72.792	Xiphophorus_couchianus
ENSTRUG00000011888	-	100	76.197	ENSXMAG00000015283	-	99	74.746	Xiphophorus_maculatus