EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000012005 (Gene tree)
Gene ID: 101071972
Gene Symbol: utp6
Alias: zgc:55648
Full Name: UTP6%2C small subunit processome component
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 7565 bases
Position: chr17:1278275-1285839
Accession: 101071972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000030381	U3_assoc_6	PF08640.11	3.4e-22	1	1
ENSTRUP00000053810	U3_assoc_6	PF08640.11	3.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000030498	-	3967	XM_003971950	ENSTRUP00000030381	594 (aa)	XP_003971999	H2U0C2
ENSTRUT00000057330	-	4057	XM_011612345	ENSTRUP00000053810	594 (aa)	XP_011610647	UPI0000361DAB

Gene Model

Click here to download ENSTRUG00000012005's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000012005's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000012005	utp6	100	55.537	ENSG00000108651	UTP6	99	55.537	Homo_sapiens
ENSTRUG00000012005	utp6	100	83.333	ENSAPOG00000000435	utp6	99	83.333	Acanthochromis_polyacanthus
ENSTRUG00000012005	utp6	99	55.201	ENSAMEG00000005443	UTP6	99	55.201	Ailuropoda_melanoleuca
ENSTRUG00000012005	utp6	100	79.798	ENSACIG00000004124	utp6	99	79.798	Amphilophus_citrinellus
ENSTRUG00000012005	utp6	100	82.997	ENSAOCG00000016812	utp6	99	82.997	Amphiprion_ocellaris
ENSTRUG00000012005	utp6	100	82.997	ENSAPEG00000023565	utp6	99	82.997	Amphiprion_percula
ENSTRUG00000012005	utp6	100	83.670	ENSATEG00000003401	utp6	99	83.670	Anabas_testudineus
ENSTRUG00000012005	utp6	99	55.668	ENSAPLG00000005821	UTP6	98	55.668	Anas_platyrhynchos
ENSTRUG00000012005	utp6	100	56.879	ENSACAG00000009472	UTP6	99	56.879	Anolis_carolinensis
ENSTRUG00000012005	utp6	100	55.369	ENSANAG00000034603	UTP6	99	55.369	Aotus_nancymaae
ENSTRUG00000012005	utp6	100	82.828	ENSACLG00000006728	utp6	99	82.828	Astatotilapia_calliptera
ENSTRUG00000012005	utp6	100	68.855	ENSAMXG00000009478	utp6	99	68.855	Astyanax_mexicanus
ENSTRUG00000012005	utp6	99	51.678	ENSBTAG00000003769	-	98	51.678	Bos_taurus
ENSTRUG00000012005	utp6	99	52.852	ENSBTAG00000015612	UTP6	99	52.852	Bos_taurus
ENSTRUG00000012005	utp6	100	55.201	ENSCJAG00000014115	UTP6	99	55.201	Callithrix_jacchus
ENSTRUG00000012005	utp6	100	55.611	ENSCAFG00000018507	UTP6	99	55.611	Canis_familiaris
ENSTRUG00000012005	utp6	100	55.611	ENSCAFG00020014678	UTP6	99	55.611	Canis_lupus_dingo
ENSTRUG00000012005	utp6	99	53.356	ENSCHIG00000009726	-	99	53.356	Capra_hircus
ENSTRUG00000012005	utp6	99	53.356	ENSCHIG00000017954	-	99	53.356	Capra_hircus
ENSTRUG00000012005	utp6	100	50.754	ENSTSYG00000002202	UTP6	99	50.754	Carlito_syrichta
ENSTRUG00000012005	utp6	87	48.738	ENSCAPG00000017595	UTP6	93	48.738	Cavia_aperea
ENSTRUG00000012005	utp6	100	55.872	ENSCPOG00000014294	UTP6	100	55.872	Cavia_porcellus
ENSTRUG00000012005	utp6	100	51.174	ENSCCAG00000033318	-	99	51.174	Cebus_capucinus
ENSTRUG00000012005	utp6	100	55.109	ENSCATG00000034868	UTP6	99	55.109	Cercocebus_atys
ENSTRUG00000012005	utp6	100	55.537	ENSCLAG00000007274	UTP6	99	55.537	Chinchilla_lanigera
ENSTRUG00000012005	utp6	100	54.606	ENSCSAG00000006595	UTP6	99	54.606	Chlorocebus_sabaeus
ENSTRUG00000012005	utp6	88	46.014	ENSCHOG00000010940	-	88	46.014	Choloepus_hoffmanni
ENSTRUG00000012005	utp6	100	58.221	ENSCPBG00000004652	UTP6	99	58.221	Chrysemys_picta_bellii
ENSTRUG00000012005	utp6	99	30.782	ENSCING00000022947	-	99	30.782	Ciona_intestinalis
ENSTRUG00000012005	utp6	88	39.695	ENSCANG00000031141	UTP6	89	39.695	Colobus_angolensis_palliatus
ENSTRUG00000012005	utp6	100	54.774	ENSCGRG00001000046	Utp6	100	54.774	Cricetulus_griseus_chok1gshd
ENSTRUG00000012005	utp6	95	53.357	ENSCGRG00000011543	Utp6	100	53.357	Cricetulus_griseus_crigri
ENSTRUG00000012005	utp6	100	73.109	ENSCSEG00000013422	utp6	99	85.246	Cynoglossus_semilaevis
ENSTRUG00000012005	utp6	100	80.303	ENSCVAG00000020322	utp6	99	80.303	Cyprinodon_variegatus
ENSTRUG00000012005	utp6	100	67.508	ENSDARG00000098433	utp6	100	77.348	Danio_rerio
ENSTRUG00000012005	utp6	100	54.606	ENSDNOG00000037018	UTP6	99	54.606	Dasypus_novemcinctus
ENSTRUG00000012005	utp6	95	53.451	ENSDORG00000003843	Utp6	99	55.699	Dipodomys_ordii
ENSTRUG00000012005	utp6	100	55.946	ENSEASG00005010870	UTP6	99	55.946	Equus_asinus_asinus
ENSTRUG00000012005	utp6	100	55.946	ENSECAG00000022217	UTP6	99	55.946	Equus_caballus
ENSTRUG00000012005	utp6	100	72.391	ENSELUG00000006618	utp6	99	72.391	Esox_lucius
ENSTRUG00000012005	utp6	100	53.589	ENSFCAG00000015795	UTP6	99	53.589	Felis_catus
ENSTRUG00000012005	utp6	100	57.550	ENSFALG00000002282	UTP6	99	57.550	Ficedula_albicollis
ENSTRUG00000012005	utp6	100	55.537	ENSFDAG00000019506	UTP6	100	55.537	Fukomys_damarensis
ENSTRUG00000012005	utp6	100	78.620	ENSFHEG00000010373	utp6	99	78.620	Fundulus_heteroclitus
ENSTRUG00000012005	utp6	100	72.054	ENSGMOG00000011958	utp6	99	72.054	Gadus_morhua
ENSTRUG00000012005	utp6	100	57.383	ENSGALG00000003260	UTP6	99	57.383	Gallus_gallus
ENSTRUG00000012005	utp6	100	81.650	ENSGAFG00000008505	utp6	99	81.650	Gambusia_affinis
ENSTRUG00000012005	utp6	100	80.471	ENSGACG00000019424	utp6	99	80.471	Gasterosteus_aculeatus
ENSTRUG00000012005	utp6	100	58.221	ENSGAGG00000004820	UTP6	99	58.221	Gopherus_agassizii
ENSTRUG00000012005	utp6	100	55.872	ENSGGOG00000013569	UTP6	99	55.872	Gorilla_gorilla
ENSTRUG00000012005	utp6	99	44.781	ENSGGOG00000026003	-	99	44.781	Gorilla_gorilla
ENSTRUG00000012005	utp6	100	82.828	ENSHBUG00000018668	utp6	99	82.828	Haplochromis_burtoni
ENSTRUG00000012005	utp6	99	51.265	ENSHGLG00000008642	-	99	51.265	Heterocephalus_glaber_female
ENSTRUG00000012005	utp6	100	55.537	ENSHGLG00000010332	UTP6	100	55.537	Heterocephalus_glaber_female
ENSTRUG00000012005	utp6	100	52.685	ENSHGLG00100014271	-	100	52.685	Heterocephalus_glaber_male
ENSTRUG00000012005	utp6	95	52.465	ENSHGLG00100006047	-	99	52.465	Heterocephalus_glaber_male
ENSTRUG00000012005	utp6	100	75.421	ENSHCOG00000017277	utp6	99	75.421	Hippocampus_comes
ENSTRUG00000012005	utp6	100	66.835	ENSIPUG00000022587	Utp6	99	66.835	Ictalurus_punctatus
ENSTRUG00000012005	utp6	100	56.187	ENSSTOG00000015875	UTP6	100	56.187	Ictidomys_tridecemlineatus
ENSTRUG00000012005	utp6	100	81.481	ENSKMAG00000021631	utp6	99	81.481	Kryptolebias_marmoratus
ENSTRUG00000012005	utp6	100	82.997	ENSLBEG00000002115	utp6	99	82.997	Labrus_bergylta
ENSTRUG00000012005	utp6	100	61.745	ENSLACG00000017158	UTP6	99	61.745	Latimeria_chalumnae
ENSTRUG00000012005	utp6	92	64.954	ENSLOCG00000013797	utp6	90	64.954	Lepisosteus_oculatus
ENSTRUG00000012005	utp6	100	54.941	ENSLAFG00000013008	UTP6	99	54.941	Loxodonta_africana
ENSTRUG00000012005	utp6	85	45.928	ENSMFAG00000041904	-	96	45.928	Macaca_fascicularis
ENSTRUG00000012005	utp6	100	55.109	ENSMFAG00000038842	UTP6	99	55.109	Macaca_fascicularis
ENSTRUG00000012005	utp6	100	55.109	ENSMMUG00000020403	UTP6	99	55.109	Macaca_mulatta
ENSTRUG00000012005	utp6	100	55.109	ENSMNEG00000039480	UTP6	99	55.109	Macaca_nemestrina
ENSTRUG00000012005	utp6	99	44.128	ENSMLEG00000039364	-	99	44.128	Mandrillus_leucophaeus
ENSTRUG00000012005	utp6	100	49.916	ENSMLEG00000032174	UTP6	99	49.916	Mandrillus_leucophaeus
ENSTRUG00000012005	utp6	100	82.323	ENSMAMG00000002228	utp6	99	82.323	Mastacembelus_armatus
ENSTRUG00000012005	utp6	100	82.828	ENSMZEG00005023895	utp6	99	82.828	Maylandia_zebra
ENSTRUG00000012005	utp6	95	55.556	ENSMGAG00000008111	UTP6	99	55.556	Meleagris_gallopavo
ENSTRUG00000012005	utp6	100	54.941	ENSMAUG00000021895	Utp6	100	54.941	Mesocricetus_auratus
ENSTRUG00000012005	utp6	100	53.769	ENSMICG00000002632	UTP6	99	53.769	Microcebus_murinus
ENSTRUG00000012005	utp6	100	54.774	ENSMOCG00000014163	Utp6	100	54.774	Microtus_ochrogaster
ENSTRUG00000012005	utp6	100	80.976	ENSMMOG00000008653	utp6	99	83.051	Mola_mola
ENSTRUG00000012005	utp6	99	56.187	ENSMODG00000019206	UTP6	99	56.187	Monodelphis_domestica
ENSTRUG00000012005	utp6	100	81.650	ENSMALG00000021112	utp6	99	81.650	Monopterus_albus
ENSTRUG00000012005	utp6	100	54.774	MGP_CAROLIEiJ_G0016828	Utp6	100	54.774	Mus_caroli
ENSTRUG00000012005	utp6	100	54.941	ENSMUSG00000035575	Utp6	100	54.941	Mus_musculus
ENSTRUG00000012005	utp6	100	51.926	MGP_PahariEiJ_G0017965	Utp6	100	51.926	Mus_pahari
ENSTRUG00000012005	utp6	100	54.439	MGP_SPRETEiJ_G0017672	Utp6	100	54.439	Mus_spretus
ENSTRUG00000012005	utp6	100	54.195	ENSMPUG00000014581	UTP6	99	54.195	Mustela_putorius_furo
ENSTRUG00000012005	utp6	100	54.774	ENSMLUG00000016422	UTP6	99	54.774	Myotis_lucifugus
ENSTRUG00000012005	utp6	100	56.355	ENSNGAG00000015482	Utp6	100	56.355	Nannospalax_galili
ENSTRUG00000012005	utp6	100	82.828	ENSNBRG00000019714	utp6	99	82.828	Neolamprologus_brichardi
ENSTRUG00000012005	utp6	100	55.034	ENSNLEG00000011009	UTP6	99	55.034	Nomascus_leucogenys
ENSTRUG00000012005	utp6	89	58.156	ENSOPRG00000008446	-	89	58.156	Ochotona_princeps
ENSTRUG00000012005	utp6	66	63.248	ENSODEG00000011971	UTP6	99	63.248	Octodon_degus
ENSTRUG00000012005	utp6	100	82.323	ENSONIG00000018090	utp6	99	82.323	Oreochromis_niloticus
ENSTRUG00000012005	utp6	98	55.026	ENSOANG00000004279	UTP6	99	55.026	Ornithorhynchus_anatinus
ENSTRUG00000012005	utp6	100	54.439	ENSOCUG00000016980	UTP6	99	54.439	Oryctolagus_cuniculus
ENSTRUG00000012005	utp6	100	78.956	ENSORLG00000003546	utp6	64	78.956	Oryzias_latipes
ENSTRUG00000012005	utp6	100	78.956	ENSORLG00020010377	utp6	99	78.956	Oryzias_latipes_hni
ENSTRUG00000012005	utp6	100	78.620	ENSORLG00015008893	utp6	99	78.620	Oryzias_latipes_hsok
ENSTRUG00000012005	utp6	100	78.956	ENSOMEG00000017487	utp6	99	78.956	Oryzias_melastigma
ENSTRUG00000012005	utp6	88	48.762	ENSOGAG00000004511	UTP6	100	48.375	Otolemur_garnettii
ENSTRUG00000012005	utp6	99	53.523	ENSOARG00000013474	UTP6	99	53.523	Ovis_aries
ENSTRUG00000012005	utp6	99	45.791	ENSPPAG00000016895	-	99	45.791	Pan_paniscus
ENSTRUG00000012005	utp6	100	55.705	ENSPPAG00000038089	UTP6	99	55.705	Pan_paniscus
ENSTRUG00000012005	utp6	100	55.853	ENSPPRG00000001010	UTP6	99	55.853	Panthera_pardus
ENSTRUG00000012005	utp6	100	55.853	ENSPTIG00000013913	UTP6	99	55.853	Panthera_tigris_altaica
ENSTRUG00000012005	utp6	100	55.705	ENSPTRG00000008977	UTP6	99	55.705	Pan_troglodytes
ENSTRUG00000012005	utp6	99	45.791	ENSPTRG00000044798	-	99	45.791	Pan_troglodytes
ENSTRUG00000012005	utp6	99	44.202	ENSPANG00000034274	-	99	44.202	Papio_anubis
ENSTRUG00000012005	utp6	100	53.177	ENSPANG00000023113	UTP6	99	53.177	Papio_anubis
ENSTRUG00000012005	utp6	100	67.337	ENSPKIG00000004653	utp6	99	67.337	Paramormyrops_kingsleyae
ENSTRUG00000012005	utp6	100	57.311	ENSPSIG00000012435	UTP6	99	57.311	Pelodiscus_sinensis
ENSTRUG00000012005	utp6	100	79.293	ENSPMGG00000009548	utp6	99	79.293	Periophthalmus_magnuspinnatus
ENSTRUG00000012005	utp6	100	54.849	ENSPEMG00000014081	Utp6	100	54.849	Peromyscus_maniculatus_bairdii
ENSTRUG00000012005	utp6	93	44.760	ENSPMAG00000009561	utp6	99	44.760	Petromyzon_marinus
ENSTRUG00000012005	utp6	100	58.557	ENSPCIG00000029968	UTP6	86	58.557	Phascolarctos_cinereus
ENSTRUG00000012005	utp6	100	80.471	ENSPFOG00000013918	utp6	99	80.471	Poecilia_formosa
ENSTRUG00000012005	utp6	100	80.303	ENSPLAG00000017825	utp6	99	80.303	Poecilia_latipinna
ENSTRUG00000012005	utp6	100	80.640	ENSPMEG00000008133	utp6	99	80.640	Poecilia_mexicana
ENSTRUG00000012005	utp6	100	78.114	ENSPREG00000013108	utp6	99	78.114	Poecilia_reticulata
ENSTRUG00000012005	utp6	100	53.020	ENSPPYG00000008154	UTP6	99	53.020	Pongo_abelii
ENSTRUG00000012005	utp6	100	54.515	ENSPCOG00000010224	UTP6	99	54.515	Propithecus_coquereli
ENSTRUG00000012005	utp6	100	51.338	ENSPVAG00000015759	UTP6	99	51.338	Pteropus_vampyrus
ENSTRUG00000012005	utp6	100	82.492	ENSPNYG00000002290	utp6	99	82.492	Pundamilia_nyererei
ENSTRUG00000012005	utp6	100	67.172	ENSPNAG00000027370	utp6	99	67.172	Pygocentrus_nattereri
ENSTRUG00000012005	utp6	100	54.774	ENSRNOG00000014209	Utp6	100	54.774	Rattus_norvegicus
ENSTRUG00000012005	utp6	100	54.941	ENSRBIG00000020822	UTP6	99	54.941	Rhinopithecus_bieti
ENSTRUG00000012005	utp6	100	54.941	ENSRROG00000036838	UTP6	99	54.941	Rhinopithecus_roxellana
ENSTRUG00000012005	utp6	50	59.136	ENSSHAG00000018792	-	98	59.136	Sarcophilus_harrisii
ENSTRUG00000012005	utp6	100	68.174	ENSSFOG00015005978	utp6	99	68.174	Scleropages_formosus
ENSTRUG00000012005	utp6	100	82.997	ENSSMAG00000014772	utp6	99	82.997	Scophthalmus_maximus
ENSTRUG00000012005	utp6	100	84.512	ENSSDUG00000000329	utp6	99	84.512	Seriola_dumerili
ENSTRUG00000012005	utp6	100	83.333	ENSSLDG00000016724	utp6	99	83.333	Seriola_lalandi_dorsalis
ENSTRUG00000012005	utp6	99	48.658	ENSSARG00000010778	UTP6	99	48.658	Sorex_araneus
ENSTRUG00000012005	utp6	100	57.718	ENSSPUG00000005273	UTP6	99	57.718	Sphenodon_punctatus
ENSTRUG00000012005	utp6	100	81.650	ENSSPAG00000011871	utp6	99	81.650	Stegastes_partitus
ENSTRUG00000012005	utp6	100	56.114	ENSSSCG00000017745	UTP6	99	56.330	Sus_scrofa
ENSTRUG00000012005	utp6	100	57.047	ENSTGUG00000004999	UTP6	99	57.047	Taeniopygia_guttata
ENSTRUG00000012005	utp6	100	88.047	ENSTNIG00000003235	utp6	100	88.047	Tetraodon_nigroviridis
ENSTRUG00000012005	utp6	68	58.011	ENSTBEG00000005388	-	67	58.011	Tupaia_belangeri
ENSTRUG00000012005	utp6	100	54.941	ENSTTRG00000009911	UTP6	99	54.941	Tursiops_truncatus
ENSTRUG00000012005	utp6	99	55.369	ENSUMAG00000015139	UTP6	99	55.369	Ursus_maritimus
ENSTRUG00000012005	utp6	100	55.444	ENSVPAG00000005782	UTP6	99	55.444	Vicugna_pacos
ENSTRUG00000012005	utp6	100	55.444	ENSVVUG00000012238	UTP6	99	55.444	Vulpes_vulpes
ENSTRUG00000012005	utp6	99	50.084	ENSXETG00000020057	utp6	99	50.084	Xenopus_tropicalis
ENSTRUG00000012005	utp6	100	80.369	ENSXCOG00000013626	utp6	99	85.135	Xiphophorus_couchianus
ENSTRUG00000012005	utp6	100	80.471	ENSXMAG00000017414	utp6	99	80.471	Xiphophorus_maculatus