EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000012053 (Gene tree)
Gene ID: 101067408
Gene Symbol: ercc6l
Alias: si:ch211-278b8.3
Full Name: ERCC excision repair 6 like%2C spindle assembly checkpoint helicase
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 6179 bases
Position: chr21:2480387-2486565
Accession: 101067408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000055637	ResIII	PF04851.15	1.3e-10	1	1
ENSTRUP00000055114	ResIII	PF04851.15	1.4e-10	1	1
ENSTRUP00000030494	ResIII	PF04851.15	7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000049482	-	5045	XM_003974627	ENSTRUP00000055114	1309 (aa)	XP_003974676	UPI0005D21560
ENSTRUT00000030611	-	3234	-	ENSTRUP00000030494	1077 (aa)	-	H2U0N5
ENSTRUT00000052764	-	3648	-	ENSTRUP00000055637	1215 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000012053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000012053's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000012053	ercc6l	99	45.801	ENSG00000186871	ERCC6L	86	62.171	Homo_sapiens
ENSTRUG00000012053	ercc6l	56	78.917	ENSAPOG00000011392	ercc6l	99	78.917	Acanthochromis_polyacanthus
ENSTRUG00000012053	ercc6l	99	45.972	ENSAMEG00000005804	ERCC6L	69	60.829	Ailuropoda_melanoleuca
ENSTRUG00000012053	ercc6l	99	65.511	ENSAOCG00000016323	ercc6l	99	63.643	Amphiprion_ocellaris
ENSTRUG00000012053	ercc6l	90	77.827	ENSAOCG00000016285	-	91	76.753	Amphiprion_ocellaris
ENSTRUG00000012053	ercc6l	88	79.148	ENSAPEG00000022533	ERCC6L	97	79.148	Amphiprion_percula
ENSTRUG00000012053	ercc6l	99	63.942	ENSAPEG00000022499	ercc6l	98	76.138	Amphiprion_percula
ENSTRUG00000012053	ercc6l	99	63.869	ENSATEG00000012969	ercc6l	99	68.426	Anabas_testudineus
ENSTRUG00000012053	ercc6l	55	65.662	ENSACAG00000029354	-	93	64.555	Anolis_carolinensis
ENSTRUG00000012053	ercc6l	55	65.772	ENSACAG00000028866	-	90	64.653	Anolis_carolinensis
ENSTRUG00000012053	ercc6l	88	52.117	ENSACAG00000001226	-	95	51.163	Anolis_carolinensis
ENSTRUG00000012053	ercc6l	99	45.352	ENSANAG00000022378	ERCC6L	98	44.170	Aotus_nancymaae
ENSTRUG00000012053	ercc6l	96	77.983	ENSACLG00000006555	ercc6l	88	78.429	Astatotilapia_calliptera
ENSTRUG00000012053	ercc6l	66	66.337	ENSAMXG00000004780	ercc6l	66	66.460	Astyanax_mexicanus
ENSTRUG00000012053	ercc6l	99	47.295	ENSBTAG00000005607	ERCC6L	98	49.156	Bos_taurus
ENSTRUG00000012053	ercc6l	99	45.392	ENSCJAG00000022332	ERCC6L	98	44.089	Callithrix_jacchus
ENSTRUG00000012053	ercc6l	68	60.610	ENSCAFG00000023690	ERCC6L	67	60.610	Canis_familiaris
ENSTRUG00000012053	ercc6l	60	62.000	ENSCAFG00020021313	ERCC6L	66	62.000	Canis_lupus_dingo
ENSTRUG00000012053	ercc6l	99	47.965	ENSCHIG00000009967	ERCC6L	98	49.558	Capra_hircus
ENSTRUG00000012053	ercc6l	99	46.320	ENSTSYG00000013701	ERCC6L	98	43.913	Carlito_syrichta
ENSTRUG00000012053	ercc6l	99	45.876	ENSCPOG00000011407	ERCC6L	98	46.205	Cavia_porcellus
ENSTRUG00000012053	ercc6l	78	51.385	ENSCCAG00000023790	ERCC6L	98	44.080	Cebus_capucinus
ENSTRUG00000012053	ercc6l	99	45.312	ENSCATG00000038031	ERCC6L	98	47.359	Cercocebus_atys
ENSTRUG00000012053	ercc6l	68	59.682	ENSCLAG00000015218	-	98	44.361	Chinchilla_lanigera
ENSTRUG00000012053	ercc6l	66	60.690	ENSCLAG00000017785	-	98	45.734	Chinchilla_lanigera
ENSTRUG00000012053	ercc6l	99	45.596	ENSCSAG00000011173	ERCC6L	98	44.478	Chlorocebus_sabaeus
ENSTRUG00000012053	ercc6l	99	49.217	ENSCPBG00000011965	ERCC6L	82	70.498	Chrysemys_picta_bellii
ENSTRUG00000012053	ercc6l	99	45.304	ENSCANG00000016909	ERCC6L	98	46.827	Colobus_angolensis_palliatus
ENSTRUG00000012053	ercc6l	91	60.214	ENSCGRG00001016668	Ercc6l	98	43.806	Cricetulus_griseus_chok1gshd
ENSTRUG00000012053	ercc6l	91	60.214	ENSCGRG00000006223	Ercc6l	98	43.806	Cricetulus_griseus_crigri
ENSTRUG00000012053	ercc6l	100	59.658	ENSCSEG00000010268	ercc6l	100	59.834	Cynoglossus_semilaevis
ENSTRUG00000012053	ercc6l	57	75.108	ENSCVAG00000008090	ercc6l	96	75.108	Cyprinodon_variegatus
ENSTRUG00000012053	ercc6l	89	68.373	ENSDARG00000002479	ercc6l	86	65.122	Danio_rerio
ENSTRUG00000012053	ercc6l	99	46.450	ENSDNOG00000032356	ERCC6L	98	47.603	Dasypus_novemcinctus
ENSTRUG00000012053	ercc6l	99	46.760	ENSDORG00000007865	Ercc6l	87	58.407	Dipodomys_ordii
ENSTRUG00000012053	ercc6l	76	64.964	ENSETEG00000018007	ERCC6L	79	64.964	Echinops_telfairi
ENSTRUG00000012053	ercc6l	77	52.552	ENSEASG00005007025	ERCC6L	99	46.407	Equus_asinus_asinus
ENSTRUG00000012053	ercc6l	78	52.410	ENSECAG00000002513	ERCC6L	86	52.410	Equus_caballus
ENSTRUG00000012053	ercc6l	73	66.417	ENSEEUG00000015724	ERCC6L	59	66.417	Erinaceus_europaeus
ENSTRUG00000012053	ercc6l	99	57.270	ENSELUG00000007917	ercc6l	99	58.300	Esox_lucius
ENSTRUG00000012053	ercc6l	99	45.156	ENSFCAG00000012038	ERCC6L	98	47.841	Felis_catus
ENSTRUG00000012053	ercc6l	99	48.981	ENSFALG00000011797	ERCC6L	83	65.730	Ficedula_albicollis
ENSTRUG00000012053	ercc6l	97	59.181	ENSFDAG00000019713	ERCC6L	98	44.403	Fukomys_damarensis
ENSTRUG00000012053	ercc6l	96	73.692	ENSFHEG00000007205	ercc6l	96	72.549	Fundulus_heteroclitus
ENSTRUG00000012053	ercc6l	54	73.364	ENSFHEG00000007269	-	94	73.364	Fundulus_heteroclitus
ENSTRUG00000012053	ercc6l	88	50.737	ENSGALG00000003881	ERCC6L	64	66.341	Gallus_gallus
ENSTRUG00000012053	ercc6l	99	48.082	ENSGAGG00000018784	ERCC6L	82	67.969	Gopherus_agassizii
ENSTRUG00000012053	ercc6l	99	45.923	ENSGGOG00000022367	ERCC6L	98	47.639	Gorilla_gorilla
ENSTRUG00000012053	ercc6l	94	78.907	ENSHBUG00000007810	ercc6l	89	78.907	Haplochromis_burtoni
ENSTRUG00000012053	ercc6l	99	45.416	ENSHGLG00000016594	ERCC6L	98	43.639	Heterocephalus_glaber_female
ENSTRUG00000012053	ercc6l	99	45.416	ENSHGLG00100003339	ERCC6L	98	43.639	Heterocephalus_glaber_male
ENSTRUG00000012053	ercc6l	99	54.350	ENSHCOG00000001051	ercc6l	98	54.425	Hippocampus_comes
ENSTRUG00000012053	ercc6l	89	54.878	ENSIPUG00000016117	ercc6l	98	50.195	Ictalurus_punctatus
ENSTRUG00000012053	ercc6l	68	60.331	ENSJJAG00000022875	Ercc6l	83	60.331	Jaculus_jaculus
ENSTRUG00000012053	ercc6l	81	77.015	ENSKMAG00000011587	ercc6l	89	74.745	Kryptolebias_marmoratus
ENSTRUG00000012053	ercc6l	83	75.100	ENSLBEG00000000091	ercc6l	94	74.044	Labrus_bergylta
ENSTRUG00000012053	ercc6l	99	48.279	ENSLACG00000002634	ERCC6L	100	45.920	Latimeria_chalumnae
ENSTRUG00000012053	ercc6l	99	50.861	ENSLOCG00000013925	ercc6l	88	68.575	Lepisosteus_oculatus
ENSTRUG00000012053	ercc6l	99	46.296	ENSLAFG00000014985	ERCC6L	98	46.742	Loxodonta_africana
ENSTRUG00000012053	ercc6l	99	45.652	ENSMFAG00000045509	ERCC6L	91	47.485	Macaca_fascicularis
ENSTRUG00000012053	ercc6l	99	45.652	ENSMMUG00000012957	ERCC6L	99	47.256	Macaca_mulatta
ENSTRUG00000012053	ercc6l	99	45.699	ENSMNEG00000030867	ERCC6L	91	47.530	Macaca_nemestrina
ENSTRUG00000012053	ercc6l	99	45.541	ENSMLEG00000000190	ERCC6L	98	47.574	Mandrillus_leucophaeus
ENSTRUG00000012053	ercc6l	88	75.121	ENSMAMG00000018595	ercc6l	86	76.382	Mastacembelus_armatus
ENSTRUG00000012053	ercc6l	96	77.983	ENSMZEG00005001556	ercc6l	88	78.429	Maylandia_zebra
ENSTRUG00000012053	ercc6l	99	49.306	ENSMGAG00000002094	ERCC6L	68	66.346	Meleagris_gallopavo
ENSTRUG00000012053	ercc6l	90	59.865	ENSMAUG00000015560	Ercc6l	98	43.211	Mesocricetus_auratus
ENSTRUG00000012053	ercc6l	99	46.043	ENSMICG00000035415	ERCC6L	98	46.396	Microcebus_murinus
ENSTRUG00000012053	ercc6l	80	50.620	ENSMOCG00000021344	Ercc6l	98	46.174	Microtus_ochrogaster
ENSTRUG00000012053	ercc6l	100	64.613	ENSMMOG00000020762	ercc6l	95	92.143	Mola_mola
ENSTRUG00000012053	ercc6l	99	47.297	ENSMODG00000010916	ERCC6L	89	47.122	Monodelphis_domestica
ENSTRUG00000012053	ercc6l	73	79.479	ENSMALG00000003561	-	84	78.117	Monopterus_albus
ENSTRUG00000012053	ercc6l	100	62.715	ENSMALG00000003609	ercc6l	90	75.462	Monopterus_albus
ENSTRUG00000012053	ercc6l	99	44.618	MGP_CAROLIEiJ_G0033297	Ercc6l	98	43.167	Mus_caroli
ENSTRUG00000012053	ercc6l	99	45.000	ENSMUSG00000051220	Ercc6l	98	43.877	Mus_musculus
ENSTRUG00000012053	ercc6l	99	46.134	MGP_PahariEiJ_G0031835	Ercc6l	98	44.261	Mus_pahari
ENSTRUG00000012053	ercc6l	99	45.605	MGP_SPRETEiJ_G0034461	Ercc6l	98	43.792	Mus_spretus
ENSTRUG00000012053	ercc6l	99	46.829	ENSMPUG00000005291	ERCC6L	98	47.128	Mustela_putorius_furo
ENSTRUG00000012053	ercc6l	99	45.056	ENSMLUG00000011670	ERCC6L	99	47.110	Myotis_lucifugus
ENSTRUG00000012053	ercc6l	99	45.663	ENSNGAG00000021063	Ercc6l	86	58.008	Nannospalax_galili
ENSTRUG00000012053	ercc6l	99	45.920	ENSNLEG00000036284	ERCC6L	98	48.027	Nomascus_leucogenys
ENSTRUG00000012053	ercc6l	93	58.366	ENSODEG00000002328	ERCC6L	87	58.366	Octodon_degus
ENSTRUG00000012053	ercc6l	99	63.548	ENSONIG00000000589	ercc6l	99	61.916	Oreochromis_niloticus
ENSTRUG00000012053	ercc6l	99	46.632	ENSOANG00000014708	ERCC6L	88	50.742	Ornithorhynchus_anatinus
ENSTRUG00000012053	ercc6l	99	46.626	ENSOCUG00000008724	ERCC6L	99	47.494	Oryctolagus_cuniculus
ENSTRUG00000012053	ercc6l	51	83.631	ENSORLG00000024240	ercc6l	97	83.631	Oryzias_latipes
ENSTRUG00000012053	ercc6l	88	80.976	ENSORLG00020014999	ercc6l	97	62.331	Oryzias_latipes_hni
ENSTRUG00000012053	ercc6l	76	81.863	ENSOMEG00000009481	ercc6l	86	63.636	Oryzias_melastigma
ENSTRUG00000012053	ercc6l	66	60.561	ENSOGAG00000031470	-	87	60.561	Otolemur_garnettii
ENSTRUG00000012053	ercc6l	65	61.342	ENSOGAG00000034301	-	88	61.342	Otolemur_garnettii
ENSTRUG00000012053	ercc6l	99	47.441	ENSOARG00000005908	ERCC6L	99	49.382	Ovis_aries
ENSTRUG00000012053	ercc6l	99	45.714	ENSPPAG00000031861	ERCC6L	86	60.643	Pan_paniscus
ENSTRUG00000012053	ercc6l	99	44.965	ENSPPRG00000012408	ERCC6L	99	47.471	Panthera_pardus
ENSTRUG00000012053	ercc6l	99	45.714	ENSPTRG00000022023	ERCC6L	86	60.643	Pan_troglodytes
ENSTRUG00000012053	ercc6l	99	45.613	ENSPANG00000011598	ERCC6L	91	47.445	Papio_anubis
ENSTRUG00000012053	ercc6l	99	51.858	ENSPKIG00000022325	ercc6l	89	64.789	Paramormyrops_kingsleyae
ENSTRUG00000012053	ercc6l	91	63.373	ENSPSIG00000004789	ERCC6L	100	46.487	Pelodiscus_sinensis
ENSTRUG00000012053	ercc6l	94	59.595	ENSPMGG00000023343	ercc6l	96	62.409	Periophthalmus_magnuspinnatus
ENSTRUG00000012053	ercc6l	99	46.154	ENSPEMG00000007920	Ercc6l	98	47.332	Peromyscus_maniculatus_bairdii
ENSTRUG00000012053	ercc6l	59	60.709	ENSPMAG00000005064	ercc6l	100	58.560	Petromyzon_marinus
ENSTRUG00000012053	ercc6l	99	45.804	ENSPCIG00000026973	ERCC6L	90	51.852	Phascolarctos_cinereus
ENSTRUG00000012053	ercc6l	82	64.745	ENSPFOG00000010410	ercc6l	98	74.572	Poecilia_formosa
ENSTRUG00000012053	ercc6l	90	76.232	ENSPLAG00000005575	ercc6l	98	74.419	Poecilia_latipinna
ENSTRUG00000012053	ercc6l	90	76.522	ENSPMEG00000016911	ercc6l	99	74.969	Poecilia_mexicana
ENSTRUG00000012053	ercc6l	87	81.000	ENSPREG00000017617	ercc6l	94	79.191	Poecilia_reticulata
ENSTRUG00000012053	ercc6l	99	45.747	ENSPPYG00000020461	ERCC6L	98	47.826	Pongo_abelii
ENSTRUG00000012053	ercc6l	99	46.416	ENSPCOG00000024286	ERCC6L	98	44.428	Propithecus_coquereli
ENSTRUG00000012053	ercc6l	85	62.754	ENSPVAG00000013596	ERCC6L	86	60.106	Pteropus_vampyrus
ENSTRUG00000012053	ercc6l	91	80.030	ENSPNYG00000013185	ercc6l	98	79.118	Pundamilia_nyererei
ENSTRUG00000012053	ercc6l	88	56.020	ENSPNAG00000006556	ercc6l	94	55.192	Pygocentrus_nattereri
ENSTRUG00000012053	ercc6l	99	45.690	ENSRNOG00000003208	Ercc6l	98	44.287	Rattus_norvegicus
ENSTRUG00000012053	ercc6l	99	45.717	ENSRBIG00000036588	ERCC6L	99	47.602	Rhinopithecus_bieti
ENSTRUG00000012053	ercc6l	99	45.573	ENSRROG00000042561	ERCC6L	98	47.400	Rhinopithecus_roxellana
ENSTRUG00000012053	ercc6l	78	51.420	ENSSBOG00000029416	ERCC6L	98	46.909	Saimiri_boliviensis_boliviensis
ENSTRUG00000012053	ercc6l	77	53.032	ENSSHAG00000001331	-	99	48.148	Sarcophilus_harrisii
ENSTRUG00000012053	ercc6l	99	45.512	ENSSHAG00000012578	-	71	59.836	Sarcophilus_harrisii
ENSTRUG00000012053	ercc6l	89	66.749	ENSSFOG00015009709	ercc6l	75	66.341	Scleropages_formosus
ENSTRUG00000012053	ercc6l	54	40.962	ENSSFOG00015014557	-	52	41.256	Scleropages_formosus
ENSTRUG00000012053	ercc6l	89	81.558	ENSSDUG00000013307	ercc6l	99	80.080	Seriola_dumerili
ENSTRUG00000012053	ercc6l	99	59.886	ENSSLDG00000014910	ercc6l	98	80.348	Seriola_lalandi_dorsalis
ENSTRUG00000012053	ercc6l	88	51.567	ENSSPUG00000005866	ERCC6L	93	51.866	Sphenodon_punctatus
ENSTRUG00000012053	ercc6l	95	68.305	ENSSPAG00000018472	ercc6l	99	64.085	Stegastes_partitus
ENSTRUG00000012053	ercc6l	99	47.837	ENSSSCG00000021834	ERCC6L	98	49.209	Sus_scrofa
ENSTRUG00000012053	ercc6l	99	46.320	ENSTTRG00000010777	ERCC6L	98	48.227	Tursiops_truncatus
ENSTRUG00000012053	ercc6l	99	46.221	ENSUAMG00000015605	ERCC6L	66	62.191	Ursus_americanus
ENSTRUG00000012053	ercc6l	99	46.047	ENSUMAG00000004863	ERCC6L	66	62.191	Ursus_maritimus
ENSTRUG00000012053	ercc6l	99	46.425	ENSVPAG00000010950	ERCC6L	98	48.684	Vicugna_pacos
ENSTRUG00000012053	ercc6l	99	46.201	ENSVVUG00000025512	ERCC6L	97	47.586	Vulpes_vulpes
ENSTRUG00000012053	ercc6l	99	48.804	ENSXETG00000022574	ercc6l	99	48.981	Xenopus_tropicalis
ENSTRUG00000012053	ercc6l	55	79.089	ENSXCOG00000011494	ercc6l	90	77.449	Xiphophorus_couchianus
ENSTRUG00000012053	ercc6l	86	80.565	ENSXMAG00000000948	ercc6l	99	78.955	Xiphophorus_maculatus