EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000012101 (Gene tree)
Gene ID: 101076367
Gene Symbol: polr3f
Alias: zgc:56299|zgc:76983
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 4090 bases
Position: chr17:4240085-4244174
Accession: 101076367
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000030625	RNA_pol_Rpc34	PF05158.12	6.2e-98	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000030742	-	2297	XM_003972208	ENSTRUP00000030625	316 (aa)	XP_003972257	H2U114

Gene Model

Click here to download ENSTRUG00000012101's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03020	RNA polymerase	KEGG
tru04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000012101's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000012101	polr3f	100	85.127	ENSG00000132664	POLR3F	100	85.127	Homo_sapiens
ENSTRUG00000012101	polr3f	100	93.671	ENSAPOG00000008271	polr3f	100	93.671	Acanthochromis_polyacanthus
ENSTRUG00000012101	polr3f	100	84.810	ENSAMEG00000005222	POLR3F	100	84.810	Ailuropoda_melanoleuca
ENSTRUG00000012101	polr3f	100	86.709	ENSACIG00000006705	polr3f	100	86.392	Amphilophus_citrinellus
ENSTRUG00000012101	polr3f	100	93.987	ENSAOCG00000000687	polr3f	100	93.987	Amphiprion_ocellaris
ENSTRUG00000012101	polr3f	100	93.671	ENSAPEG00000015263	polr3f	100	93.671	Amphiprion_percula
ENSTRUG00000012101	polr3f	87	94.545	ENSATEG00000015539	polr3f	100	94.545	Anabas_testudineus
ENSTRUG00000012101	polr3f	87	87.636	ENSAPLG00000005533	POLR3F	100	87.636	Anas_platyrhynchos
ENSTRUG00000012101	polr3f	97	85.390	ENSACAG00000014293	POLR3F	99	85.390	Anolis_carolinensis
ENSTRUG00000012101	polr3f	100	85.443	ENSANAG00000026726	POLR3F	100	85.443	Aotus_nancymaae
ENSTRUG00000012101	polr3f	100	93.354	ENSACLG00000003615	polr3f	100	93.354	Astatotilapia_calliptera
ENSTRUG00000012101	polr3f	100	88.924	ENSAMXG00000036020	polr3f	100	88.924	Astyanax_mexicanus
ENSTRUG00000012101	polr3f	100	84.494	ENSBTAG00000008825	POLR3F	100	84.494	Bos_taurus
ENSTRUG00000012101	polr3f	95	32.333	WBGene00021112	W09C3.4	95	32.667	Caenorhabditis_elegans
ENSTRUG00000012101	polr3f	100	85.443	ENSCJAG00000005159	POLR3F	100	85.443	Callithrix_jacchus
ENSTRUG00000012101	polr3f	100	85.127	ENSCAFG00000005420	POLR3F	100	85.127	Canis_familiaris
ENSTRUG00000012101	polr3f	100	85.127	ENSCAFG00020027500	POLR3F	100	85.127	Canis_lupus_dingo
ENSTRUG00000012101	polr3f	100	84.494	ENSCHIG00000014743	POLR3F	100	84.494	Capra_hircus
ENSTRUG00000012101	polr3f	100	84.494	ENSTSYG00000004207	POLR3F	100	84.494	Carlito_syrichta
ENSTRUG00000012101	polr3f	93	46.284	ENSCAPG00000008423	POLR3F	100	70.130	Cavia_aperea
ENSTRUG00000012101	polr3f	100	84.177	ENSCPOG00000002400	POLR3F	100	84.177	Cavia_porcellus
ENSTRUG00000012101	polr3f	100	75.633	ENSCCAG00000021800	POLR3F	100	75.633	Cebus_capucinus
ENSTRUG00000012101	polr3f	100	84.810	ENSCATG00000019507	POLR3F	100	84.810	Cercocebus_atys
ENSTRUG00000012101	polr3f	100	84.810	ENSCLAG00000016296	POLR3F	100	84.810	Chinchilla_lanigera
ENSTRUG00000012101	polr3f	100	84.810	ENSCSAG00000011513	POLR3F	100	84.810	Chlorocebus_sabaeus
ENSTRUG00000012101	polr3f	73	84.270	ENSCHOG00000013268	POLR3F	73	84.270	Choloepus_hoffmanni
ENSTRUG00000012101	polr3f	87	87.273	ENSCPBG00000023473	POLR3F	100	87.273	Chrysemys_picta_bellii
ENSTRUG00000012101	polr3f	99	59.683	ENSCING00000001212	-	99	59.683	Ciona_intestinalis
ENSTRUG00000012101	polr3f	71	59.111	ENSCSAVG00000003340	-	96	64.497	Ciona_savignyi
ENSTRUG00000012101	polr3f	92	84.536	ENSCANG00000037390	POLR3F	100	84.536	Colobus_angolensis_palliatus
ENSTRUG00000012101	polr3f	100	84.177	ENSCGRG00001002032	Polr3f	100	84.177	Cricetulus_griseus_chok1gshd
ENSTRUG00000012101	polr3f	100	84.177	ENSCGRG00000010852	Polr3f	100	84.177	Cricetulus_griseus_crigri
ENSTRUG00000012101	polr3f	100	88.924	ENSCSEG00000001247	polr3f	100	88.924	Cynoglossus_semilaevis
ENSTRUG00000012101	polr3f	100	91.456	ENSCVAG00000007611	polr3f	100	91.456	Cyprinodon_variegatus
ENSTRUG00000012101	polr3f	100	88.608	ENSDARG00000012572	polr3f	100	88.608	Danio_rerio
ENSTRUG00000012101	polr3f	100	81.646	ENSDNOG00000010719	POLR3F	100	81.646	Dasypus_novemcinctus
ENSTRUG00000012101	polr3f	100	84.810	ENSDORG00000016352	Polr3f	100	84.810	Dipodomys_ordii
ENSTRUG00000012101	polr3f	95	51.000	FBgn0038951	CG5380	99	51.000	Drosophila_melanogaster
ENSTRUG00000012101	polr3f	88	50.179	ENSETEG00000015485	-	99	50.179	Echinops_telfairi
ENSTRUG00000012101	polr3f	100	75.000	ENSEBUG00000006783	polr3f	100	75.000	Eptatretus_burgeri
ENSTRUG00000012101	polr3f	100	85.127	ENSEASG00005002022	POLR3F	100	85.127	Equus_asinus_asinus
ENSTRUG00000012101	polr3f	100	85.127	ENSECAG00000009920	POLR3F	100	85.127	Equus_caballus
ENSTRUG00000012101	polr3f	80	80.000	ENSEEUG00000000184	POLR3F	80	80.000	Erinaceus_europaeus
ENSTRUG00000012101	polr3f	100	89.557	ENSELUG00000001558	polr3f	100	89.557	Esox_lucius
ENSTRUG00000012101	polr3f	100	84.810	ENSFCAG00000013828	POLR3F	100	84.810	Felis_catus
ENSTRUG00000012101	polr3f	87	88.727	ENSFALG00000007623	POLR3F	100	88.727	Ficedula_albicollis
ENSTRUG00000012101	polr3f	100	84.177	ENSFDAG00000002528	POLR3F	100	84.177	Fukomys_damarensis
ENSTRUG00000012101	polr3f	100	90.823	ENSFHEG00000006450	polr3f	100	90.823	Fundulus_heteroclitus
ENSTRUG00000012101	polr3f	100	86.709	ENSGALG00000008749	POLR3F	100	86.709	Gallus_gallus
ENSTRUG00000012101	polr3f	100	91.772	ENSGAFG00000003698	polr3f	100	91.772	Gambusia_affinis
ENSTRUG00000012101	polr3f	100	86.709	ENSGAGG00000006151	POLR3F	100	86.709	Gopherus_agassizii
ENSTRUG00000012101	polr3f	100	85.127	ENSGGOG00000011543	POLR3F	100	85.127	Gorilla_gorilla
ENSTRUG00000012101	polr3f	100	93.671	ENSHBUG00000013806	polr3f	100	93.671	Haplochromis_burtoni
ENSTRUG00000012101	polr3f	100	84.177	ENSHGLG00000011867	POLR3F	100	84.177	Heterocephalus_glaber_female
ENSTRUG00000012101	polr3f	100	84.177	ENSHGLG00100012577	POLR3F	100	84.177	Heterocephalus_glaber_male
ENSTRUG00000012101	polr3f	100	81.962	ENSHCOG00000011751	polr3f	100	81.962	Hippocampus_comes
ENSTRUG00000012101	polr3f	100	88.608	ENSIPUG00000013347	polr3f	100	88.608	Ictalurus_punctatus
ENSTRUG00000012101	polr3f	100	84.810	ENSSTOG00000013588	POLR3F	100	84.810	Ictidomys_tridecemlineatus
ENSTRUG00000012101	polr3f	100	84.177	ENSJJAG00000017513	Polr3f	100	84.177	Jaculus_jaculus
ENSTRUG00000012101	polr3f	87	86.545	ENSKMAG00000016495	polr3f	100	85.455	Kryptolebias_marmoratus
ENSTRUG00000012101	polr3f	73	94.397	ENSLBEG00000011998	polr3f	100	94.397	Labrus_bergylta
ENSTRUG00000012101	polr3f	100	85.127	ENSLACG00000009371	POLR3F	100	85.127	Latimeria_chalumnae
ENSTRUG00000012101	polr3f	100	88.608	ENSLOCG00000015701	polr3f	100	88.608	Lepisosteus_oculatus
ENSTRUG00000012101	polr3f	100	84.494	ENSLAFG00000004929	POLR3F	100	84.494	Loxodonta_africana
ENSTRUG00000012101	polr3f	100	84.810	ENSMFAG00000002227	POLR3F	100	84.810	Macaca_fascicularis
ENSTRUG00000012101	polr3f	87	86.545	ENSMMUG00000004143	POLR3F	100	86.545	Macaca_mulatta
ENSTRUG00000012101	polr3f	100	84.810	ENSMNEG00000033404	POLR3F	100	84.810	Macaca_nemestrina
ENSTRUG00000012101	polr3f	100	84.810	ENSMLEG00000021905	POLR3F	100	84.810	Mandrillus_leucophaeus
ENSTRUG00000012101	polr3f	100	93.038	ENSMAMG00000017975	polr3f	100	93.038	Mastacembelus_armatus
ENSTRUG00000012101	polr3f	100	93.038	ENSMZEG00005015134	polr3f	100	93.038	Maylandia_zebra
ENSTRUG00000012101	polr3f	100	87.342	ENSMGAG00000006691	POLR3F	100	87.342	Meleagris_gallopavo
ENSTRUG00000012101	polr3f	100	84.177	ENSMAUG00000020176	Polr3f	100	84.177	Mesocricetus_auratus
ENSTRUG00000012101	polr3f	100	84.810	ENSMICG00000044519	POLR3F	100	84.810	Microcebus_murinus
ENSTRUG00000012101	polr3f	100	84.494	ENSMOCG00000018352	Polr3f	100	84.494	Microtus_ochrogaster
ENSTRUG00000012101	polr3f	93	95.286	ENSMMOG00000018477	polr3f	100	95.286	Mola_mola
ENSTRUG00000012101	polr3f	100	85.443	ENSMODG00000005624	POLR3F	100	85.443	Monodelphis_domestica
ENSTRUG00000012101	polr3f	100	93.354	ENSMALG00000006685	polr3f	100	93.354	Monopterus_albus
ENSTRUG00000012101	polr3f	100	83.861	MGP_CAROLIEiJ_G0024385	Polr3f	100	83.861	Mus_caroli
ENSTRUG00000012101	polr3f	100	83.861	ENSMUSG00000027427	Polr3f	100	83.861	Mus_musculus
ENSTRUG00000012101	polr3f	100	83.861	MGP_PahariEiJ_G0025829	Polr3f	100	83.861	Mus_pahari
ENSTRUG00000012101	polr3f	100	83.861	MGP_SPRETEiJ_G0025304	Polr3f	100	83.861	Mus_spretus
ENSTRUG00000012101	polr3f	100	64.000	ENSMPUG00000001252	-	100	64.000	Mustela_putorius_furo
ENSTRUG00000012101	polr3f	100	84.810	ENSMLUG00000014844	POLR3F	100	84.810	Myotis_lucifugus
ENSTRUG00000012101	polr3f	100	83.861	ENSNGAG00000010898	Polr3f	100	83.861	Nannospalax_galili
ENSTRUG00000012101	polr3f	100	93.987	ENSNBRG00000020796	polr3f	100	93.987	Neolamprologus_brichardi
ENSTRUG00000012101	polr3f	100	85.127	ENSNLEG00000009778	POLR3F	100	85.127	Nomascus_leucogenys
ENSTRUG00000012101	polr3f	93	80.678	ENSMEUG00000010320	POLR3F	100	80.678	Notamacropus_eugenii
ENSTRUG00000012101	polr3f	100	84.810	ENSOPRG00000003385	POLR3F	100	84.810	Ochotona_princeps
ENSTRUG00000012101	polr3f	100	85.127	ENSODEG00000011521	POLR3F	100	85.127	Octodon_degus
ENSTRUG00000012101	polr3f	100	94.304	ENSONIG00000006858	polr3f	100	94.304	Oreochromis_niloticus
ENSTRUG00000012101	polr3f	100	85.759	ENSOANG00000001253	POLR3F	100	85.759	Ornithorhynchus_anatinus
ENSTRUG00000012101	polr3f	100	85.127	ENSOCUG00000015067	POLR3F	100	85.127	Oryctolagus_cuniculus
ENSTRUG00000012101	polr3f	100	90.506	ENSORLG00000022412	polr3f	100	90.506	Oryzias_latipes
ENSTRUG00000012101	polr3f	100	90.506	ENSORLG00020021944	polr3f	100	90.506	Oryzias_latipes_hni
ENSTRUG00000012101	polr3f	100	83.861	ENSOGAG00000002916	POLR3F	100	83.861	Otolemur_garnettii
ENSTRUG00000012101	polr3f	100	51.899	ENSOARG00000008647	-	100	51.899	Ovis_aries
ENSTRUG00000012101	polr3f	100	84.494	ENSOARG00000000315	-	100	84.494	Ovis_aries
ENSTRUG00000012101	polr3f	100	85.127	ENSPPAG00000036681	POLR3F	100	85.127	Pan_paniscus
ENSTRUG00000012101	polr3f	100	84.810	ENSPPRG00000024604	POLR3F	100	84.810	Panthera_pardus
ENSTRUG00000012101	polr3f	100	84.810	ENSPTIG00000020292	POLR3F	100	84.810	Panthera_tigris_altaica
ENSTRUG00000012101	polr3f	100	85.127	ENSPTRG00000013287	POLR3F	100	85.127	Pan_troglodytes
ENSTRUG00000012101	polr3f	100	84.810	ENSPANG00000025015	POLR3F	100	84.810	Papio_anubis
ENSTRUG00000012101	polr3f	100	88.291	ENSPKIG00000004427	polr3f	100	88.291	Paramormyrops_kingsleyae
ENSTRUG00000012101	polr3f	87	88.000	ENSPSIG00000016613	POLR3F	100	88.000	Pelodiscus_sinensis
ENSTRUG00000012101	polr3f	100	56.740	ENSPMGG00000018350	polr3f	100	60.443	Periophthalmus_magnuspinnatus
ENSTRUG00000012101	polr3f	100	84.810	ENSPEMG00000006966	Polr3f	100	84.810	Peromyscus_maniculatus_bairdii
ENSTRUG00000012101	polr3f	100	76.582	ENSPMAG00000005530	polr3f	100	76.582	Petromyzon_marinus
ENSTRUG00000012101	polr3f	100	85.127	ENSPCIG00000000908	POLR3F	85	85.127	Phascolarctos_cinereus
ENSTRUG00000012101	polr3f	100	91.772	ENSPFOG00000018334	polr3f	100	91.772	Poecilia_formosa
ENSTRUG00000012101	polr3f	100	91.772	ENSPLAG00000021803	polr3f	100	91.772	Poecilia_latipinna
ENSTRUG00000012101	polr3f	100	91.772	ENSPMEG00000013150	polr3f	100	91.772	Poecilia_mexicana
ENSTRUG00000012101	polr3f	100	91.772	ENSPREG00000005278	polr3f	100	91.772	Poecilia_reticulata
ENSTRUG00000012101	polr3f	100	85.127	ENSPPYG00000010737	POLR3F	100	85.127	Pongo_abelii
ENSTRUG00000012101	polr3f	66	87.162	ENSPCAG00000004893	POLR3F	70	87.162	Procavia_capensis
ENSTRUG00000012101	polr3f	100	84.810	ENSPCOG00000004543	POLR3F	100	84.810	Propithecus_coquereli
ENSTRUG00000012101	polr3f	100	84.494	ENSPVAG00000000403	POLR3F	100	84.494	Pteropus_vampyrus
ENSTRUG00000012101	polr3f	100	93.671	ENSPNYG00000016276	polr3f	100	93.671	Pundamilia_nyererei
ENSTRUG00000012101	polr3f	100	89.873	ENSPNAG00000005164	polr3f	100	89.873	Pygocentrus_nattereri
ENSTRUG00000012101	polr3f	100	84.177	ENSRNOG00000007548	Polr3f	85	84.177	Rattus_norvegicus
ENSTRUG00000012101	polr3f	100	84.810	ENSRBIG00000021268	POLR3F	100	84.810	Rhinopithecus_bieti
ENSTRUG00000012101	polr3f	100	84.810	ENSRROG00000039911	POLR3F	100	84.810	Rhinopithecus_roxellana
ENSTRUG00000012101	polr3f	64	30.769	YNR003C	RPC34	56	31.868	Saccharomyces_cerevisiae
ENSTRUG00000012101	polr3f	100	85.443	ENSSBOG00000018207	POLR3F	100	85.443	Saimiri_boliviensis_boliviensis
ENSTRUG00000012101	polr3f	100	68.454	ENSSHAG00000018160	POLR3F	100	67.913	Sarcophilus_harrisii
ENSTRUG00000012101	polr3f	100	88.608	ENSSFOG00015022433	polr3f	100	88.608	Scleropages_formosus
ENSTRUG00000012101	polr3f	100	91.772	ENSSMAG00000021029	polr3f	100	91.772	Scophthalmus_maximus
ENSTRUG00000012101	polr3f	100	83.228	ENSSDUG00000022435	polr3f	100	83.228	Seriola_dumerili
ENSTRUG00000012101	polr3f	100	93.671	ENSSLDG00000012761	polr3f	100	93.671	Seriola_lalandi_dorsalis
ENSTRUG00000012101	polr3f	100	76.582	ENSSARG00000006039	POLR3F	100	76.582	Sorex_araneus
ENSTRUG00000012101	polr3f	100	85.443	ENSSPUG00000001873	POLR3F	100	85.443	Sphenodon_punctatus
ENSTRUG00000012101	polr3f	100	84.810	ENSSPAG00000002092	polr3f	100	84.810	Stegastes_partitus
ENSTRUG00000012101	polr3f	100	84.494	ENSSSCG00000007095	POLR3F	100	90.086	Sus_scrofa
ENSTRUG00000012101	polr3f	100	87.025	ENSTGUG00000005839	POLR3F	100	87.025	Taeniopygia_guttata
ENSTRUG00000012101	polr3f	100	95.570	ENSTNIG00000006456	polr3f	100	95.570	Tetraodon_nigroviridis
ENSTRUG00000012101	polr3f	100	68.671	ENSTBEG00000007921	POLR3F	100	68.671	Tupaia_belangeri
ENSTRUG00000012101	polr3f	100	84.494	ENSTTRG00000002580	POLR3F	100	84.494	Tursiops_truncatus
ENSTRUG00000012101	polr3f	53	86.747	ENSUAMG00000024166	POLR3F	100	86.747	Ursus_americanus
ENSTRUG00000012101	polr3f	100	84.494	ENSUMAG00000024944	POLR3F	100	84.494	Ursus_maritimus
ENSTRUG00000012101	polr3f	100	84.494	ENSVPAG00000009063	POLR3F	100	84.494	Vicugna_pacos
ENSTRUG00000012101	polr3f	100	85.127	ENSVVUG00000012925	POLR3F	100	85.127	Vulpes_vulpes
ENSTRUG00000012101	polr3f	100	84.494	ENSXETG00000024898	polr3f	100	84.494	Xenopus_tropicalis
ENSTRUG00000012101	polr3f	87	92.727	ENSXCOG00000010301	polr3f	100	92.727	Xiphophorus_couchianus
ENSTRUG00000012101	polr3f	100	91.456	ENSXMAG00000004604	polr3f	100	91.456	Xiphophorus_maculatus