EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000012218 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 6136 bases
Position: chr8:6516464-6522599
Accession: 101061115
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000030935	Exo_endo_phos	PF03372.23	4.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000031053	-	858	XM_003966647	ENSTRUP00000030935	285 (aa)	XP_003966696	H2U1X4

Gene Model

Click here to download ENSTRUG00000012218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000012218's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000012218	-	96	58.065	ENSTRUG00000014347	tdp2b	76	58.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000012218	-	99	48.185	ENSG00000111802	TDP2	99	48.185	Homo_sapiens
ENSTRUG00000012218	-	98	66.904	ENSAPOG00000018379	-	98	66.904	Acanthochromis_polyacanthus
ENSTRUG00000012218	-	96	49.281	ENSAMEG00000010230	TDP2	96	49.281	Ailuropoda_melanoleuca
ENSTRUG00000012218	-	58	69.277	ENSAOCG00000010081	-	73	69.277	Amphiprion_ocellaris
ENSTRUG00000012218	-	98	63.475	ENSAPEG00000004208	-	98	63.475	Amphiprion_percula
ENSTRUG00000012218	-	87	64.940	ENSATEG00000010663	-	81	64.940	Anabas_testudineus
ENSTRUG00000012218	-	88	53.755	ENSACAG00000002332	TDP2	68	53.755	Anolis_carolinensis
ENSTRUG00000012218	-	89	52.326	ENSANAG00000020033	TDP2	70	52.326	Aotus_nancymaae
ENSTRUG00000012218	-	87	62.249	ENSACLG00000016174	tdp2b	84	62.249	Astatotilapia_calliptera
ENSTRUG00000012218	-	87	60.159	ENSACLG00000016132	tdp2b	84	60.159	Astatotilapia_calliptera
ENSTRUG00000012218	-	87	60.241	ENSACLG00000016148	tdp2b	89	60.241	Astatotilapia_calliptera
ENSTRUG00000012218	-	90	57.143	ENSAMXG00000011775	tdp2b	68	57.143	Astyanax_mexicanus
ENSTRUG00000012218	-	96	50.357	ENSAMXG00000036549	tdp2a	91	50.357	Astyanax_mexicanus
ENSTRUG00000012218	-	89	51.550	ENSBTAG00000000365	TDP2	70	51.550	Bos_taurus
ENSTRUG00000012218	-	86	33.071	WBGene00013405	tdpt-1	67	33.071	Caenorhabditis_elegans
ENSTRUG00000012218	-	89	51.550	ENSCJAG00000021963	-	70	51.550	Callithrix_jacchus
ENSTRUG00000012218	-	89	52.326	ENSCJAG00000006074	TDP2	84	52.326	Callithrix_jacchus
ENSTRUG00000012218	-	96	50.000	ENSCAFG00000010428	TDP2	92	50.000	Canis_familiaris
ENSTRUG00000012218	-	96	50.000	ENSCAFG00020009994	TDP2	92	50.000	Canis_lupus_dingo
ENSTRUG00000012218	-	92	49.624	ENSCHIG00000015294	-	89	49.624	Capra_hircus
ENSTRUG00000012218	-	87	52.400	ENSTSYG00000037199	TDP2	84	50.000	Carlito_syrichta
ENSTRUG00000012218	-	87	54.400	ENSCPOG00000006390	TDP2	69	54.400	Cavia_porcellus
ENSTRUG00000012218	-	89	53.101	ENSCCAG00000022734	TDP2	84	53.101	Cebus_capucinus
ENSTRUG00000012218	-	90	52.692	ENSCATG00000022076	TDP2	84	52.692	Cercocebus_atys
ENSTRUG00000012218	-	87	54.000	ENSCLAG00000002072	TDP2	69	54.000	Chinchilla_lanigera
ENSTRUG00000012218	-	90	52.692	ENSCSAG00000007769	TDP2	71	52.692	Chlorocebus_sabaeus
ENSTRUG00000012218	-	92	52.632	ENSCPBG00000006551	TDP2	66	52.632	Chrysemys_picta_bellii
ENSTRUG00000012218	-	90	52.692	ENSCANG00000040122	TDP2	84	52.692	Colobus_angolensis_palliatus
ENSTRUG00000012218	-	87	52.381	ENSCGRG00001000384	Tdp2	67	52.381	Cricetulus_griseus_chok1gshd
ENSTRUG00000012218	-	87	52.381	ENSCGRG00000010250	Tdp2	71	52.381	Cricetulus_griseus_crigri
ENSTRUG00000012218	-	94	59.410	ENSCVAG00000003114	tdp2b	73	59.410	Cyprinodon_variegatus
ENSTRUG00000012218	-	92	55.351	ENSDARG00000035954	tdp2b	70	55.351	Danio_rerio
ENSTRUG00000012218	-	89	51.341	ENSDARG00000069941	tdp2a	57	51.341	Danio_rerio
ENSTRUG00000012218	-	87	54.400	ENSDNOG00000044082	TDP2	67	54.400	Dasypus_novemcinctus
ENSTRUG00000012218	-	89	51.953	ENSETEG00000019096	TDP2	91	51.953	Echinops_telfairi
ENSTRUG00000012218	-	86	46.371	ENSEBUG00000006535	tdp2a	58	46.371	Eptatretus_burgeri
ENSTRUG00000012218	-	96	48.921	ENSEASG00005007656	TDP2	74	48.921	Equus_asinus_asinus
ENSTRUG00000012218	-	96	48.921	ENSECAG00000014264	TDP2	74	48.921	Equus_caballus
ENSTRUG00000012218	-	87	52.000	ENSEEUG00000010776	TDP2	69	52.000	Erinaceus_europaeus
ENSTRUG00000012218	-	91	49.810	ENSELUG00000009321	tdp2a	80	50.775	Esox_lucius
ENSTRUG00000012218	-	87	60.800	ENSELUG00000016449	tdp2b	66	60.800	Esox_lucius
ENSTRUG00000012218	-	96	50.360	ENSFCAG00000025612	TDP2	74	50.360	Felis_catus
ENSTRUG00000012218	-	92	52.256	ENSFALG00000004710	TDP2	73	52.256	Ficedula_albicollis
ENSTRUG00000012218	-	87	53.200	ENSFDAG00000006512	TDP2	85	53.200	Fukomys_damarensis
ENSTRUG00000012218	-	87	65.060	ENSFHEG00000013560	-	86	65.060	Fundulus_heteroclitus
ENSTRUG00000012218	-	89	54.651	ENSGALG00000013637	TDP2	69	54.651	Gallus_gallus
ENSTRUG00000012218	-	92	53.008	ENSGAGG00000002853	TDP2	66	53.008	Gopherus_agassizii
ENSTRUG00000012218	-	99	48.185	ENSGGOG00000014237	TDP2	99	48.185	Gorilla_gorilla
ENSTRUG00000012218	-	74	56.604	ENSHBUG00000005421	-	87	56.604	Haplochromis_burtoni
ENSTRUG00000012218	-	96	56.727	ENSHBUG00000002714	tdp2b	73	58.672	Haplochromis_burtoni
ENSTRUG00000012218	-	87	53.600	ENSHGLG00000008655	TDP2	69	53.600	Heterocephalus_glaber_female
ENSTRUG00000012218	-	87	53.600	ENSHGLG00100019087	TDP2	69	53.600	Heterocephalus_glaber_male
ENSTRUG00000012218	-	91	57.471	ENSIPUG00000013691	tdp2b	68	57.471	Ictalurus_punctatus
ENSTRUG00000012218	-	85	50.813	ENSJJAG00000021685	Tdp2	70	50.813	Jaculus_jaculus
ENSTRUG00000012218	-	92	64.684	ENSKMAG00000015485	-	86	64.684	Kryptolebias_marmoratus
ENSTRUG00000012218	-	87	52.191	ENSLACG00000008852	TDP2	68	52.191	Latimeria_chalumnae
ENSTRUG00000012218	-	94	51.292	ENSLOCG00000005817	tdp2b	96	51.292	Lepisosteus_oculatus
ENSTRUG00000012218	-	87	54.800	ENSLAFG00000002567	TDP2	70	54.800	Loxodonta_africana
ENSTRUG00000012218	-	90	52.692	ENSMFAG00000045296	TDP2	84	52.692	Macaca_fascicularis
ENSTRUG00000012218	-	90	52.692	ENSMMUG00000009803	TDP2	71	52.692	Macaca_mulatta
ENSTRUG00000012218	-	90	52.692	ENSMNEG00000038003	TDP2	84	52.692	Macaca_nemestrina
ENSTRUG00000012218	-	98	48.173	ENSMLEG00000028883	TDP2	98	48.173	Mandrillus_leucophaeus
ENSTRUG00000012218	-	91	60.606	ENSMAMG00000013654	tdp2b	74	60.606	Mastacembelus_armatus
ENSTRUG00000012218	-	94	58.672	ENSMZEG00005003950	tdp2b	73	58.672	Maylandia_zebra
ENSTRUG00000012218	-	96	57.455	ENSMZEG00005004126	tdp2b	93	57.455	Maylandia_zebra
ENSTRUG00000012218	-	74	57.547	ENSMZEG00005003980	-	69	57.547	Maylandia_zebra
ENSTRUG00000012218	-	87	57.028	ENSMZEG00005004103	tdp2b	84	57.028	Maylandia_zebra
ENSTRUG00000012218	-	94	57.621	ENSMZEG00005004153	tdp2b	95	57.621	Maylandia_zebra
ENSTRUG00000012218	-	84	60.417	ENSMZEG00005004055	tdp2b	80	60.417	Maylandia_zebra
ENSTRUG00000012218	-	87	60.643	ENSMZEG00005004077	tdp2b	85	60.643	Maylandia_zebra
ENSTRUG00000012218	-	88	55.686	ENSMGAG00000008014	TDP2	68	55.686	Meleagris_gallopavo
ENSTRUG00000012218	-	87	51.587	ENSMAUG00000014451	Tdp2	67	51.587	Mesocricetus_auratus
ENSTRUG00000012218	-	93	52.045	ENSMICG00000000039	TDP2	88	52.045	Microcebus_murinus
ENSTRUG00000012218	-	87	51.587	ENSMOCG00000002823	Tdp2	67	51.793	Microtus_ochrogaster
ENSTRUG00000012218	-	79	53.304	ENSMODG00000011653	TDP2	67	53.304	Monodelphis_domestica
ENSTRUG00000012218	-	88	67.460	ENSMALG00000005368	-	86	67.460	Monopterus_albus
ENSTRUG00000012218	-	94	50.177	MGP_CAROLIEiJ_G0018354	Tdp2	75	50.177	Mus_caroli
ENSTRUG00000012218	-	95	49.648	ENSMUSG00000035958	Tdp2	75	49.823	Mus_musculus
ENSTRUG00000012218	-	98	47.440	MGP_PahariEiJ_G0019417	Tdp2	78	47.440	Mus_pahari
ENSTRUG00000012218	-	95	48.944	MGP_SPRETEiJ_G0019220	Tdp2	75	48.944	Mus_spretus
ENSTRUG00000012218	-	96	50.000	ENSMPUG00000004516	TDP2	74	50.000	Mustela_putorius_furo
ENSTRUG00000012218	-	92	49.624	ENSMLUG00000013506	TDP2	73	49.624	Myotis_lucifugus
ENSTRUG00000012218	-	94	48.239	ENSNGAG00000001375	Tdp2	76	48.239	Nannospalax_galili
ENSTRUG00000012218	-	95	49.488	ENSNLEG00000002447	TDP2	92	49.488	Nomascus_leucogenys
ENSTRUG00000012218	-	87	52.400	ENSOPRG00000016299	TDP2	71	52.400	Ochotona_princeps
ENSTRUG00000012218	-	91	52.490	ENSODEG00000014018	TDP2	88	52.490	Octodon_degus
ENSTRUG00000012218	-	87	52.400	ENSOCUG00000013773	TDP2	69	52.400	Oryctolagus_cuniculus
ENSTRUG00000012218	-	92	63.498	ENSORLG00000001661	-	96	63.498	Oryzias_latipes
ENSTRUG00000012218	-	92	63.498	ENSORLG00020004634	-	96	63.498	Oryzias_latipes_hni
ENSTRUG00000012218	-	92	55.556	ENSORLG00015008190	-	96	55.556	Oryzias_latipes_hsok
ENSTRUG00000012218	-	87	62.249	ENSOMEG00000015899	-	92	61.538	Oryzias_melastigma
ENSTRUG00000012218	-	87	52.400	ENSOGAG00000025303	TDP2	67	52.400	Otolemur_garnettii
ENSTRUG00000012218	-	97	48.993	ENSPPAG00000029023	TDP2	98	48.993	Pan_paniscus
ENSTRUG00000012218	-	96	49.640	ENSPPRG00000015398	TDP2	74	49.640	Panthera_pardus
ENSTRUG00000012218	-	96	49.640	ENSPTIG00000018574	TDP2	92	49.640	Panthera_tigris_altaica
ENSTRUG00000012218	-	99	48.185	ENSPTRG00000017778	TDP2	99	48.185	Pan_troglodytes
ENSTRUG00000012218	-	90	52.692	ENSPANG00000017590	TDP2	84	52.692	Papio_anubis
ENSTRUG00000012218	-	89	56.589	ENSPKIG00000006483	tdp2b	69	56.589	Paramormyrops_kingsleyae
ENSTRUG00000012218	-	91	53.612	ENSPSIG00000004948	TDP2	88	53.612	Pelodiscus_sinensis
ENSTRUG00000012218	-	94	48.057	ENSPEMG00000001788	Tdp2	75	48.057	Peromyscus_maniculatus_bairdii
ENSTRUG00000012218	-	86	41.762	ENSPMAG00000001570	tdp2b	95	41.762	Petromyzon_marinus
ENSTRUG00000012218	-	90	50.579	ENSPCIG00000007316	TDP2	67	50.579	Phascolarctos_cinereus
ENSTRUG00000012218	-	87	65.200	ENSPFOG00000017990	-	90	65.200	Poecilia_formosa
ENSTRUG00000012218	-	87	64.800	ENSPLAG00000019439	-	79	64.800	Poecilia_latipinna
ENSTRUG00000012218	-	87	65.600	ENSPMEG00000010824	-	84	65.600	Poecilia_mexicana
ENSTRUG00000012218	-	89	52.326	ENSPPYG00000016282	TDP2	65	52.326	Pongo_abelii
ENSTRUG00000012218	-	93	50.558	ENSPCOG00000021415	TDP2	92	50.558	Propithecus_coquereli
ENSTRUG00000012218	-	56	59.119	ENSPNYG00000001944	-	66	59.119	Pundamilia_nyererei
ENSTRUG00000012218	-	94	54.007	ENSPNYG00000011504	tdp2b	93	54.007	Pundamilia_nyererei
ENSTRUG00000012218	-	94	57.196	ENSPNYG00000011532	tdp2b	73	57.196	Pundamilia_nyererei
ENSTRUG00000012218	-	97	50.714	ENSPNAG00000022162	tdp2a	69	50.714	Pygocentrus_nattereri
ENSTRUG00000012218	-	87	51.793	ENSRNOG00000018246	Tdp2	67	51.793	Rattus_norvegicus
ENSTRUG00000012218	-	90	52.692	ENSRBIG00000037119	TDP2	84	52.692	Rhinopithecus_bieti
ENSTRUG00000012218	-	90	52.692	ENSRROG00000005025	TDP2	84	52.692	Rhinopithecus_roxellana
ENSTRUG00000012218	-	89	51.938	ENSSBOG00000028734	TDP2	84	51.938	Saimiri_boliviensis_boliviensis
ENSTRUG00000012218	-	89	53.906	ENSSHAG00000002506	TDP2	68	53.906	Sarcophilus_harrisii
ENSTRUG00000012218	-	89	51.984	ENSSFOG00015011322	-	72	51.163	Scleropages_formosus
ENSTRUG00000012218	-	87	50.400	ENSSARG00000013547	TDP2	89	50.400	Sorex_araneus
ENSTRUG00000012218	-	89	49.219	ENSSPUG00000008288	TDP2	69	49.219	Sphenodon_punctatus
ENSTRUG00000012218	-	94	50.000	ENSSSCG00000001092	TDP2	72	50.000	Sus_scrofa
ENSTRUG00000012218	-	90	51.351	ENSTGUG00000009035	TDP2	98	51.351	Taeniopygia_guttata
ENSTRUG00000012218	-	91	81.679	ENSTNIG00000010260	TDP2	99	81.679	Tetraodon_nigroviridis
ENSTRUG00000012218	-	94	59.480	ENSTNIG00000017792	tdp2b	73	59.480	Tetraodon_nigroviridis
ENSTRUG00000012218	-	86	54.839	ENSTTRG00000016376	TDP2	71	52.239	Tursiops_truncatus
ENSTRUG00000012218	-	96	49.640	ENSUAMG00000025939	TDP2	77	49.640	Ursus_americanus
ENSTRUG00000012218	-	96	49.640	ENSUMAG00000020111	TDP2	89	49.640	Ursus_maritimus
ENSTRUG00000012218	-	93	50.000	ENSXETG00000014826	tdp2	69	50.000	Xenopus_tropicalis
ENSTRUG00000012218	-	87	65.737	ENSXCOG00000010778	-	70	65.737	Xiphophorus_couchianus
ENSTRUG00000012218	-	87	65.737	ENSXMAG00000022252	-	73	65.737	Xiphophorus_maculatus