EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000012245 (Gene tree)
Gene ID: 101073666
Gene Symbol: c1d
Alias: zgc:103509
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 2675 bases
Position: chr4:5480966-5483640
Accession: 101073666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000031001	Sas10_Utp3	PF04000.15	1.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000031119	-	501	XM_003963860	ENSTRUP00000031001	166 (aa)	XP_003963909	H2U240

Gene Model

Click here to download ENSTRUG00000012245's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000012245's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000012245	c1d	84	60.714	ENSG00000197223	C1D	96	60.714	Homo_sapiens
ENSTRUG00000012245	c1d	90	72.667	ENSAPOG00000005466	c1d	98	72.603	Acanthochromis_polyacanthus
ENSTRUG00000012245	c1d	83	60.870	ENSAMEG00000004859	C1D	91	60.870	Ailuropoda_melanoleuca
ENSTRUG00000012245	c1d	81	79.259	ENSACIG00000012684	c1d	88	79.259	Amphilophus_citrinellus
ENSTRUG00000012245	c1d	89	74.324	ENSAOCG00000020354	c1d	96	74.324	Amphiprion_ocellaris
ENSTRUG00000012245	c1d	89	74.324	ENSAPEG00000001403	c1d	96	74.324	Amphiprion_percula
ENSTRUG00000012245	c1d	93	76.129	ENSATEG00000012922	c1d	100	76.129	Anabas_testudineus
ENSTRUG00000012245	c1d	82	62.500	ENSAPLG00000009320	C1D	92	62.500	Anas_platyrhynchos
ENSTRUG00000012245	c1d	71	68.644	ENSACAG00000001337	C1D	97	68.644	Anolis_carolinensis
ENSTRUG00000012245	c1d	84	61.429	ENSANAG00000035972	-	96	61.429	Aotus_nancymaae
ENSTRUG00000012245	c1d	84	58.571	ENSANAG00000005773	-	96	58.571	Aotus_nancymaae
ENSTRUG00000012245	c1d	89	74.830	ENSACLG00000026206	c1d	95	76.190	Astatotilapia_calliptera
ENSTRUG00000012245	c1d	84	63.571	ENSAMXG00000043212	c1d	89	63.571	Astyanax_mexicanus
ENSTRUG00000012245	c1d	83	61.594	ENSBTAG00000049002	C1D	94	61.594	Bos_taurus
ENSTRUG00000012245	c1d	63	61.905	ENSCJAG00000044668	-	82	61.905	Callithrix_jacchus
ENSTRUG00000012245	c1d	84	60.714	ENSCJAG00000006589	C1D	89	60.714	Callithrix_jacchus
ENSTRUG00000012245	c1d	83	61.594	ENSCAFG00000030099	C1D	94	61.594	Canis_familiaris
ENSTRUG00000012245	c1d	83	61.594	ENSCAFG00020026997	C1D	94	61.594	Canis_lupus_dingo
ENSTRUG00000012245	c1d	83	60.870	ENSCHIG00000025729	C1D	94	60.870	Capra_hircus
ENSTRUG00000012245	c1d	83	54.348	ENSTSYG00000026573	-	80	54.348	Carlito_syrichta
ENSTRUG00000012245	c1d	83	62.319	ENSTSYG00000035739	-	94	62.319	Carlito_syrichta
ENSTRUG00000012245	c1d	64	59.434	ENSCAPG00000011523	-	88	59.434	Cavia_aperea
ENSTRUG00000012245	c1d	64	60.377	ENSCPOG00000020112	-	88	60.377	Cavia_porcellus
ENSTRUG00000012245	c1d	84	62.143	ENSCPOG00000037986	-	96	62.143	Cavia_porcellus
ENSTRUG00000012245	c1d	84	60.714	ENSCCAG00000030405	-	96	60.714	Cebus_capucinus
ENSTRUG00000012245	c1d	84	60.000	ENSCATG00000045336	C1D	96	60.000	Cercocebus_atys
ENSTRUG00000012245	c1d	88	58.219	ENSCATG00000043348	-	100	58.219	Cercocebus_atys
ENSTRUG00000012245	c1d	81	61.194	ENSCLAG00000011883	C1D	94	61.194	Chinchilla_lanigera
ENSTRUG00000012245	c1d	74	63.415	ENSCSAG00000014811	C1D	87	63.415	Chlorocebus_sabaeus
ENSTRUG00000012245	c1d	83	61.594	ENSCHOG00000006719	C1D	74	61.594	Choloepus_hoffmanni
ENSTRUG00000012245	c1d	83	59.420	ENSCPBG00000014451	C1D	93	59.420	Chrysemys_picta_bellii
ENSTRUG00000012245	c1d	70	44.444	ENSCING00000020906	-	64	43.443	Ciona_intestinalis
ENSTRUG00000012245	c1d	70	42.735	ENSCSAVG00000000150	-	67	42.735	Ciona_savignyi
ENSTRUG00000012245	c1d	84	60.000	ENSCANG00000035564	C1D	96	60.000	Colobus_angolensis_palliatus
ENSTRUG00000012245	c1d	64	61.682	ENSCANG00000036599	-	87	61.682	Colobus_angolensis_palliatus
ENSTRUG00000012245	c1d	74	65.041	ENSCGRG00001023376	C1d	87	65.041	Cricetulus_griseus_chok1gshd
ENSTRUG00000012245	c1d	74	65.041	ENSCGRG00000010245	C1d	87	65.041	Cricetulus_griseus_crigri
ENSTRUG00000012245	c1d	89	72.789	ENSCSEG00000000587	c1d	97	76.812	Cynoglossus_semilaevis
ENSTRUG00000012245	c1d	86	76.224	ENSCVAG00000004603	c1d	94	76.224	Cyprinodon_variegatus
ENSTRUG00000012245	c1d	70	65.517	ENSDARG00000021112	c1d	91	59.559	Danio_rerio
ENSTRUG00000012245	c1d	83	54.348	ENSDNOG00000046068	-	94	54.348	Dasypus_novemcinctus
ENSTRUG00000012245	c1d	83	59.420	ENSDORG00000003300	C1d	94	59.420	Dipodomys_ordii
ENSTRUG00000012245	c1d	60	67.000	ENSETEG00000014857	C1D	100	67.000	Echinops_telfairi
ENSTRUG00000012245	c1d	73	50.820	ENSEBUG00000006874	c1d	77	50.820	Eptatretus_burgeri
ENSTRUG00000012245	c1d	83	61.594	ENSEASG00005007307	C1D	86	61.594	Equus_asinus_asinus
ENSTRUG00000012245	c1d	83	61.314	ENSECAG00000002187	C1D	94	61.314	Equus_caballus
ENSTRUG00000012245	c1d	72	75.000	ENSELUG00000014823	c1d	82	75.000	Esox_lucius
ENSTRUG00000012245	c1d	83	61.594	ENSFCAG00000028933	C1D	94	61.594	Felis_catus
ENSTRUG00000012245	c1d	82	61.765	ENSFALG00000013640	C1D	81	61.765	Ficedula_albicollis
ENSTRUG00000012245	c1d	83	60.145	ENSFDAG00000010462	-	94	60.145	Fukomys_damarensis
ENSTRUG00000012245	c1d	83	50.360	ENSFDAG00000014175	-	93	50.360	Fukomys_damarensis
ENSTRUG00000012245	c1d	89	74.324	ENSFHEG00000010545	c1d	99	74.126	Fundulus_heteroclitus
ENSTRUG00000012245	c1d	72	71.667	ENSGMOG00000013911	-	95	71.667	Gadus_morhua
ENSTRUG00000012245	c1d	80	61.364	ENSGALG00000008765	C1D	92	61.364	Gallus_gallus
ENSTRUG00000012245	c1d	90	69.128	ENSGAFG00000012578	c1d	95	69.128	Gambusia_affinis
ENSTRUG00000012245	c1d	77	71.875	ENSGACG00000011981	c1d	100	71.875	Gasterosteus_aculeatus
ENSTRUG00000012245	c1d	71	65.254	ENSGAGG00000013383	C1D	93	58.696	Gopherus_agassizii
ENSTRUG00000012245	c1d	84	60.000	ENSGGOG00000022296	-	96	60.000	Gorilla_gorilla
ENSTRUG00000012245	c1d	83	61.594	ENSGGOG00000025982	-	74	61.594	Gorilla_gorilla
ENSTRUG00000012245	c1d	80	60.606	ENSGGOG00000025808	-	75	60.606	Gorilla_gorilla
ENSTRUG00000012245	c1d	88	75.839	ENSHBUG00000018531	c1d	89	74.675	Haplochromis_burtoni
ENSTRUG00000012245	c1d	73	63.934	ENSHGLG00000012332	-	87	63.934	Heterocephalus_glaber_female
ENSTRUG00000012245	c1d	70	59.483	ENSHGLG00000021219	-	82	59.483	Heterocephalus_glaber_female
ENSTRUG00000012245	c1d	70	60.345	ENSHGLG00100019951	-	82	60.345	Heterocephalus_glaber_male
ENSTRUG00000012245	c1d	84	59.286	ENSHGLG00100000221	-	96	59.286	Heterocephalus_glaber_male
ENSTRUG00000012245	c1d	86	68.531	ENSHCOG00000014568	C1D	97	68.531	Hippocampus_comes
ENSTRUG00000012245	c1d	86	68.531	ENSHCOG00000014589	c1d	97	68.531	Hippocampus_comes
ENSTRUG00000012245	c1d	70	68.966	ENSIPUG00000018661	c1d	80	68.966	Ictalurus_punctatus
ENSTRUG00000012245	c1d	83	60.870	ENSSTOG00000012346	C1D	94	60.870	Ictidomys_tridecemlineatus
ENSTRUG00000012245	c1d	78	59.231	ENSJJAG00000009540	-	94	59.231	Jaculus_jaculus
ENSTRUG00000012245	c1d	80	51.515	ENSJJAG00000016086	-	95	51.515	Jaculus_jaculus
ENSTRUG00000012245	c1d	72	60.976	ENSJJAG00000023186	-	94	60.976	Jaculus_jaculus
ENSTRUG00000012245	c1d	80	56.818	ENSJJAG00000005044	-	96	56.818	Jaculus_jaculus
ENSTRUG00000012245	c1d	90	72.667	ENSKMAG00000015077	c1d	97	72.667	Kryptolebias_marmoratus
ENSTRUG00000012245	c1d	87	80.000	ENSLBEG00000008351	c1d	94	80.000	Labrus_bergylta
ENSTRUG00000012245	c1d	83	62.044	ENSLACG00000007516	C1D	79	69.492	Latimeria_chalumnae
ENSTRUG00000012245	c1d	70	70.085	ENSLOCG00000016024	c1d	80	70.085	Lepisosteus_oculatus
ENSTRUG00000012245	c1d	83	60.145	ENSLAFG00000002083	C1D	94	60.145	Loxodonta_africana
ENSTRUG00000012245	c1d	88	58.219	ENSMFAG00000034034	-	100	58.219	Macaca_fascicularis
ENSTRUG00000012245	c1d	84	60.000	ENSMFAG00000034261	C1D	96	60.000	Macaca_fascicularis
ENSTRUG00000012245	c1d	84	58.571	ENSMFAG00000028681	-	96	58.571	Macaca_fascicularis
ENSTRUG00000012245	c1d	83	60.584	ENSMMUG00000041557	C1D	95	60.584	Macaca_mulatta
ENSTRUG00000012245	c1d	88	57.534	ENSMMUG00000043184	-	100	57.534	Macaca_mulatta
ENSTRUG00000012245	c1d	84	57.857	ENSMMUG00000017209	-	96	57.857	Macaca_mulatta
ENSTRUG00000012245	c1d	84	60.000	ENSMNEG00000040612	C1D	96	60.000	Macaca_nemestrina
ENSTRUG00000012245	c1d	88	58.904	ENSMNEG00000020626	-	100	58.904	Macaca_nemestrina
ENSTRUG00000012245	c1d	84	60.000	ENSMLEG00000027619	C1D	96	60.000	Mandrillus_leucophaeus
ENSTRUG00000012245	c1d	88	58.219	ENSMLEG00000028412	-	100	58.219	Mandrillus_leucophaeus
ENSTRUG00000012245	c1d	90	76.667	ENSMAMG00000022156	c1d	97	76.667	Mastacembelus_armatus
ENSTRUG00000012245	c1d	93	72.727	ENSMZEG00005027343	c1d	98	76.351	Maylandia_zebra
ENSTRUG00000012245	c1d	80	60.606	ENSMGAG00000004517	C1D	93	60.606	Meleagris_gallopavo
ENSTRUG00000012245	c1d	74	65.041	ENSMAUG00000008974	C1d	87	65.041	Mesocricetus_auratus
ENSTRUG00000012245	c1d	78	64.615	ENSMICG00000032141	C1D	87	65.854	Microcebus_murinus
ENSTRUG00000012245	c1d	74	65.041	ENSMOCG00000010860	C1d	87	65.041	Microtus_ochrogaster
ENSTRUG00000012245	c1d	93	73.377	ENSMMOG00000007332	c1d	99	73.377	Mola_mola
ENSTRUG00000012245	c1d	80	62.406	ENSMODG00000003561	C1D	94	62.406	Monodelphis_domestica
ENSTRUG00000012245	c1d	90	75.333	ENSMALG00000020864	c1d	95	79.200	Monopterus_albus
ENSTRUG00000012245	c1d	83	61.594	MGP_CAROLIEiJ_G0016110	C1d	95	66.964	Mus_caroli
ENSTRUG00000012245	c1d	83	61.594	ENSMUSG00000000581	C1d	95	66.964	Mus_musculus
ENSTRUG00000012245	c1d	81	64.179	MGP_PahariEiJ_G0016781	C1d	95	67.857	Mus_pahari
ENSTRUG00000012245	c1d	83	61.594	MGP_SPRETEiJ_G0016952	C1d	95	66.964	Mus_spretus
ENSTRUG00000012245	c1d	83	62.319	ENSMPUG00000006224	C1D	94	62.319	Mustela_putorius_furo
ENSTRUG00000012245	c1d	81	62.687	ENSMLUG00000029990	-	94	62.687	Myotis_lucifugus
ENSTRUG00000012245	c1d	83	63.043	ENSMLUG00000010791	-	94	63.043	Myotis_lucifugus
ENSTRUG00000012245	c1d	83	61.594	ENSMLUG00000024947	-	94	61.594	Myotis_lucifugus
ENSTRUG00000012245	c1d	81	57.037	ENSNGAG00000016675	-	95	57.037	Nannospalax_galili
ENSTRUG00000012245	c1d	70	57.377	ENSNGAG00000012482	-	97	57.377	Nannospalax_galili
ENSTRUG00000012245	c1d	73	62.295	ENSNGAG00000011872	-	87	62.295	Nannospalax_galili
ENSTRUG00000012245	c1d	89	74.324	ENSNBRG00000010704	c1d	98	75.676	Neolamprologus_brichardi
ENSTRUG00000012245	c1d	84	60.000	ENSNLEG00000032919	-	75	60.000	Nomascus_leucogenys
ENSTRUG00000012245	c1d	83	60.145	ENSOPRG00000009586	C1D	94	60.145	Ochotona_princeps
ENSTRUG00000012245	c1d	73	64.754	ENSODEG00000018885	-	88	64.754	Octodon_degus
ENSTRUG00000012245	c1d	71	57.627	ENSODEG00000018525	-	84	57.627	Octodon_degus
ENSTRUG00000012245	c1d	73	64.754	ENSODEG00000011242	-	87	64.754	Octodon_degus
ENSTRUG00000012245	c1d	93	71.613	ENSONIG00000001233	c1d	100	73.718	Oreochromis_niloticus
ENSTRUG00000012245	c1d	57	73.684	ENSOANG00000008385	C1D	98	66.055	Ornithorhynchus_anatinus
ENSTRUG00000012245	c1d	83	60.870	ENSOCUG00000025587	-	94	60.870	Oryctolagus_cuniculus
ENSTRUG00000012245	c1d	83	60.870	ENSOCUG00000009771	-	94	60.870	Oryctolagus_cuniculus
ENSTRUG00000012245	c1d	89	71.622	ENSORLG00000021968	c1d	95	71.622	Oryzias_latipes
ENSTRUG00000012245	c1d	89	72.297	ENSORLG00020000507	c1d	96	72.297	Oryzias_latipes_hni
ENSTRUG00000012245	c1d	89	72.297	ENSORLG00015004594	c1d	94	72.297	Oryzias_latipes_hsok
ENSTRUG00000012245	c1d	89	71.622	ENSOMEG00000004672	c1d	95	71.622	Oryzias_melastigma
ENSTRUG00000012245	c1d	74	62.602	ENSOGAG00000027934	-	87	62.602	Otolemur_garnettii
ENSTRUG00000012245	c1d	83	60.870	ENSOARG00000019931	C1D	94	60.870	Ovis_aries
ENSTRUG00000012245	c1d	83	59.420	ENSPPAG00000040091	-	76	59.420	Pan_paniscus
ENSTRUG00000012245	c1d	84	60.714	ENSPPAG00000037847	-	96	60.714	Pan_paniscus
ENSTRUG00000012245	c1d	83	61.594	ENSPPRG00000017045	-	94	61.594	Panthera_pardus
ENSTRUG00000012245	c1d	55	57.143	ENSPPRG00000022830	-	75	57.143	Panthera_pardus
ENSTRUG00000012245	c1d	83	61.594	ENSPTIG00000009414	C1D	94	61.594	Panthera_tigris_altaica
ENSTRUG00000012245	c1d	84	60.714	ENSPTRG00000023558	C1D	96	60.714	Pan_troglodytes
ENSTRUG00000012245	c1d	88	58.904	ENSPANG00000000501	-	100	58.904	Papio_anubis
ENSTRUG00000012245	c1d	84	60.000	ENSPANG00000002886	C1D	75	60.000	Papio_anubis
ENSTRUG00000012245	c1d	80	60.902	ENSPKIG00000004877	c1d	89	60.902	Paramormyrops_kingsleyae
ENSTRUG00000012245	c1d	79	61.832	ENSPSIG00000010015	C1D	90	61.832	Pelodiscus_sinensis
ENSTRUG00000012245	c1d	87	76.389	ENSPMGG00000009326	c1d	93	76.389	Periophthalmus_magnuspinnatus
ENSTRUG00000012245	c1d	81	57.664	ENSPCIG00000006831	-	93	57.664	Phascolarctos_cinereus
ENSTRUG00000012245	c1d	80	62.406	ENSPCIG00000018629	-	94	62.406	Phascolarctos_cinereus
ENSTRUG00000012245	c1d	90	70.000	ENSPFOG00000003686	c1d	97	70.000	Poecilia_formosa
ENSTRUG00000012245	c1d	90	70.000	ENSPLAG00000000228	c1d	97	73.188	Poecilia_latipinna
ENSTRUG00000012245	c1d	90	70.000	ENSPMEG00000023213	c1d	97	70.000	Poecilia_mexicana
ENSTRUG00000012245	c1d	90	70.667	ENSPREG00000000742	c1d	98	72.143	Poecilia_reticulata
ENSTRUG00000012245	c1d	84	60.714	ENSPPYG00000012354	C1D	74	60.714	Pongo_abelii
ENSTRUG00000012245	c1d	88	57.534	ENSPPYG00000002294	-	100	57.534	Pongo_abelii
ENSTRUG00000012245	c1d	83	52.174	ENSPCAG00000010088	C1D	74	52.174	Procavia_capensis
ENSTRUG00000012245	c1d	78	64.615	ENSPCOG00000016112	C1D	89	64.615	Propithecus_coquereli
ENSTRUG00000012245	c1d	83	61.594	ENSPVAG00000012692	C1D	96	51.412	Pteropus_vampyrus
ENSTRUG00000012245	c1d	70	86.207	ENSPNYG00000008789	c1d	98	75.676	Pundamilia_nyererei
ENSTRUG00000012245	c1d	80	66.917	ENSPNAG00000004219	c1d	91	66.917	Pygocentrus_nattereri
ENSTRUG00000012245	c1d	74	66.667	ENSRNOG00000005982	C1d	87	66.667	Rattus_norvegicus
ENSTRUG00000012245	c1d	84	60.000	ENSRBIG00000026211	-	99	60.000	Rhinopithecus_bieti
ENSTRUG00000012245	c1d	88	58.219	ENSRROG00000005944	-	100	58.219	Rhinopithecus_roxellana
ENSTRUG00000012245	c1d	84	60.000	ENSRROG00000029013	C1D	96	60.000	Rhinopithecus_roxellana
ENSTRUG00000012245	c1d	84	60.714	ENSSBOG00000025275	C1D	96	60.714	Saimiri_boliviensis_boliviensis
ENSTRUG00000012245	c1d	86	57.516	ENSSHAG00000008352	C1D	74	57.516	Sarcophilus_harrisii
ENSTRUG00000012245	c1d	83	62.319	ENSSFOG00015010861	c1d	99	62.319	Scleropages_formosus
ENSTRUG00000012245	c1d	90	73.333	ENSSMAG00000019230	c1d	97	73.333	Scophthalmus_maximus
ENSTRUG00000012245	c1d	90	78.667	ENSSDUG00000020213	c1d	97	78.667	Seriola_dumerili
ENSTRUG00000012245	c1d	90	77.333	ENSSLDG00000017371	c1d	97	77.333	Seriola_lalandi_dorsalis
ENSTRUG00000012245	c1d	71	63.559	ENSSPUG00000006525	C1D	91	59.398	Sphenodon_punctatus
ENSTRUG00000012245	c1d	90	76.000	ENSSPAG00000008574	c1d	97	76.000	Stegastes_partitus
ENSTRUG00000012245	c1d	83	61.594	ENSSSCG00000039331	-	94	61.594	Sus_scrofa
ENSTRUG00000012245	c1d	65	56.481	ENSSSCG00000035701	-	90	56.481	Sus_scrofa
ENSTRUG00000012245	c1d	81	62.222	ENSTGUG00000002367	C1D	94	62.222	Taeniopygia_guttata
ENSTRUG00000012245	c1d	89	88.514	ENSTNIG00000009827	c1d	100	88.514	Tetraodon_nigroviridis
ENSTRUG00000012245	c1d	81	61.940	ENSTBEG00000009797	C1D	94	61.940	Tupaia_belangeri
ENSTRUG00000012245	c1d	84	60.000	ENSTTRG00000013982	C1D	78	60.000	Tursiops_truncatus
ENSTRUG00000012245	c1d	83	55.319	ENSUAMG00000025246	C1D	94	55.319	Ursus_americanus
ENSTRUG00000012245	c1d	83	61.594	ENSUMAG00000021118	-	94	61.594	Ursus_maritimus
ENSTRUG00000012245	c1d	57	54.082	ENSUMAG00000006451	-	86	54.630	Ursus_maritimus
ENSTRUG00000012245	c1d	83	61.594	ENSVPAG00000012080	C1D	75	61.594	Vicugna_pacos
ENSTRUG00000012245	c1d	83	61.594	ENSVVUG00000027629	C1D	83	61.594	Vulpes_vulpes
ENSTRUG00000012245	c1d	73	63.115	ENSXETG00000025934	c1d	84	63.115	Xenopus_tropicalis
ENSTRUG00000012245	c1d	77	76.378	ENSXCOG00000013813	c1d	97	71.333	Xiphophorus_couchianus
ENSTRUG00000012245	c1d	77	77.165	ENSXMAG00000022273	c1d	97	72.000	Xiphophorus_maculatus