EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000012273 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 2060 bases
Position: chr21:2468380-2470439
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000031085	zf-C2H2	PF00096.26	2.4e-59	1	11
ENSTRUP00000031085	zf-C2H2	PF00096.26	2.4e-59	2	11
ENSTRUP00000031085	zf-C2H2	PF00096.26	2.4e-59	3	11
ENSTRUP00000031085	zf-C2H2	PF00096.26	2.4e-59	4	11
ENSTRUP00000031085	zf-C2H2	PF00096.26	2.4e-59	5	11
ENSTRUP00000031085	zf-C2H2	PF00096.26	2.4e-59	6	11
ENSTRUP00000031085	zf-C2H2	PF00096.26	2.4e-59	7	11
ENSTRUP00000031085	zf-C2H2	PF00096.26	2.4e-59	8	11
ENSTRUP00000031085	zf-C2H2	PF00096.26	2.4e-59	9	11
ENSTRUP00000031085	zf-C2H2	PF00096.26	2.4e-59	10	11
ENSTRUP00000031085	zf-C2H2	PF00096.26	2.4e-59	11	11
ENSTRUP00000031085	zf-met	PF12874.7	2.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000031203	-	1284	-	ENSTRUP00000031085	427 (aa)	-	H2U2C4

Gene Model

Click here to download ENSTRUG00000012273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000012273's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000012273	-	94	35.220	ENSTRUG00000011637	scrt1b	96	35.220
ENSTRUG00000012273	-	98	50.896	ENSTRUG00000019483	-	100	50.192
ENSTRUG00000012273	-	86	46.552	ENSTRUG00000015687	-	96	44.688
ENSTRUG00000012273	-	99	52.459	ENSTRUG00000022515	-	88	52.459
ENSTRUG00000012273	-	77	41.176	ENSTRUG00000013850	prdm5	73	41.176
ENSTRUG00000012273	-	76	43.624	ENSTRUG00000022066	-	88	43.624
ENSTRUG00000012273	-	95	46.711	ENSTRUG00000020208	-	95	46.711
ENSTRUG00000012273	-	85	42.994	ENSTRUG00000005321	-	95	49.091
ENSTRUG00000012273	-	93	54.680	ENSTRUG00000023925	-	97	54.680
ENSTRUG00000012273	-	76	39.437	ENSTRUG00000020495	si:dkey-89b17.4	92	30.028
ENSTRUG00000012273	-	82	34.667	ENSTRUG00000025597	znf646	86	34.667
ENSTRUG00000012273	-	75	42.456	ENSTRUG00000024073	-	79	42.456
ENSTRUG00000012273	-	90	48.249	ENSTRUG00000006896	-	95	50.218
ENSTRUG00000012273	-	74	41.860	ENSTRUG00000019558	-	51	41.860
ENSTRUG00000012273	-	75	50.435	ENSTRUG00000004525	gfi1b	54	50.435
ENSTRUG00000012273	-	98	51.887	ENSTRUG00000000995	-	87	51.887
ENSTRUG00000012273	-	82	36.212	ENSTRUG00000008615	zbtb48	54	35.802
ENSTRUG00000012273	-	77	48.214	ENSTRUG00000011385	znf341	52	48.214
ENSTRUG00000012273	-	93	46.250	ENSTRUG00000022905	-	66	46.250
ENSTRUG00000012273	-	72	48.837	ENSTRUG00000023354	-	65	48.837
ENSTRUG00000012273	-	76	56.552	ENSTRUG00000003111	-	82	56.552
ENSTRUG00000012273	-	79	37.241	ENSTRUG00000012157	-	89	36.785
ENSTRUG00000012273	-	74	37.705	ENSTRUG00000024008	-	67	32.093
ENSTRUG00000012273	-	71	43.636	ENSTRUG00000003369	sall3b	58	42.029
ENSTRUG00000012273	-	98	55.280	ENSTRUG00000007022	-	95	55.897
ENSTRUG00000012273	-	76	59.028	ENSTRUG00000005180	-	85	59.028
ENSTRUG00000012273	-	76	38.318	ENSTRUG00000022843	-	68	38.700
ENSTRUG00000012273	-	74	54.225	ENSTRUG00000023491	-	57	54.225
ENSTRUG00000012273	-	75	31.532	ENSTRUG00000019941	-	53	31.532
ENSTRUG00000012273	-	79	36.522	ENSTRUG00000019685	znf319b	85	35.362
ENSTRUG00000012273	-	72	52.542	ENSTRUG00000022969	-	66	52.542
ENSTRUG00000012273	-	82	39.706	ENSTRUG00000025588	snai2	67	39.706
ENSTRUG00000012273	-	74	50.000	ENSTRUG00000003277	zbtb17	96	50.000
ENSTRUG00000012273	-	75	55.769	ENSTRUG00000013906	-	96	55.769
ENSTRUG00000012273	-	99	47.191	ENSTRUG00000001268	-	95	53.185
ENSTRUG00000012273	-	72	40.449	ENSTRUG00000021167	-	50	40.449
ENSTRUG00000012273	-	79	40.777	ENSTRUG00000003454	-	74	40.777
ENSTRUG00000012273	-	76	54.709	ENSTRUG00000022919	-	78	54.709
ENSTRUG00000012273	-	72	32.841	ENSTRUG00000005241	gtf3ab	77	32.841
ENSTRUG00000012273	-	85	45.122	ENSTRUG00000017456	znf236	68	45.122
ENSTRUG00000012273	-	80	48.175	ENSTRUG00000022076	-	80	48.175
ENSTRUG00000012273	-	75	66.667	ENSTRUG00000025189	-	79	66.667
ENSTRUG00000012273	-	74	42.202	ENSTRUG00000016405	znf652	60	39.891
ENSTRUG00000012273	-	81	32.948	ENSTRUG00000014476	-	85	33.884
ENSTRUG00000012273	-	75	43.262	ENSTRUG00000025881	-	66	42.751
ENSTRUG00000012273	-	74	33.721	ENSTRUG00000001452	PRDM15	53	33.721
ENSTRUG00000012273	-	99	45.872	ENSTRUG00000020582	-	93	50.472
ENSTRUG00000012273	-	76	44.681	ENSTRUG00000005880	-	64	44.681
ENSTRUG00000012273	-	99	56.098	ENSTRUG00000021765	-	83	56.098
ENSTRUG00000012273	-	79	34.783	ENSTRUG00000000419	sna2	86	33.333
ENSTRUG00000012273	-	99	48.810	ENSTRUG00000022206	-	86	50.213
ENSTRUG00000012273	-	98	43.421	ENSTRUG00000018659	prdm12b	56	43.421
ENSTRUG00000012273	-	75	44.590	ENSTRUG00000021675	-	93	41.379
ENSTRUG00000012273	-	80	34.302	ENSTRUG00000015366	patz1	57	34.302

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000012273	-	74	54.082	ENSAPOG00000005767	-	100	54.082	Acanthochromis_polyacanthus
ENSTRUG00000012273	-	90	50.649	ENSAOCG00000000570	-	95	51.748	Amphiprion_ocellaris
ENSTRUG00000012273	-	91	46.875	ENSAPEG00000018796	-	93	50.435	Amphiprion_percula
ENSTRUG00000012273	-	74	42.188	ENSCVAG00000018507	-	80	40.580	Cyprinodon_variegatus
ENSTRUG00000012273	-	79	37.299	ENSFHEG00000022534	-	79	37.299	Fundulus_heteroclitus
ENSTRUG00000012273	-	90	49.020	ENSKMAG00000013745	-	88	44.978	Kryptolebias_marmoratus
ENSTRUG00000012273	-	92	38.158	ENSMAMG00000009817	-	70	43.750	Mastacembelus_armatus
ENSTRUG00000012273	-	98	55.598	ENSMAMG00000018114	-	93	52.609	Mastacembelus_armatus
ENSTRUG00000012273	-	90	58.407	ENSMZEG00005016808	-	96	58.079	Maylandia_zebra
ENSTRUG00000012273	-	94	54.839	ENSMALG00000008930	-	95	48.810	Monopterus_albus
ENSTRUG00000012273	-	77	54.749	ENSMALG00000004579	-	98	54.749	Monopterus_albus
ENSTRUG00000012273	-	80	55.747	ENSMALG00000012116	-	99	55.747	Monopterus_albus
ENSTRUG00000012273	-	80	55.290	ENSMALG00000001085	-	94	55.290	Monopterus_albus
ENSTRUG00000012273	-	90	51.181	ENSMALG00000012757	-	89	51.181	Monopterus_albus
ENSTRUG00000012273	-	86	55.000	ENSNBRG00000013501	-	98	55.000	Neolamprologus_brichardi
ENSTRUG00000012273	-	77	37.209	ENSOMEG00000021420	-	78	37.209	Oryzias_melastigma
ENSTRUG00000012273	-	76	36.822	ENSPREG00000014898	-	62	36.822	Poecilia_reticulata
ENSTRUG00000012273	-	88	46.581	ENSPNYG00000007756	-	95	46.581	Pundamilia_nyererei
ENSTRUG00000012273	-	77	53.927	ENSSDUG00000001263	-	93	53.927	Seriola_dumerili
ENSTRUG00000012273	-	94	40.523	ENSSLDG00000023661	-	99	40.523	Seriola_lalandi_dorsalis
ENSTRUG00000012273	-	73	95.192	ENSTNIG00000005856	-	99	95.192	Tetraodon_nigroviridis
ENSTRUG00000012273	-	90	44.712	ENSXCOG00000019492	-	98	44.712	Xiphophorus_couchianus
ENSTRUG00000012273	-	80	48.018	ENSXMAG00000022297	-	99	48.018	Xiphophorus_maculatus