EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000012283 (Gene tree)
Gene ID: 101069088
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: RNA pseudouridylate synthase domain-containing protein 4-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 2506 bases
Position: chr19:5367585-5370090
Accession: 101069088
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000031116	PseudoU_synth_2	PF00849.22	5.3e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000031234	-	1498	XM_003973281	ENSTRUP00000031116	385 (aa)	XP_003973330	H2U2F5

Gene Model

Click here to download ENSTRUG00000012283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000012283's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000012283	rpusd4	83	50.154	ENSG00000165526	RPUSD4	86	49.697	Homo_sapiens
ENSTRUG00000012283	rpusd4	99	68.041	ENSAPOG00000011024	rpusd4	98	68.041	Acanthochromis_polyacanthus
ENSTRUG00000012283	rpusd4	61	55.556	ENSAMEG00000005953	-	94	55.556	Ailuropoda_melanoleuca
ENSTRUG00000012283	rpusd4	84	51.818	ENSAMEG00000000127	-	86	51.818	Ailuropoda_melanoleuca
ENSTRUG00000012283	rpusd4	83	73.041	ENSACIG00000003533	rpusd4	94	73.041	Amphilophus_citrinellus
ENSTRUG00000012283	rpusd4	100	67.095	ENSAOCG00000015409	rpusd4	97	67.095	Amphiprion_ocellaris
ENSTRUG00000012283	rpusd4	100	67.352	ENSAPEG00000018935	rpusd4	97	67.352	Amphiprion_percula
ENSTRUG00000012283	rpusd4	98	67.801	ENSATEG00000008059	rpusd4	95	67.801	Anabas_testudineus
ENSTRUG00000012283	rpusd4	72	51.071	ENSAPLG00000013250	RPUSD4	95	51.246	Anas_platyrhynchos
ENSTRUG00000012283	rpusd4	85	48.657	ENSACAG00000000189	RPUSD4	90	48.657	Anolis_carolinensis
ENSTRUG00000012283	rpusd4	84	48.788	ENSANAG00000024050	RPUSD4	87	48.788	Aotus_nancymaae
ENSTRUG00000012283	rpusd4	99	68.734	ENSACLG00000020996	rpusd4	99	68.734	Astatotilapia_calliptera
ENSTRUG00000012283	rpusd4	88	56.034	ENSAMXG00000031479	rpusd4	96	56.433	Astyanax_mexicanus
ENSTRUG00000012283	rpusd4	84	50.610	ENSBTAG00000020900	RPUSD4	86	50.610	Bos_taurus
ENSTRUG00000012283	rpusd4	84	49.091	ENSCJAG00000042850	RPUSD4	82	49.091	Callithrix_jacchus
ENSTRUG00000012283	rpusd4	84	52.424	ENSCAFG00000010488	RPUSD4	86	52.424	Canis_familiaris
ENSTRUG00000012283	rpusd4	84	52.424	ENSCAFG00020010621	RPUSD4	86	52.424	Canis_lupus_dingo
ENSTRUG00000012283	rpusd4	84	50.305	ENSCHIG00000009975	RPUSD4	85	50.305	Capra_hircus
ENSTRUG00000012283	rpusd4	84	50.760	ENSTSYG00000008456	RPUSD4	86	50.760	Carlito_syrichta
ENSTRUG00000012283	rpusd4	63	49.180	ENSCAPG00000006040	RPUSD4	92	49.180	Cavia_aperea
ENSTRUG00000012283	rpusd4	84	51.524	ENSCPOG00000014971	RPUSD4	86	51.524	Cavia_porcellus
ENSTRUG00000012283	rpusd4	84	49.091	ENSCCAG00000027838	RPUSD4	87	49.091	Cebus_capucinus
ENSTRUG00000012283	rpusd4	85	48.955	ENSCATG00000041570	RPUSD4	88	48.955	Cercocebus_atys
ENSTRUG00000012283	rpusd4	84	52.121	ENSCLAG00000016553	RPUSD4	86	52.121	Chinchilla_lanigera
ENSTRUG00000012283	rpusd4	85	49.254	ENSCSAG00000002274	RPUSD4	88	49.254	Chlorocebus_sabaeus
ENSTRUG00000012283	rpusd4	71	52.536	ENSCHOG00000010249	RPUSD4	96	52.536	Choloepus_hoffmanni
ENSTRUG00000012283	rpusd4	75	52.218	ENSCPBG00000011175	RPUSD4	100	52.218	Chrysemys_picta_bellii
ENSTRUG00000012283	rpusd4	70	38.351	ENSCSAVG00000000872	-	54	38.351	Ciona_savignyi
ENSTRUG00000012283	rpusd4	85	49.254	ENSCANG00000039684	RPUSD4	86	50.000	Colobus_angolensis_palliatus
ENSTRUG00000012283	rpusd4	84	50.909	ENSCGRG00001024141	Rpusd4	86	50.909	Cricetulus_griseus_chok1gshd
ENSTRUG00000012283	rpusd4	84	50.909	ENSCGRG00000014415	Rpusd4	86	50.909	Cricetulus_griseus_crigri
ENSTRUG00000012283	rpusd4	98	62.629	ENSCVAG00000000392	rpusd4	98	67.536	Cyprinodon_variegatus
ENSTRUG00000012283	rpusd4	98	62.597	ENSCVAG00000008761	rpusd4	98	62.725	Cyprinodon_variegatus
ENSTRUG00000012283	rpusd4	88	55.814	ENSDARG00000012674	rpusd4	94	55.814	Danio_rerio
ENSTRUG00000012283	rpusd4	84	50.000	ENSDNOG00000020026	RPUSD4	86	50.000	Dasypus_novemcinctus
ENSTRUG00000012283	rpusd4	84	50.909	ENSDORG00000016717	Rpusd4	86	50.909	Dipodomys_ordii
ENSTRUG00000012283	rpusd4	84	51.524	ENSETEG00000013953	RPUSD4	87	52.134	Echinops_telfairi
ENSTRUG00000012283	rpusd4	84	50.456	ENSEASG00005022982	RPUSD4	86	50.456	Equus_asinus_asinus
ENSTRUG00000012283	rpusd4	84	50.760	ENSECAG00000000557	RPUSD4	86	50.760	Equus_caballus
ENSTRUG00000012283	rpusd4	66	55.556	ENSEEUG00000014036	RPUSD4	68	55.556	Erinaceus_europaeus
ENSTRUG00000012283	rpusd4	90	56.825	ENSELUG00000008075	rpusd4	92	56.825	Esox_lucius
ENSTRUG00000012283	rpusd4	92	48.199	ENSFCAG00000029789	RPUSD4	93	48.753	Felis_catus
ENSTRUG00000012283	rpusd4	83	48.148	ENSFALG00000005171	RPUSD4	95	48.148	Ficedula_albicollis
ENSTRUG00000012283	rpusd4	84	50.303	ENSFDAG00000014307	RPUSD4	87	50.303	Fukomys_damarensis
ENSTRUG00000012283	rpusd4	98	66.494	ENSFHEG00000004329	rpusd4	98	66.494	Fundulus_heteroclitus
ENSTRUG00000012283	rpusd4	84	59.259	ENSGMOG00000017726	rpusd4	98	59.202	Gadus_morhua
ENSTRUG00000012283	rpusd4	72	54.286	ENSGALG00000024326	RPUSD4	92	49.541	Gallus_gallus
ENSTRUG00000012283	rpusd4	93	66.667	ENSGAFG00000021559	rpusd4	95	66.667	Gambusia_affinis
ENSTRUG00000012283	rpusd4	84	72.477	ENSGACG00000001657	rpusd4	97	75.812	Gasterosteus_aculeatus
ENSTRUG00000012283	rpusd4	84	48.632	ENSGAGG00000000132	RPUSD4	91	48.632	Gopherus_agassizii
ENSTRUG00000012283	rpusd4	83	50.154	ENSGGOG00000016494	RPUSD4	86	49.697	Gorilla_gorilla
ENSTRUG00000012283	rpusd4	99	68.475	ENSHBUG00000022838	rpusd4	99	68.475	Haplochromis_burtoni
ENSTRUG00000012283	rpusd4	84	51.515	ENSHGLG00000002285	RPUSD4	86	51.515	Heterocephalus_glaber_female
ENSTRUG00000012283	rpusd4	84	51.515	ENSHGLG00100006385	RPUSD4	86	51.515	Heterocephalus_glaber_male
ENSTRUG00000012283	rpusd4	99	64.175	ENSHCOG00000006612	rpusd4	99	64.175	Hippocampus_comes
ENSTRUG00000012283	rpusd4	91	53.782	ENSIPUG00000023879	rusd4	90	53.782	Ictalurus_punctatus
ENSTRUG00000012283	rpusd4	84	51.524	ENSSTOG00000025280	RPUSD4	89	51.524	Ictidomys_tridecemlineatus
ENSTRUG00000012283	rpusd4	83	51.543	ENSJJAG00000018673	Rpusd4	86	51.543	Jaculus_jaculus
ENSTRUG00000012283	rpusd4	89	70.286	ENSKMAG00000021805	rpusd4	91	70.286	Kryptolebias_marmoratus
ENSTRUG00000012283	rpusd4	99	65.897	ENSLBEG00000020394	rpusd4	93	74.848	Labrus_bergylta
ENSTRUG00000012283	rpusd4	83	53.231	ENSLACG00000011028	RPUSD4	86	51.163	Latimeria_chalumnae
ENSTRUG00000012283	rpusd4	89	42.000	ENSLOCG00000003124	rpusd4	92	42.000	Lepisosteus_oculatus
ENSTRUG00000012283	rpusd4	84	51.976	ENSLAFG00000005211	RPUSD4	100	44.746	Loxodonta_africana
ENSTRUG00000012283	rpusd4	85	49.254	ENSMFAG00000039513	RPUSD4	88	49.254	Macaca_fascicularis
ENSTRUG00000012283	rpusd4	85	48.955	ENSMMUG00000007933	RPUSD4	88	48.955	Macaca_mulatta
ENSTRUG00000012283	rpusd4	85	49.254	ENSMNEG00000027414	RPUSD4	88	49.254	Macaca_nemestrina
ENSTRUG00000012283	rpusd4	85	49.254	ENSMLEG00000042461	RPUSD4	88	49.254	Mandrillus_leucophaeus
ENSTRUG00000012283	rpusd4	99	66.497	ENSMAMG00000023839	rpusd4	99	66.497	Mastacembelus_armatus
ENSTRUG00000012283	rpusd4	99	68.992	ENSMZEG00005011999	rpusd4	99	68.992	Maylandia_zebra
ENSTRUG00000012283	rpusd4	71	53.571	ENSMGAG00000000840	RPUSD4	98	49.375	Meleagris_gallopavo
ENSTRUG00000012283	rpusd4	84	50.303	ENSMAUG00000010280	Rpusd4	86	50.303	Mesocricetus_auratus
ENSTRUG00000012283	rpusd4	85	51.343	ENSMICG00000015979	RPUSD4	89	53.488	Microcebus_murinus
ENSTRUG00000012283	rpusd4	84	50.303	ENSMOCG00000000661	Rpusd4	86	50.303	Microtus_ochrogaster
ENSTRUG00000012283	rpusd4	80	76.547	ENSMMOG00000021731	rpusd4	92	76.547	Mola_mola
ENSTRUG00000012283	rpusd4	81	51.097	ENSMODG00000004521	RPUSD4	80	51.097	Monodelphis_domestica
ENSTRUG00000012283	rpusd4	81	74.277	ENSMALG00000005839	rpusd4	96	73.186	Monopterus_albus
ENSTRUG00000012283	rpusd4	84	51.212	MGP_CAROLIEiJ_G0031954	Rpusd4	86	51.212	Mus_caroli
ENSTRUG00000012283	rpusd4	84	51.212	ENSMUSG00000032044	Rpusd4	86	51.212	Mus_musculus
ENSTRUG00000012283	rpusd4	84	50.909	MGP_PahariEiJ_G0014819	Rpusd4	86	50.909	Mus_pahari
ENSTRUG00000012283	rpusd4	84	50.909	MGP_SPRETEiJ_G0033078	Rpusd4	86	50.909	Mus_spretus
ENSTRUG00000012283	rpusd4	84	52.121	ENSMPUG00000006608	RPUSD4	86	52.121	Mustela_putorius_furo
ENSTRUG00000012283	rpusd4	90	49.432	ENSMLUG00000017328	-	89	50.000	Myotis_lucifugus
ENSTRUG00000012283	rpusd4	66	50.965	ENSMLUG00000029348	-	100	50.965	Myotis_lucifugus
ENSTRUG00000012283	rpusd4	84	53.172	ENSNGAG00000020847	Rpusd4	86	53.172	Nannospalax_galili
ENSTRUG00000012283	rpusd4	84	75.232	ENSNBRG00000005207	rpusd4	94	75.232	Neolamprologus_brichardi
ENSTRUG00000012283	rpusd4	85	48.657	ENSNLEG00000007465	RPUSD4	88	48.657	Nomascus_leucogenys
ENSTRUG00000012283	rpusd4	84	50.303	ENSMEUG00000004370	RPUSD4	88	50.303	Notamacropus_eugenii
ENSTRUG00000012283	rpusd4	84	51.212	ENSODEG00000004577	RPUSD4	86	51.212	Octodon_degus
ENSTRUG00000012283	rpusd4	99	68.734	ENSONIG00000018879	rpusd4	99	68.734	Oreochromis_niloticus
ENSTRUG00000012283	rpusd4	76	47.987	ENSOANG00000007247	RPUSD4	95	47.841	Ornithorhynchus_anatinus
ENSTRUG00000012283	rpusd4	84	50.909	ENSOCUG00000017039	RPUSD4	86	50.909	Oryctolagus_cuniculus
ENSTRUG00000012283	rpusd4	89	63.897	ENSORLG00000002750	rpusd4	92	65.579	Oryzias_latipes
ENSTRUG00000012283	rpusd4	92	62.849	ENSORLG00020002044	rpusd4	89	62.849	Oryzias_latipes_hni
ENSTRUG00000012283	rpusd4	91	62.570	ENSORLG00015020034	rpusd4	89	62.570	Oryzias_latipes_hsok
ENSTRUG00000012283	rpusd4	94	65.135	ENSOMEG00000004861	rpusd4	92	65.135	Oryzias_melastigma
ENSTRUG00000012283	rpusd4	83	52.000	ENSOGAG00000008922	RPUSD4	86	51.818	Otolemur_garnettii
ENSTRUG00000012283	rpusd4	84	50.305	ENSOARG00000012238	RPUSD4	85	50.305	Ovis_aries
ENSTRUG00000012283	rpusd4	83	50.154	ENSPPAG00000042883	RPUSD4	80	49.697	Pan_paniscus
ENSTRUG00000012283	rpusd4	84	51.818	ENSPPRG00000003081	RPUSD4	93	48.753	Panthera_pardus
ENSTRUG00000012283	rpusd4	84	51.818	ENSPTIG00000012059	RPUSD4	93	48.753	Panthera_tigris_altaica
ENSTRUG00000012283	rpusd4	83	50.154	ENSPTRG00000004454	RPUSD4	86	49.697	Pan_troglodytes
ENSTRUG00000012283	rpusd4	85	49.254	ENSPANG00000015040	RPUSD4	88	49.254	Papio_anubis
ENSTRUG00000012283	rpusd4	90	56.609	ENSPKIG00000023986	rpusd4	88	56.609	Paramormyrops_kingsleyae
ENSTRUG00000012283	rpusd4	76	52.703	ENSPSIG00000014268	RPUSD4	93	52.703	Pelodiscus_sinensis
ENSTRUG00000012283	rpusd4	93	62.983	ENSPMGG00000002806	rpusd4	97	62.108	Periophthalmus_magnuspinnatus
ENSTRUG00000012283	rpusd4	84	43.333	ENSPEMG00000000278	Rpusd4	85	43.333	Peromyscus_maniculatus_bairdii
ENSTRUG00000012283	rpusd4	76	41.975	ENSPMAG00000008183	rpusd4	94	41.975	Petromyzon_marinus
ENSTRUG00000012283	rpusd4	84	50.456	ENSPCIG00000010212	RPUSD4	89	50.456	Phascolarctos_cinereus
ENSTRUG00000012283	rpusd4	93	65.054	ENSPFOG00000019030	rpusd4	98	65.054	Poecilia_formosa
ENSTRUG00000012283	rpusd4	98	63.683	ENSPLAG00000016848	rpusd4	98	63.683	Poecilia_latipinna
ENSTRUG00000012283	rpusd4	98	62.660	ENSPMEG00000017534	rpusd4	98	62.660	Poecilia_mexicana
ENSTRUG00000012283	rpusd4	97	63.636	ENSPREG00000005689	rpusd4	98	63.636	Poecilia_reticulata
ENSTRUG00000012283	rpusd4	84	49.091	ENSPPYG00000004043	RPUSD4	86	49.091	Pongo_abelii
ENSTRUG00000012283	rpusd4	65	52.222	ENSPCAG00000000753	RPUSD4	69	53.333	Procavia_capensis
ENSTRUG00000012283	rpusd4	84	48.024	ENSPCOG00000020694	RPUSD4	87	48.024	Propithecus_coquereli
ENSTRUG00000012283	rpusd4	84	50.303	ENSPVAG00000000988	RPUSD4	87	50.303	Pteropus_vampyrus
ENSTRUG00000012283	rpusd4	99	68.217	ENSPNYG00000009652	rpusd4	99	68.217	Pundamilia_nyererei
ENSTRUG00000012283	rpusd4	96	52.688	ENSPNAG00000012264	rpusd4	98	52.688	Pygocentrus_nattereri
ENSTRUG00000012283	rpusd4	84	50.909	ENSRNOG00000011567	Rpusd4	86	50.909	Rattus_norvegicus
ENSTRUG00000012283	rpusd4	84	49.547	ENSRBIG00000034842	RPUSD4	88	48.955	Rhinopithecus_bieti
ENSTRUG00000012283	rpusd4	84	49.547	ENSRROG00000039753	RPUSD4	88	48.955	Rhinopithecus_roxellana
ENSTRUG00000012283	rpusd4	84	48.485	ENSSBOG00000030413	RPUSD4	87	48.485	Saimiri_boliviensis_boliviensis
ENSTRUG00000012283	rpusd4	79	51.792	ENSSHAG00000008304	RPUSD4	100	51.792	Sarcophilus_harrisii
ENSTRUG00000012283	rpusd4	83	56.098	ENSSFOG00015006203	rpusd4	88	56.707	Scleropages_formosus
ENSTRUG00000012283	rpusd4	99	67.969	ENSSMAG00000020978	rpusd4	98	69.272	Scophthalmus_maximus
ENSTRUG00000012283	rpusd4	98	69.737	ENSSDUG00000013399	rpusd4	99	69.737	Seriola_dumerili
ENSTRUG00000012283	rpusd4	99	69.610	ENSSLDG00000023507	rpusd4	100	69.610	Seriola_lalandi_dorsalis
ENSTRUG00000012283	rpusd4	87	49.709	ENSSPUG00000001401	RPUSD4	94	50.578	Sphenodon_punctatus
ENSTRUG00000012283	rpusd4	99	65.296	ENSSPAG00000012163	rpusd4	99	65.296	Stegastes_partitus
ENSTRUG00000012283	rpusd4	84	50.152	ENSSSCG00000015233	RPUSD4	86	50.152	Sus_scrofa
ENSTRUG00000012283	rpusd4	78	50.000	ENSTGUG00000000773	RPUSD4	99	50.000	Taeniopygia_guttata
ENSTRUG00000012283	rpusd4	99	77.778	ENSTNIG00000014676	rpusd4	99	77.778	Tetraodon_nigroviridis
ENSTRUG00000012283	rpusd4	84	50.152	ENSTTRG00000001555	RPUSD4	86	50.760	Tursiops_truncatus
ENSTRUG00000012283	rpusd4	84	52.424	ENSUMAG00000002219	RPUSD4	86	52.424	Ursus_maritimus
ENSTRUG00000012283	rpusd4	59	48.035	ENSVPAG00000001066	RPUSD4	85	48.035	Vicugna_pacos
ENSTRUG00000012283	rpusd4	84	52.424	ENSVVUG00000020101	RPUSD4	86	52.424	Vulpes_vulpes
ENSTRUG00000012283	rpusd4	93	67.297	ENSXCOG00000004676	rpusd4	95	67.297	Xiphophorus_couchianus
ENSTRUG00000012283	rpusd4	93	67.027	ENSXMAG00000023351	rpusd4	95	67.027	Xiphophorus_maculatus