EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000012307 (Gene tree)
Gene ID: 101077855
Gene Symbol: vars
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 7341 bases
Position: chr7:13800940-13808280
Accession: 101077855
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000031169	tRNA-synt_1g	PF09334.11	2.3e-12	1	1
ENSTRUP00000031169	Anticodon_1	PF08264.13	6.8e-11	1	1
ENSTRUP00000031169	tRNA-synt_1	PF00133.22	8.3e-188	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000031289	-	3099	XM_003966333	ENSTRUP00000031169	1032 (aa)	XP_003966382	H2U2K8

Gene Model

Click here to download ENSTRUG00000012307's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000012307's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000012307	vars	70	52.767	ENSTRUG00000005264	vars2	70	52.632

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000012307	vars	98	64.279	ENSG00000204394	VARS	94	70.382	Homo_sapiens
ENSTRUG00000012307	vars	98	81.506	ENSAPOG00000020921	vars	84	81.531	Acanthochromis_polyacanthus
ENSTRUG00000012307	vars	98	81.506	ENSAPOG00000020691	vars	84	81.531	Acanthochromis_polyacanthus
ENSTRUG00000012307	vars	96	65.024	ENSAMEG00000006417	VARS	81	65.082	Ailuropoda_melanoleuca
ENSTRUG00000012307	vars	98	82.387	ENSACIG00000013752	vars	82	82.415	Amphilophus_citrinellus
ENSTRUG00000012307	vars	98	82.520	ENSAOCG00000002447	vars	82	82.549	Amphiprion_ocellaris
ENSTRUG00000012307	vars	98	81.602	ENSAPEG00000010638	vars	81	81.627	Amphiprion_percula
ENSTRUG00000012307	vars	98	82.039	ENSATEG00000020219	vars	82	82.066	Anabas_testudineus
ENSTRUG00000012307	vars	96	66.348	ENSACAG00000029133	-	91	67.950	Anolis_carolinensis
ENSTRUG00000012307	vars	98	63.723	ENSANAG00000015453	VARS	82	64.547	Aotus_nancymaae
ENSTRUG00000012307	vars	98	81.481	ENSACLG00000025699	vars	79	81.506	Astatotilapia_calliptera
ENSTRUG00000012307	vars	97	78.487	ENSAMXG00000017716	vars	81	78.600	Astyanax_mexicanus
ENSTRUG00000012307	vars	98	64.374	ENSBTAG00000005631	VARS	82	64.430	Bos_taurus
ENSTRUG00000012307	vars	98	63.662	ENSCJAG00000002604	VARS	82	63.619	Callithrix_jacchus
ENSTRUG00000012307	vars	96	64.507	ENSCAFG00000000636	VARS	81	64.660	Canis_familiaris
ENSTRUG00000012307	vars	96	64.410	ENSCAFG00020020790	VARS	83	64.563	Canis_lupus_dingo
ENSTRUG00000012307	vars	96	65.686	ENSCHIG00000011008	VARS	81	65.686	Capra_hircus
ENSTRUG00000012307	vars	98	63.897	ENSTSYG00000001567	VARS	82	63.854	Carlito_syrichta
ENSTRUG00000012307	vars	85	68.688	ENSCAPG00000013736	VARS	78	68.660	Cavia_aperea
ENSTRUG00000012307	vars	97	63.977	ENSCPOG00000000870	VARS	82	63.934	Cavia_porcellus
ENSTRUG00000012307	vars	98	64.088	ENSCCAG00000035656	VARS	82	64.046	Cebus_capucinus
ENSTRUG00000012307	vars	96	65.087	ENSCATG00000022394	VARS	81	65.146	Cercocebus_atys
ENSTRUG00000012307	vars	89	65.667	ENSCLAG00000009470	VARS	77	66.144	Chinchilla_lanigera
ENSTRUG00000012307	vars	98	64.183	ENSCSAG00000008784	VARS	82	64.238	Chlorocebus_sabaeus
ENSTRUG00000012307	vars	70	77.463	ENSCPBG00000007943	VARS	74	77.748	Chrysemys_picta_bellii
ENSTRUG00000012307	vars	98	64.374	ENSCANG00000033570	VARS	82	64.430	Colobus_angolensis_palliatus
ENSTRUG00000012307	vars	98	64.279	ENSCGRG00001005686	Vars	82	64.238	Cricetulus_griseus_chok1gshd
ENSTRUG00000012307	vars	89	62.027	ENSCGRG00000013352	Vars	62	62.708	Cricetulus_griseus_crigri
ENSTRUG00000012307	vars	96	80.769	ENSCSEG00000019652	vars	81	80.792	Cynoglossus_semilaevis
ENSTRUG00000012307	vars	98	81.048	ENSCVAG00000022398	vars	82	81.202	Cyprinodon_variegatus
ENSTRUG00000012307	vars	97	77.321	ENSDARG00000044575	vars	82	77.756	Danio_rerio
ENSTRUG00000012307	vars	75	71.801	ENSDORG00000016433	Vars	72	72.035	Dipodomys_ordii
ENSTRUG00000012307	vars	64	68.761	ENSETEG00000003824	VARS	60	68.716	Echinops_telfairi
ENSTRUG00000012307	vars	51	65.562	ENSEBUG00000007086	vars	66	65.677	Eptatretus_burgeri
ENSTRUG00000012307	vars	50	65.720	ENSEBUG00000004637	vars	70	65.840	Eptatretus_burgeri
ENSTRUG00000012307	vars	98	64.374	ENSEASG00005015673	VARS	82	64.430	Equus_asinus_asinus
ENSTRUG00000012307	vars	98	64.313	ENSECAG00000014620	VARS	82	64.368	Equus_caballus
ENSTRUG00000012307	vars	62	65.509	ENSEEUG00000004116	VARS	54	64.912	Erinaceus_europaeus
ENSTRUG00000012307	vars	96	78.173	ENSELUG00000006550	vars	79	78.420	Esox_lucius
ENSTRUG00000012307	vars	96	65.087	ENSFCAG00000004510	VARS	81	65.049	Felis_catus
ENSTRUG00000012307	vars	88	67.588	ENSFDAG00000011401	VARS	90	67.631	Fukomys_damarensis
ENSTRUG00000012307	vars	97	80.424	ENSFHEG00000010672	vars	81	81.033	Fundulus_heteroclitus
ENSTRUG00000012307	vars	97	74.665	ENSGMOG00000014908	vars	80	75.432	Gadus_morhua
ENSTRUG00000012307	vars	98	81.202	ENSGAFG00000021630	vars	82	81.358	Gambusia_affinis
ENSTRUG00000012307	vars	98	77.040	ENSGACG00000009601	vars	82	77.714	Gasterosteus_aculeatus
ENSTRUG00000012307	vars	59	59.091	ENSGAGG00000006508	-	91	61.564	Gopherus_agassizii
ENSTRUG00000012307	vars	98	64.279	ENSGGOG00000011364	VARS	82	64.238	Gorilla_gorilla
ENSTRUG00000012307	vars	98	81.292	ENSHBUG00000017151	vars	79	81.411	Haplochromis_burtoni
ENSTRUG00000012307	vars	97	63.942	ENSHGLG00000011646	VARS	82	64.093	Heterocephalus_glaber_female
ENSTRUG00000012307	vars	90	63.163	ENSHGLG00100018062	VARS	78	63.433	Heterocephalus_glaber_male
ENSTRUG00000012307	vars	97	80.710	ENSHCOG00000012198	vars	81	80.985	Hippocampus_comes
ENSTRUG00000012307	vars	97	79.307	ENSIPUG00000005218	vars	80	79.423	Ictalurus_punctatus
ENSTRUG00000012307	vars	98	64.088	ENSSTOG00000013112	VARS	82	64.238	Ictidomys_tridecemlineatus
ENSTRUG00000012307	vars	98	52.534	ENSJJAG00000015343	-	81	54.286	Jaculus_jaculus
ENSTRUG00000012307	vars	98	64.054	ENSJJAG00000019749	-	82	63.724	Jaculus_jaculus
ENSTRUG00000012307	vars	96	82.772	ENSKMAG00000009455	vars	81	82.772	Kryptolebias_marmoratus
ENSTRUG00000012307	vars	96	83.433	ENSLBEG00000010341	vars	81	83.466	Labrus_bergylta
ENSTRUG00000012307	vars	98	62.819	ENSLACG00000015232	VARS	87	64.360	Latimeria_chalumnae
ENSTRUG00000012307	vars	98	70.897	ENSLOCG00000004240	vars	82	71.073	Lepisosteus_oculatus
ENSTRUG00000012307	vars	98	63.671	ENSLAFG00000023090	VARS	82	63.724	Loxodonta_africana
ENSTRUG00000012307	vars	98	64.279	ENSMFAG00000001032	VARS	82	64.334	Macaca_fascicularis
ENSTRUG00000012307	vars	98	64.279	ENSMMUG00000006828	VARS	82	64.334	Macaca_mulatta
ENSTRUG00000012307	vars	98	64.279	ENSMNEG00000042072	VARS	82	64.334	Macaca_nemestrina
ENSTRUG00000012307	vars	98	64.279	ENSMLEG00000039307	VARS	82	64.430	Mandrillus_leucophaeus
ENSTRUG00000012307	vars	98	81.853	ENSMAMG00000003949	vars	81	83.400	Mastacembelus_armatus
ENSTRUG00000012307	vars	98	81.387	ENSMZEG00005018327	vars	81	81.683	Maylandia_zebra
ENSTRUG00000012307	vars	98	63.801	ENSMAUG00000006715	Vars	82	63.854	Mesocricetus_auratus
ENSTRUG00000012307	vars	98	63.723	ENSMICG00000003548	VARS	82	64.046	Microcebus_murinus
ENSTRUG00000012307	vars	98	62.967	ENSMOCG00000015404	Vars	82	63.112	Microtus_ochrogaster
ENSTRUG00000012307	vars	98	84.902	ENSMMOG00000015801	vars	81	84.314	Mola_mola
ENSTRUG00000012307	vars	98	64.088	ENSMODG00000015204	-	82	64.142	Monodelphis_domestica
ENSTRUG00000012307	vars	96	83.399	ENSMALG00000022532	vars	81	83.532	Monopterus_albus
ENSTRUG00000012307	vars	98	64.723	MGP_CAROLIEiJ_G0021491	Vars	82	64.779	Mus_caroli
ENSTRUG00000012307	vars	98	64.532	ENSMUSG00000007029	Vars	82	64.587	Mus_musculus
ENSTRUG00000012307	vars	98	64.272	MGP_PahariEiJ_G0020486	Vars	82	64.491	Mus_pahari
ENSTRUG00000012307	vars	98	64.627	MGP_SPRETEiJ_G0022396	Vars	82	64.683	Mus_spretus
ENSTRUG00000012307	vars	96	64.700	ENSMPUG00000010821	VARS	81	64.757	Mustela_putorius_furo
ENSTRUG00000012307	vars	92	64.322	ENSMLUG00000013126	VARS	100	64.242	Myotis_lucifugus
ENSTRUG00000012307	vars	98	63.576	ENSNGAG00000012151	Vars	82	63.801	Nannospalax_galili
ENSTRUG00000012307	vars	98	81.197	ENSNBRG00000020520	vars	82	81.125	Neolamprologus_brichardi
ENSTRUG00000012307	vars	98	64.183	ENSNLEG00000006351	VARS	82	64.142	Nomascus_leucogenys
ENSTRUG00000012307	vars	98	62.201	ENSMEUG00000011378	VARS	82	62.536	Notamacropus_eugenii
ENSTRUG00000012307	vars	98	64.374	ENSOPRG00000003607	VARS	82	64.525	Ochotona_princeps
ENSTRUG00000012307	vars	96	64.078	ENSODEG00000017681	VARS	81	64.202	Octodon_degus
ENSTRUG00000012307	vars	98	82.105	ENSONIG00000013064	vars	82	82.037	Oreochromis_niloticus
ENSTRUG00000012307	vars	87	69.892	ENSOANG00000005400	VARS	93	69.892	Ornithorhynchus_anatinus
ENSTRUG00000012307	vars	98	63.436	ENSOCUG00000022463	VARS	82	63.016	Oryctolagus_cuniculus
ENSTRUG00000012307	vars	97	80.707	ENSORLG00000013063	vars	81	81.112	Oryzias_latipes
ENSTRUG00000012307	vars	97	81.364	ENSORLG00020003504	vars	81	81.581	Oryzias_latipes_hni
ENSTRUG00000012307	vars	97	81.731	ENSORLG00015009001	vars	81	81.757	Oryzias_latipes_hsok
ENSTRUG00000012307	vars	97	81.827	ENSOMEG00000015016	vars	81	81.853	Oryzias_melastigma
ENSTRUG00000012307	vars	98	63.870	ENSOGAG00000007515	VARS	82	63.732	Otolemur_garnettii
ENSTRUG00000012307	vars	56	62.814	ENSOARG00000004625	-	87	63.149	Ovis_aries
ENSTRUG00000012307	vars	98	64.183	ENSPPAG00000034012	VARS	82	64.142	Pan_paniscus
ENSTRUG00000012307	vars	96	65.087	ENSPPRG00000014855	VARS	81	65.049	Panthera_pardus
ENSTRUG00000012307	vars	88	68.264	ENSPTIG00000010462	VARS	82	67.511	Panthera_tigris_altaica
ENSTRUG00000012307	vars	98	64.183	ENSPTRG00000017985	VARS	82	64.142	Pan_troglodytes
ENSTRUG00000012307	vars	98	62.013	ENSPANG00000014565	VARS	82	62.322	Papio_anubis
ENSTRUG00000012307	vars	97	75.928	ENSPKIG00000016304	vars	82	76.168	Paramormyrops_kingsleyae
ENSTRUG00000012307	vars	97	79.922	ENSPMGG00000023909	vars	81	79.941	Periophthalmus_magnuspinnatus
ENSTRUG00000012307	vars	98	64.279	ENSPEMG00000006639	Vars	82	64.334	Peromyscus_maniculatus_bairdii
ENSTRUG00000012307	vars	98	63.897	ENSPCIG00000018553	VARS	82	64.334	Phascolarctos_cinereus
ENSTRUG00000012307	vars	97	82.222	ENSPFOG00000015690	vars	81	82.381	Poecilia_formosa
ENSTRUG00000012307	vars	97	82.126	ENSPLAG00000009590	vars	81	82.285	Poecilia_latipinna
ENSTRUG00000012307	vars	97	82.353	ENSPMEG00000004708	vars	81	82.381	Poecilia_mexicana
ENSTRUG00000012307	vars	98	79.374	ENSPREG00000013264	vars	81	79.334	Poecilia_reticulata
ENSTRUG00000012307	vars	95	64.272	ENSPPYG00000016460	VARS	81	64.229	Pongo_abelii
ENSTRUG00000012307	vars	81	73.952	ENSPCAG00000013565	VARS	68	73.952	Procavia_capensis
ENSTRUG00000012307	vars	98	64.122	ENSPCOG00000010942	VARS	82	64.080	Propithecus_coquereli
ENSTRUG00000012307	vars	98	61.159	ENSPVAG00000012403	VARS	82	61.457	Pteropus_vampyrus
ENSTRUG00000012307	vars	98	81.387	ENSPNYG00000022511	vars	82	81.506	Pundamilia_nyererei
ENSTRUG00000012307	vars	98	76.945	ENSPNAG00000020962	vars	82	77.238	Pygocentrus_nattereri
ENSTRUG00000012307	vars	98	64.088	ENSRNOG00000000867	Vars	82	64.142	Rattus_norvegicus
ENSTRUG00000012307	vars	98	64.279	ENSRBIG00000041669	VARS	82	64.334	Rhinopithecus_bieti
ENSTRUG00000012307	vars	98	64.279	ENSRROG00000045490	VARS	82	64.334	Rhinopithecus_roxellana
ENSTRUG00000012307	vars	97	64.279	ENSSBOG00000035402	VARS	82	64.238	Saimiri_boliviensis_boliviensis
ENSTRUG00000012307	vars	98	61.847	ENSSHAG00000006937	VARS	82	62.879	Sarcophilus_harrisii
ENSTRUG00000012307	vars	97	75.312	ENSSFOG00015014272	vars	81	75.506	Scleropages_formosus
ENSTRUG00000012307	vars	98	80.703	ENSSMAG00000009596	vars	82	80.857	Scophthalmus_maximus
ENSTRUG00000012307	vars	98	82.163	ENSSDUG00000014177	vars	82	82.286	Seriola_dumerili
ENSTRUG00000012307	vars	98	81.784	ENSSLDG00000025316	vars	82	82.000	Seriola_lalandi_dorsalis
ENSTRUG00000012307	vars	96	84.570	ENSSPAG00000017068	vars	81	84.608	Stegastes_partitus
ENSTRUG00000012307	vars	98	63.931	ENSSSCG00000038950	VARS	82	63.985	Sus_scrofa
ENSTRUG00000012307	vars	97	86.523	ENSTNIG00000008011	vars	81	86.693	Tetraodon_nigroviridis
ENSTRUG00000012307	vars	98	58.302	ENSTTRG00000014128	VARS	82	58.142	Tursiops_truncatus
ENSTRUG00000012307	vars	96	65.058	ENSUAMG00000010424	VARS	82	65.146	Ursus_americanus
ENSTRUG00000012307	vars	96	62.451	ENSUMAG00000013486	VARS	83	62.720	Ursus_maritimus
ENSTRUG00000012307	vars	96	65.200	ENSVVUG00000021323	VARS	81	65.162	Vulpes_vulpes
ENSTRUG00000012307	vars	98	60.340	ENSXETG00000024076	vars	82	60.626	Xenopus_tropicalis
ENSTRUG00000012307	vars	98	80.271	ENSXCOG00000019172	vars	82	80.426	Xiphophorus_couchianus
ENSTRUG00000012307	vars	98	81.011	ENSXMAG00000010927	vars	82	81.166	Xiphophorus_maculatus