EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000012484 (Gene tree)
Gene ID: 101078903
Gene Symbol: exosc10
Alias: zgc:55695
Full Name: exosome component 10
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 9798 bases
Position: chr3:5224312-5234109
Accession: 101078903
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000031621	HRDC	PF00570.23	3.7e-10	1	1
ENSTRUP00000031620	HRDC	PF00570.23	3.7e-10	1	1
ENSTRUP00000031618	HRDC	PF00570.23	3.8e-10	1	1
ENSTRUP00000031620	PMC2NT	PF08066.12	1.2e-23	1	1
ENSTRUP00000031621	PMC2NT	PF08066.12	1.2e-23	1	1
ENSTRUP00000031618	PMC2NT	PF08066.12	1.2e-23	1	1
ENSTRUP00000031620	DNA_pol_A_exo1	PF01612.20	1.3e-46	1	1
ENSTRUP00000031618	DNA_pol_A_exo1	PF01612.20	1.4e-46	1	1
ENSTRUP00000031621	DNA_pol_A_exo1	PF01612.20	1.4e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000031743	-	5169	XM_003963237	ENSTRUP00000031620	919 (aa)	XP_003963286	H2U3V9
ENSTRUT00000031741	-	5319	-	ENSTRUP00000031618	933 (aa)	-	H2U3V7
ENSTRUT00000031744	-	5238	-	ENSTRUP00000031621	906 (aa)	-	H2U3W0

Gene Model

Click here to download ENSTRUG00000012484's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000012484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000012484	exosc10	97	58.875	ENSG00000171824	EXOSC10	98	58.875	Homo_sapiens
ENSTRUG00000012484	exosc10	99	78.884	ENSAPOG00000013304	exosc10	99	78.884	Acanthochromis_polyacanthus
ENSTRUG00000012484	exosc10	97	59.161	ENSAMEG00000009546	EXOSC10	98	59.161	Ailuropoda_melanoleuca
ENSTRUG00000012484	exosc10	94	73.949	ENSACIG00000020455	exosc10	98	74.182	Amphilophus_citrinellus
ENSTRUG00000012484	exosc10	99	71.556	ENSAOCG00000018823	exosc10	99	71.429	Amphiprion_ocellaris
ENSTRUG00000012484	exosc10	100	77.694	ENSAPEG00000017786	exosc10	100	77.694	Amphiprion_percula
ENSTRUG00000012484	exosc10	99	79.344	ENSATEG00000017271	exosc10	99	79.490	Anabas_testudineus
ENSTRUG00000012484	exosc10	95	60.592	ENSAPLG00000006652	EXOSC10	98	60.067	Anas_platyrhynchos
ENSTRUG00000012484	exosc10	95	55.856	ENSANAG00000031112	EXOSC10	99	55.906	Aotus_nancymaae
ENSTRUG00000012484	exosc10	98	78.812	ENSACLG00000025226	exosc10	99	78.035	Astatotilapia_calliptera
ENSTRUG00000012484	exosc10	99	65.615	ENSAMXG00000014510	exosc10	99	65.451	Astyanax_mexicanus
ENSTRUG00000012484	exosc10	74	66.863	ENSBTAG00000002590	EXOSC10	96	66.863	Bos_taurus
ENSTRUG00000012484	exosc10	69	37.112	WBGene00000796	crn-3	96	31.397	Caenorhabditis_elegans
ENSTRUG00000012484	exosc10	97	59.231	ENSCJAG00000002327	EXOSC10	98	59.231	Callithrix_jacchus
ENSTRUG00000012484	exosc10	98	59.170	ENSCAFG00000016721	EXOSC10	96	59.170	Canis_familiaris
ENSTRUG00000012484	exosc10	98	59.170	ENSCAFG00020002481	EXOSC10	96	59.170	Canis_lupus_dingo
ENSTRUG00000012484	exosc10	98	56.066	ENSCHIG00000020022	EXOSC10	99	56.066	Capra_hircus
ENSTRUG00000012484	exosc10	98	54.902	ENSTSYG00000006937	EXOSC10	99	54.902	Carlito_syrichta
ENSTRUG00000012484	exosc10	96	57.812	ENSCAPG00000006494	EXOSC10	99	58.371	Cavia_aperea
ENSTRUG00000012484	exosc10	97	57.993	ENSCPOG00000011628	EXOSC10	98	57.127	Cavia_porcellus
ENSTRUG00000012484	exosc10	97	55.556	ENSCCAG00000023223	EXOSC10	100	58.126	Cebus_capucinus
ENSTRUG00000012484	exosc10	98	58.624	ENSCATG00000039000	EXOSC10	90	69.884	Cercocebus_atys
ENSTRUG00000012484	exosc10	99	56.771	ENSCLAG00000005283	EXOSC10	99	57.313	Chinchilla_lanigera
ENSTRUG00000012484	exosc10	98	58.624	ENSCSAG00000000788	EXOSC10	99	58.734	Chlorocebus_sabaeus
ENSTRUG00000012484	exosc10	83	63.089	ENSCHOG00000012713	EXOSC10	86	63.613	Choloepus_hoffmanni
ENSTRUG00000012484	exosc10	99	58.804	ENSCPBG00000022004	EXOSC10	97	61.272	Chrysemys_picta_bellii
ENSTRUG00000012484	exosc10	64	48.311	ENSCSAVG00000009049	-	100	48.311	Ciona_savignyi
ENSTRUG00000012484	exosc10	97	58.674	ENSCANG00000042813	EXOSC10	98	58.720	Colobus_angolensis_palliatus
ENSTRUG00000012484	exosc10	98	58.935	ENSCGRG00001018469	Exosc10	98	58.798	Cricetulus_griseus_chok1gshd
ENSTRUG00000012484	exosc10	98	58.713	ENSCGRG00000002278	Exosc10	98	58.579	Cricetulus_griseus_crigri
ENSTRUG00000012484	exosc10	100	75.519	ENSCSEG00000005346	exosc10	100	75.431	Cynoglossus_semilaevis
ENSTRUG00000012484	exosc10	97	76.319	ENSCVAG00000016429	exosc10	99	75.356	Cyprinodon_variegatus
ENSTRUG00000012484	exosc10	97	66.044	ENSDARG00000037708	exosc10	100	65.032	Danio_rerio
ENSTRUG00000012484	exosc10	97	58.434	ENSDNOG00000011301	EXOSC10	99	58.434	Dasypus_novemcinctus
ENSTRUG00000012484	exosc10	98	55.886	ENSDORG00000003769	Exosc10	98	55.886	Dipodomys_ordii
ENSTRUG00000012484	exosc10	75	38.364	FBgn0038269	Rrp6	74	38.364	Drosophila_melanogaster
ENSTRUG00000012484	exosc10	92	58.953	ENSETEG00000000830	EXOSC10	97	60.646	Echinops_telfairi
ENSTRUG00000012484	exosc10	66	37.217	ENSEBUG00000004395	exosc10	99	35.776	Eptatretus_burgeri
ENSTRUG00000012484	exosc10	97	58.837	ENSEASG00005018716	EXOSC10	98	58.837	Equus_asinus_asinus
ENSTRUG00000012484	exosc10	97	59.492	ENSECAG00000011639	EXOSC10	98	59.492	Equus_caballus
ENSTRUG00000012484	exosc10	68	62.141	ENSEEUG00000001166	EXOSC10	72	62.141	Erinaceus_europaeus
ENSTRUG00000012484	exosc10	97	70.034	ENSELUG00000012870	exosc10	99	68.913	Esox_lucius
ENSTRUG00000012484	exosc10	97	59.000	ENSFCAG00000000052	EXOSC10	98	58.850	Felis_catus
ENSTRUG00000012484	exosc10	96	59.239	ENSFALG00000010287	EXOSC10	96	58.856	Ficedula_albicollis
ENSTRUG00000012484	exosc10	98	58.579	ENSFDAG00000002942	EXOSC10	99	58.579	Fukomys_damarensis
ENSTRUG00000012484	exosc10	99	75.531	ENSFHEG00000010678	exosc10	99	75.220	Fundulus_heteroclitus
ENSTRUG00000012484	exosc10	84	74.212	ENSGMOG00000006131	exosc10	90	74.212	Gadus_morhua
ENSTRUG00000012484	exosc10	97	59.956	ENSGALG00000003086	EXOSC10	95	59.647	Gallus_gallus
ENSTRUG00000012484	exosc10	99	75.444	ENSGAFG00000019222	exosc10	99	75.444	Gambusia_affinis
ENSTRUG00000012484	exosc10	99	72.162	ENSGACG00000007037	exosc10	99	73.090	Gasterosteus_aculeatus
ENSTRUG00000012484	exosc10	97	60.089	ENSGAGG00000000251	EXOSC10	100	59.527	Gopherus_agassizii
ENSTRUG00000012484	exosc10	97	59.096	ENSGGOG00000010572	EXOSC10	98	59.096	Gorilla_gorilla
ENSTRUG00000012484	exosc10	94	80.134	ENSHBUG00000020328	exosc10	100	79.183	Haplochromis_burtoni
ENSTRUG00000012484	exosc10	97	58.324	ENSHGLG00000011944	EXOSC10	98	58.875	Heterocephalus_glaber_female
ENSTRUG00000012484	exosc10	97	58.324	ENSHGLG00100014444	EXOSC10	98	58.875	Heterocephalus_glaber_male
ENSTRUG00000012484	exosc10	99	72.331	ENSHCOG00000016164	exosc10	100	72.579	Hippocampus_comes
ENSTRUG00000012484	exosc10	99	65.231	ENSIPUG00000021971	exosc10	99	65.231	Ictalurus_punctatus
ENSTRUG00000012484	exosc10	98	58.927	ENSSTOG00000005459	EXOSC10	98	58.927	Ictidomys_tridecemlineatus
ENSTRUG00000012484	exosc10	99	57.696	ENSJJAG00000013716	Exosc10	99	57.696	Jaculus_jaculus
ENSTRUG00000012484	exosc10	99	76.863	ENSKMAG00000015540	exosc10	99	76.316	Kryptolebias_marmoratus
ENSTRUG00000012484	exosc10	99	78.399	ENSLBEG00000022229	exosc10	99	78.399	Labrus_bergylta
ENSTRUG00000012484	exosc10	98	61.229	ENSLACG00000016691	EXOSC10	98	61.258	Latimeria_chalumnae
ENSTRUG00000012484	exosc10	97	66.704	ENSLOCG00000006443	exosc10	97	66.704	Lepisosteus_oculatus
ENSTRUG00000012484	exosc10	97	58.389	ENSLAFG00000016894	EXOSC10	98	58.830	Loxodonta_africana
ENSTRUG00000012484	exosc10	98	58.624	ENSMFAG00000038874	EXOSC10	99	57.797	Macaca_fascicularis
ENSTRUG00000012484	exosc10	98	58.843	ENSMMUG00000019322	EXOSC10	99	58.651	Macaca_mulatta
ENSTRUG00000012484	exosc10	98	58.624	ENSMNEG00000035812	EXOSC10	99	58.433	Macaca_nemestrina
ENSTRUG00000012484	exosc10	98	58.624	ENSMLEG00000025160	EXOSC10	99	58.624	Mandrillus_leucophaeus
ENSTRUG00000012484	exosc10	99	77.358	ENSMAMG00000019375	exosc10	99	77.913	Mastacembelus_armatus
ENSTRUG00000012484	exosc10	98	78.812	ENSMZEG00005013730	exosc10	99	78.035	Maylandia_zebra
ENSTRUG00000012484	exosc10	96	59.106	ENSMGAG00000004665	EXOSC10	99	59.297	Meleagris_gallopavo
ENSTRUG00000012484	exosc10	64	70.619	ENSMAUG00000019261	Exosc10	94	70.619	Mesocricetus_auratus
ENSTRUG00000012484	exosc10	97	59.337	ENSMICG00000003858	EXOSC10	98	59.031	Microcebus_murinus
ENSTRUG00000012484	exosc10	65	69.831	ENSMOCG00000016509	Exosc10	95	69.831	Microtus_ochrogaster
ENSTRUG00000012484	exosc10	99	74.751	ENSMMOG00000009265	exosc10	99	74.751	Mola_mola
ENSTRUG00000012484	exosc10	97	58.556	ENSMODG00000011194	EXOSC10	97	59.000	Monodelphis_domestica
ENSTRUG00000012484	exosc10	99	77.596	ENSMALG00000021322	exosc10	99	77.596	Monopterus_albus
ENSTRUG00000012484	exosc10	97	58.288	MGP_CAROLIEiJ_G0026802	Exosc10	94	69.759	Mus_caroli
ENSTRUG00000012484	exosc10	97	57.773	ENSMUSG00000017264	Exosc10	92	70.599	Mus_musculus
ENSTRUG00000012484	exosc10	97	58.033	MGP_PahariEiJ_G0029150	Exosc10	94	70.103	Mus_pahari
ENSTRUG00000012484	exosc10	97	57.883	MGP_SPRETEiJ_G0027795	Exosc10	94	69.588	Mus_spretus
ENSTRUG00000012484	exosc10	98	58.980	ENSMPUG00000016434	EXOSC10	96	58.798	Mustela_putorius_furo
ENSTRUG00000012484	exosc10	97	58.856	ENSMLUG00000004276	EXOSC10	97	59.358	Myotis_lucifugus
ENSTRUG00000012484	exosc10	97	58.499	ENSNGAG00000023829	Exosc10	98	58.499	Nannospalax_galili
ENSTRUG00000012484	exosc10	98	73.673	ENSNBRG00000006256	exosc10	99	73.246	Neolamprologus_brichardi
ENSTRUG00000012484	exosc10	96	58.417	ENSNLEG00000009539	EXOSC10	98	57.159	Nomascus_leucogenys
ENSTRUG00000012484	exosc10	59	91.892	ENSMEUG00000007020	-	65	91.892	Notamacropus_eugenii
ENSTRUG00000012484	exosc10	97	59.227	ENSOPRG00000012091	EXOSC10	98	59.227	Ochotona_princeps
ENSTRUG00000012484	exosc10	97	58.029	ENSODEG00000013285	EXOSC10	97	58.472	Octodon_degus
ENSTRUG00000012484	exosc10	84	83.007	ENSONIG00000002322	exosc10	99	82.051	Oreochromis_niloticus
ENSTRUG00000012484	exosc10	97	56.092	ENSOANG00000013322	EXOSC10	97	56.531	Ornithorhynchus_anatinus
ENSTRUG00000012484	exosc10	97	58.804	ENSOCUG00000013039	EXOSC10	98	58.804	Oryctolagus_cuniculus
ENSTRUG00000012484	exosc10	99	76.438	ENSORLG00000005117	exosc10	100	77.016	Oryzias_latipes
ENSTRUG00000012484	exosc10	99	76.685	ENSORLG00020013529	exosc10	99	77.266	Oryzias_latipes_hni
ENSTRUG00000012484	exosc10	99	76.464	ENSORLG00015005525	exosc10	99	76.464	Oryzias_latipes_hsok
ENSTRUG00000012484	exosc10	98	75.982	ENSOMEG00000003337	exosc10	98	75.774	Oryzias_melastigma
ENSTRUG00000012484	exosc10	98	53.863	ENSOGAG00000013662	EXOSC10	99	53.863	Otolemur_garnettii
ENSTRUG00000012484	exosc10	97	58.571	ENSOARG00000003668	EXOSC10	98	58.571	Ovis_aries
ENSTRUG00000012484	exosc10	97	58.765	ENSPPAG00000038356	EXOSC10	98	58.986	Pan_paniscus
ENSTRUG00000012484	exosc10	97	59.193	ENSPPRG00000022976	EXOSC10	98	59.116	Panthera_pardus
ENSTRUG00000012484	exosc10	91	60.885	ENSPTIG00000012735	EXOSC10	96	60.885	Panthera_tigris_altaica
ENSTRUG00000012484	exosc10	97	56.354	ENSPTRG00000000140	EXOSC10	98	56.354	Pan_troglodytes
ENSTRUG00000012484	exosc10	98	57.705	ENSPANG00000026088	EXOSC10	99	57.751	Papio_anubis
ENSTRUG00000012484	exosc10	97	65.295	ENSPKIG00000013098	exosc10	96	65.295	Paramormyrops_kingsleyae
ENSTRUG00000012484	exosc10	99	58.316	ENSPSIG00000005078	EXOSC10	99	58.595	Pelodiscus_sinensis
ENSTRUG00000012484	exosc10	63	82.927	ENSPMGG00000022241	exosc10	98	82.504	Periophthalmus_magnuspinnatus
ENSTRUG00000012484	exosc10	76	66.286	ENSPEMG00000007753	Exosc10	97	66.381	Peromyscus_maniculatus_bairdii
ENSTRUG00000012484	exosc10	54	51.822	ENSPMAG00000006909	exosc10	100	51.822	Petromyzon_marinus
ENSTRUG00000012484	exosc10	96	53.483	ENSPCIG00000004840	EXOSC10	99	63.777	Phascolarctos_cinereus
ENSTRUG00000012484	exosc10	99	75.333	ENSPFOG00000004744	exosc10	99	75.246	Poecilia_formosa
ENSTRUG00000012484	exosc10	99	75.000	ENSPLAG00000010253	exosc10	99	74.918	Poecilia_latipinna
ENSTRUG00000012484	exosc10	99	75.111	ENSPMEG00000005740	exosc10	99	75.027	Poecilia_mexicana
ENSTRUG00000012484	exosc10	99	75.222	ENSPREG00000016285	exosc10	99	75.137	Poecilia_reticulata
ENSTRUG00000012484	exosc10	98	58.425	ENSPPYG00000001891	EXOSC10	96	58.425	Pongo_abelii
ENSTRUG00000012484	exosc10	68	62.720	ENSPCAG00000001583	EXOSC10	93	62.720	Procavia_capensis
ENSTRUG00000012484	exosc10	97	59.292	ENSPCOG00000013742	EXOSC10	98	59.292	Propithecus_coquereli
ENSTRUG00000012484	exosc10	97	59.358	ENSPVAG00000014780	EXOSC10	98	59.358	Pteropus_vampyrus
ENSTRUG00000012484	exosc10	98	78.700	ENSPNYG00000007387	exosc10	99	77.925	Pundamilia_nyererei
ENSTRUG00000012484	exosc10	98	64.885	ENSPNAG00000028864	exosc10	100	64.868	Pygocentrus_nattereri
ENSTRUG00000012484	exosc10	98	57.563	ENSRNOG00000010719	Exosc10	98	58.379	Rattus_norvegicus
ENSTRUG00000012484	exosc10	97	51.978	ENSRBIG00000039772	EXOSC10	98	51.978	Rhinopithecus_bieti
ENSTRUG00000012484	exosc10	97	59.006	ENSRROG00000036700	EXOSC10	98	59.006	Rhinopithecus_roxellana
ENSTRUG00000012484	exosc10	59	35.273	YOR001W	-	68	35.273	Saccharomyces_cerevisiae
ENSTRUG00000012484	exosc10	97	54.204	ENSSBOG00000020768	EXOSC10	99	54.372	Saimiri_boliviensis_boliviensis
ENSTRUG00000012484	exosc10	95	57.517	ENSSHAG00000013572	EXOSC10	100	57.770	Sarcophilus_harrisii
ENSTRUG00000012484	exosc10	94	65.935	ENSSFOG00015004512	exosc10	99	66.051	Scleropages_formosus
ENSTRUG00000012484	exosc10	97	78.309	ENSSMAG00000017318	exosc10	99	77.741	Scophthalmus_maximus
ENSTRUG00000012484	exosc10	99	79.759	ENSSDUG00000006646	exosc10	99	79.759	Seriola_dumerili
ENSTRUG00000012484	exosc10	99	79.212	ENSSLDG00000025554	exosc10	99	79.212	Seriola_lalandi_dorsalis
ENSTRUG00000012484	exosc10	81	50.336	ENSSARG00000013171	EXOSC10	100	50.336	Sorex_araneus
ENSTRUG00000012484	exosc10	95	59.475	ENSSPUG00000006844	EXOSC10	95	71.454	Sphenodon_punctatus
ENSTRUG00000012484	exosc10	99	79.212	ENSSPAG00000007053	exosc10	99	79.212	Stegastes_partitus
ENSTRUG00000012484	exosc10	90	58.768	ENSSSCG00000003412	EXOSC10	100	58.768	Sus_scrofa
ENSTRUG00000012484	exosc10	96	57.805	ENSTGUG00000002231	EXOSC10	99	57.805	Taeniopygia_guttata
ENSTRUG00000012484	exosc10	97	89.773	ENSTNIG00000015181	exosc10	100	89.586	Tetraodon_nigroviridis
ENSTRUG00000012484	exosc10	71	75.455	ENSTBEG00000017471	-	70	75.455	Tupaia_belangeri
ENSTRUG00000012484	exosc10	99	58.072	ENSTTRG00000001320	EXOSC10	99	58.072	Tursiops_truncatus
ENSTRUG00000012484	exosc10	93	59.310	ENSUAMG00000014404	EXOSC10	96	60.854	Ursus_americanus
ENSTRUG00000012484	exosc10	97	57.807	ENSUMAG00000023413	EXOSC10	99	64.892	Ursus_maritimus
ENSTRUG00000012484	exosc10	60	72.527	ENSVPAG00000004629	EXOSC10	62	72.527	Vicugna_pacos
ENSTRUG00000012484	exosc10	90	58.057	ENSVVUG00000027116	EXOSC10	100	58.057	Vulpes_vulpes
ENSTRUG00000012484	exosc10	96	54.535	ENSXETG00000006318	exosc10	99	54.494	Xenopus_tropicalis
ENSTRUG00000012484	exosc10	98	75.167	ENSXCOG00000004665	exosc10	99	78.121	Xiphophorus_couchianus
ENSTRUG00000012484	exosc10	98	75.278	ENSXMAG00000011246	exosc10	99	75.082	Xiphophorus_maculatus