EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000012602 (Gene tree)
Gene ID: 101064782
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 2464 bases
Position: chr14:3081423-3083886
Accession: 101064782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000031904	Clp1	PF06807.14	1.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000032027	-	1841	XM_003970331	ENSTRUP00000031904	436 (aa)	XP_003970380	H2U4P2

Gene Model

Click here to download ENSTRUG00000012602's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000012602's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000012602	clp1	98	77.049	ENSG00000172409	CLP1	99	77.049	Homo_sapiens
ENSTRUG00000012602	clp1	100	91.610	ENSAPOG00000008242	clp1	100	91.610	Acanthochromis_polyacanthus
ENSTRUG00000012602	clp1	98	76.581	ENSAMEG00000014551	CLP1	98	76.581	Ailuropoda_melanoleuca
ENSTRUG00000012602	clp1	100	91.610	ENSACIG00000006310	clp1	99	91.610	Amphilophus_citrinellus
ENSTRUG00000012602	clp1	100	92.063	ENSAOCG00000010681	clp1	100	92.063	Amphiprion_ocellaris
ENSTRUG00000012602	clp1	100	92.063	ENSAPEG00000012165	clp1	100	92.063	Amphiprion_percula
ENSTRUG00000012602	clp1	100	91.837	ENSATEG00000012374	clp1	100	91.837	Anabas_testudineus
ENSTRUG00000012602	clp1	98	76.402	ENSACAG00000007139	CLP1	99	76.402	Anolis_carolinensis
ENSTRUG00000012602	clp1	98	77.049	ENSANAG00000034935	CLP1	99	77.049	Aotus_nancymaae
ENSTRUG00000012602	clp1	100	92.290	ENSACLG00000013573	clp1	100	92.290	Astatotilapia_calliptera
ENSTRUG00000012602	clp1	95	87.264	ENSAMXG00000014194	clp1	98	87.264	Astyanax_mexicanus
ENSTRUG00000012602	clp1	98	76.581	ENSBTAG00000006493	CLP1	99	76.581	Bos_taurus
ENSTRUG00000012602	clp1	94	47.242	WBGene00010304	clpf-1	96	47.242	Caenorhabditis_elegans
ENSTRUG00000012602	clp1	98	77.049	ENSCJAG00000008748	CLP1	99	77.049	Callithrix_jacchus
ENSTRUG00000012602	clp1	98	76.581	ENSCAFG00000007815	CLP1	99	76.581	Canis_familiaris
ENSTRUG00000012602	clp1	98	76.581	ENSCAFG00020000903	CLP1	99	76.581	Canis_lupus_dingo
ENSTRUG00000012602	clp1	98	76.347	ENSCHIG00000023497	CLP1	99	76.347	Capra_hircus
ENSTRUG00000012602	clp1	98	76.815	ENSTSYG00000006824	CLP1	98	76.815	Carlito_syrichta
ENSTRUG00000012602	clp1	96	77.619	ENSCAPG00000009703	CLP1	98	77.619	Cavia_aperea
ENSTRUG00000012602	clp1	96	77.619	ENSCPOG00000012554	CLP1	99	77.619	Cavia_porcellus
ENSTRUG00000012602	clp1	96	77.619	ENSCCAG00000031957	CLP1	98	77.619	Cebus_capucinus
ENSTRUG00000012602	clp1	98	77.049	ENSCATG00000044628	CLP1	99	77.049	Cercocebus_atys
ENSTRUG00000012602	clp1	98	76.815	ENSCLAG00000004094	CLP1	99	76.815	Chinchilla_lanigera
ENSTRUG00000012602	clp1	98	77.049	ENSCSAG00000005994	CLP1	99	77.049	Chlorocebus_sabaeus
ENSTRUG00000012602	clp1	98	76.636	ENSCPBG00000016843	CLP1	99	76.636	Chrysemys_picta_bellii
ENSTRUG00000012602	clp1	96	62.201	ENSCING00000003779	-	96	62.201	Ciona_intestinalis
ENSTRUG00000012602	clp1	95	62.802	ENSCSAVG00000003437	-	96	62.802	Ciona_savignyi
ENSTRUG00000012602	clp1	98	77.049	ENSCANG00000034335	CLP1	99	77.049	Colobus_angolensis_palliatus
ENSTRUG00000012602	clp1	98	76.168	ENSCGRG00001002227	CLP1	99	76.168	Cricetulus_griseus_chok1gshd
ENSTRUG00000012602	clp1	98	76.168	ENSCGRG00000004328	CLP1	99	76.168	Cricetulus_griseus_crigri
ENSTRUG00000012602	clp1	100	88.435	ENSCSEG00000008614	clp1	100	88.435	Cynoglossus_semilaevis
ENSTRUG00000012602	clp1	100	90.023	ENSCVAG00000020101	clp1	100	90.023	Cyprinodon_variegatus
ENSTRUG00000012602	clp1	95	85.782	ENSDARG00000063663	clp1	96	84.813	Danio_rerio
ENSTRUG00000012602	clp1	98	76.512	ENSDNOG00000042415	CLP1	90	76.512	Dasypus_novemcinctus
ENSTRUG00000012602	clp1	98	76.347	ENSDORG00000014685	Clp1	99	76.347	Dipodomys_ordii
ENSTRUG00000012602	clp1	94	55.314	FBgn0033842	cbc	97	55.314	Drosophila_melanogaster
ENSTRUG00000012602	clp1	98	76.815	ENSETEG00000003009	CLP1	99	76.815	Echinops_telfairi
ENSTRUG00000012602	clp1	97	65.574	ENSEBUG00000011648	clp1	99	65.574	Eptatretus_burgeri
ENSTRUG00000012602	clp1	98	77.049	ENSEASG00005002093	CLP1	99	77.049	Equus_asinus_asinus
ENSTRUG00000012602	clp1	98	77.049	ENSECAG00000011597	CLP1	99	77.049	Equus_caballus
ENSTRUG00000012602	clp1	99	75.520	ENSEEUG00000012771	CLP1	99	75.520	Erinaceus_europaeus
ENSTRUG00000012602	clp1	95	88.443	ENSELUG00000024048	clp1	100	85.650	Esox_lucius
ENSTRUG00000012602	clp1	98	76.581	ENSFCAG00000006633	CLP1	99	76.581	Felis_catus
ENSTRUG00000012602	clp1	98	76.402	ENSFALG00000011145	CLP1	99	76.402	Ficedula_albicollis
ENSTRUG00000012602	clp1	98	76.815	ENSFDAG00000000234	CLP1	99	76.815	Fukomys_damarensis
ENSTRUG00000012602	clp1	100	90.703	ENSFHEG00000014760	CLP1	100	90.703	Fundulus_heteroclitus
ENSTRUG00000012602	clp1	100	87.528	ENSGMOG00000019340	clp1	100	87.528	Gadus_morhua
ENSTRUG00000012602	clp1	98	76.636	ENSGALG00000007370	CLP1	99	76.636	Gallus_gallus
ENSTRUG00000012602	clp1	100	90.023	ENSGAFG00000003020	clp1	100	90.345	Gambusia_affinis
ENSTRUG00000012602	clp1	100	91.383	ENSGACG00000017832	clp1	100	91.383	Gasterosteus_aculeatus
ENSTRUG00000012602	clp1	98	76.636	ENSGAGG00000013279	CLP1	99	76.636	Gopherus_agassizii
ENSTRUG00000012602	clp1	98	77.049	ENSGGOG00000023006	CLP1	99	77.049	Gorilla_gorilla
ENSTRUG00000012602	clp1	100	92.517	ENSHBUG00000010436	clp1	100	92.517	Haplochromis_burtoni
ENSTRUG00000012602	clp1	98	76.815	ENSHGLG00000009914	CLP1	99	76.815	Heterocephalus_glaber_female
ENSTRUG00000012602	clp1	98	76.815	ENSHGLG00100006105	CLP1	99	76.815	Heterocephalus_glaber_male
ENSTRUG00000012602	clp1	100	91.837	ENSHCOG00000010072	clp1	100	91.837	Hippocampus_comes
ENSTRUG00000012602	clp1	95	86.052	ENSIPUG00000016238	clp1	99	82.183	Ictalurus_punctatus
ENSTRUG00000012602	clp1	98	76.815	ENSSTOG00000029257	CLP1	99	76.815	Ictidomys_tridecemlineatus
ENSTRUG00000012602	clp1	98	76.347	ENSJJAG00000023691	Clp1	99	76.347	Jaculus_jaculus
ENSTRUG00000012602	clp1	100	90.930	ENSKMAG00000011990	clp1	100	90.930	Kryptolebias_marmoratus
ENSTRUG00000012602	clp1	100	92.063	ENSLBEG00000010201	clp1	100	92.063	Labrus_bergylta
ENSTRUG00000012602	clp1	96	76.190	ENSLACG00000003160	CLP1	98	76.190	Latimeria_chalumnae
ENSTRUG00000012602	clp1	71	86.335	ENSLOCG00000008074	clp1	100	86.646	Lepisosteus_oculatus
ENSTRUG00000012602	clp1	98	76.581	ENSLAFG00000014907	CLP1	99	76.581	Loxodonta_africana
ENSTRUG00000012602	clp1	98	77.049	ENSMFAG00000046074	CLP1	99	77.049	Macaca_fascicularis
ENSTRUG00000012602	clp1	98	77.049	ENSMMUG00000038007	CLP1	98	77.049	Macaca_mulatta
ENSTRUG00000012602	clp1	98	77.049	ENSMNEG00000000259	CLP1	99	77.049	Macaca_nemestrina
ENSTRUG00000012602	clp1	98	77.049	ENSMLEG00000043556	CLP1	99	77.049	Mandrillus_leucophaeus
ENSTRUG00000012602	clp1	100	92.063	ENSMAMG00000002149	clp1	100	92.063	Mastacembelus_armatus
ENSTRUG00000012602	clp1	100	92.290	ENSMZEG00005002850	clp1	100	92.290	Maylandia_zebra
ENSTRUG00000012602	clp1	98	76.636	ENSMGAG00000009643	CLP1	99	76.636	Meleagris_gallopavo
ENSTRUG00000012602	clp1	98	76.168	ENSMAUG00000016261	Clp1	99	76.168	Mesocricetus_auratus
ENSTRUG00000012602	clp1	98	76.581	ENSMICG00000004895	CLP1	99	76.581	Microcebus_murinus
ENSTRUG00000012602	clp1	98	76.402	ENSMOCG00000005498	Clp1	99	76.402	Microtus_ochrogaster
ENSTRUG00000012602	clp1	100	92.971	ENSMMOG00000003229	clp1	100	92.971	Mola_mola
ENSTRUG00000012602	clp1	98	76.402	ENSMODG00000020107	-	99	76.402	Monodelphis_domestica
ENSTRUG00000012602	clp1	98	76.402	ENSMODG00000024148	-	99	76.402	Monodelphis_domestica
ENSTRUG00000012602	clp1	100	91.383	ENSMALG00000014239	clp1	100	91.383	Monopterus_albus
ENSTRUG00000012602	clp1	98	76.168	MGP_CAROLIEiJ_G0023726	Clp1	99	76.168	Mus_caroli
ENSTRUG00000012602	clp1	98	76.168	ENSMUSG00000027079	Clp1	99	76.168	Mus_musculus
ENSTRUG00000012602	clp1	98	75.935	MGP_PahariEiJ_G0025177	Clp1	99	75.935	Mus_pahari
ENSTRUG00000012602	clp1	98	76.168	MGP_SPRETEiJ_G0024646	Clp1	99	76.168	Mus_spretus
ENSTRUG00000012602	clp1	98	76.581	ENSMPUG00000000268	CLP1	99	76.581	Mustela_putorius_furo
ENSTRUG00000012602	clp1	96	77.381	ENSMLUG00000007904	CLP1	98	77.381	Myotis_lucifugus
ENSTRUG00000012602	clp1	98	76.347	ENSNGAG00000006165	Clp1	99	76.347	Nannospalax_galili
ENSTRUG00000012602	clp1	100	91.837	ENSNBRG00000005225	clp1	100	91.837	Neolamprologus_brichardi
ENSTRUG00000012602	clp1	80	71.825	ENSNLEG00000012809	-	99	71.825	Nomascus_leucogenys
ENSTRUG00000012602	clp1	98	76.402	ENSMEUG00000010949	CLP1	99	76.402	Notamacropus_eugenii
ENSTRUG00000012602	clp1	68	78.930	ENSOPRG00000007329	CLP1	100	78.930	Ochotona_princeps
ENSTRUG00000012602	clp1	98	76.815	ENSODEG00000011410	CLP1	99	76.815	Octodon_degus
ENSTRUG00000012602	clp1	100	91.837	ENSONIG00000005089	clp1	100	91.837	Oreochromis_niloticus
ENSTRUG00000012602	clp1	96	77.619	ENSOCUG00000007045	CLP1	98	77.619	Oryctolagus_cuniculus
ENSTRUG00000012602	clp1	100	89.116	ENSORLG00000003647	clp1	100	89.116	Oryzias_latipes
ENSTRUG00000012602	clp1	100	88.889	ENSORLG00020016676	clp1	100	88.889	Oryzias_latipes_hni
ENSTRUG00000012602	clp1	100	89.116	ENSORLG00015019484	clp1	100	89.116	Oryzias_latipes_hsok
ENSTRUG00000012602	clp1	100	89.116	ENSOMEG00000021303	clp1	100	89.116	Oryzias_melastigma
ENSTRUG00000012602	clp1	98	76.581	ENSOGAG00000004508	CLP1	99	76.581	Otolemur_garnettii
ENSTRUG00000012602	clp1	98	75.410	ENSOARG00000010145	CLP1	98	75.410	Ovis_aries
ENSTRUG00000012602	clp1	98	77.049	ENSPPAG00000041519	CLP1	99	77.049	Pan_paniscus
ENSTRUG00000012602	clp1	98	76.581	ENSPPRG00000006135	CLP1	99	76.581	Panthera_pardus
ENSTRUG00000012602	clp1	98	76.581	ENSPTIG00000015866	CLP1	99	76.581	Panthera_tigris_altaica
ENSTRUG00000012602	clp1	98	77.049	ENSPTRG00000047318	CLP1	99	77.049	Pan_troglodytes
ENSTRUG00000012602	clp1	98	77.049	ENSPANG00000017078	CLP1	97	77.049	Papio_anubis
ENSTRUG00000012602	clp1	100	85.455	ENSPKIG00000007697	clp1	100	85.455	Paramormyrops_kingsleyae
ENSTRUG00000012602	clp1	93	73.827	ENSPSIG00000005468	CLP1	99	73.827	Pelodiscus_sinensis
ENSTRUG00000012602	clp1	100	90.249	ENSPMGG00000012171	clp1	100	90.249	Periophthalmus_magnuspinnatus
ENSTRUG00000012602	clp1	98	76.402	ENSPEMG00000011213	-	99	76.402	Peromyscus_maniculatus_bairdii
ENSTRUG00000012602	clp1	95	68.106	ENSPMAG00000006707	clp1	97	68.106	Petromyzon_marinus
ENSTRUG00000012602	clp1	98	76.636	ENSPCIG00000011899	CLP1	99	76.636	Phascolarctos_cinereus
ENSTRUG00000012602	clp1	100	90.476	ENSPFOG00000008169	clp1	100	90.476	Poecilia_formosa
ENSTRUG00000012602	clp1	100	90.476	ENSPLAG00000022388	clp1	100	90.476	Poecilia_latipinna
ENSTRUG00000012602	clp1	100	90.476	ENSPMEG00000021088	clp1	100	90.476	Poecilia_mexicana
ENSTRUG00000012602	clp1	100	90.476	ENSPREG00000017802	clp1	100	90.476	Poecilia_reticulata
ENSTRUG00000012602	clp1	51	76.444	ENSPPYG00000003266	-	100	76.444	Pongo_abelii
ENSTRUG00000012602	clp1	98	76.581	ENSPCOG00000000360	CLP1	98	76.581	Propithecus_coquereli
ENSTRUG00000012602	clp1	98	76.581	ENSPVAG00000016270	CLP1	99	76.581	Pteropus_vampyrus
ENSTRUG00000012602	clp1	100	92.517	ENSPNYG00000017274	clp1	99	92.517	Pundamilia_nyererei
ENSTRUG00000012602	clp1	95	86.525	ENSPNAG00000026460	clp1	100	83.036	Pygocentrus_nattereri
ENSTRUG00000012602	clp1	98	76.168	ENSRNOG00000007416	Clp1	99	76.168	Rattus_norvegicus
ENSTRUG00000012602	clp1	98	77.049	ENSRBIG00000018191	CLP1	99	77.049	Rhinopithecus_bieti
ENSTRUG00000012602	clp1	98	77.049	ENSRROG00000039265	CLP1	99	77.049	Rhinopithecus_roxellana
ENSTRUG00000012602	clp1	98	77.049	ENSSBOG00000032517	-	99	77.049	Saimiri_boliviensis_boliviensis
ENSTRUG00000012602	clp1	94	64.059	ENSSBOG00000010558	-	93	64.059	Saimiri_boliviensis_boliviensis
ENSTRUG00000012602	clp1	98	76.636	ENSSHAG00000015695	CLP1	99	76.636	Sarcophilus_harrisii
ENSTRUG00000012602	clp1	100	83.444	ENSSFOG00015000628	clp1	99	84.650	Scleropages_formosus
ENSTRUG00000012602	clp1	100	91.383	ENSSMAG00000019423	clp1	99	91.383	Scophthalmus_maximus
ENSTRUG00000012602	clp1	100	92.290	ENSSDUG00000014495	clp1	100	92.290	Seriola_dumerili
ENSTRUG00000012602	clp1	100	92.063	ENSSLDG00000000937	clp1	100	92.063	Seriola_lalandi_dorsalis
ENSTRUG00000012602	clp1	51	76.339	ENSSARG00000002459	CLP1	100	76.339	Sorex_araneus
ENSTRUG00000012602	clp1	98	76.402	ENSSPUG00000016811	CLP1	99	76.402	Sphenodon_punctatus
ENSTRUG00000012602	clp1	100	91.383	ENSSPAG00000016052	clp1	100	91.383	Stegastes_partitus
ENSTRUG00000012602	clp1	98	76.581	ENSSSCG00000031442	CLP1	99	76.581	Sus_scrofa
ENSTRUG00000012602	clp1	98	76.168	ENSTGUG00000007002	CLP1	99	76.168	Taeniopygia_guttata
ENSTRUG00000012602	clp1	100	97.936	ENSTNIG00000013125	clp1	100	97.936	Tetraodon_nigroviridis
ENSTRUG00000012602	clp1	99	75.289	ENSTBEG00000009975	CLP1	99	75.289	Tupaia_belangeri
ENSTRUG00000012602	clp1	98	76.347	ENSTTRG00000002096	CLP1	99	76.347	Tursiops_truncatus
ENSTRUG00000012602	clp1	98	76.581	ENSUAMG00000011388	CLP1	99	76.581	Ursus_americanus
ENSTRUG00000012602	clp1	98	76.581	ENSUMAG00000018317	CLP1	99	76.581	Ursus_maritimus
ENSTRUG00000012602	clp1	98	76.581	ENSVVUG00000017138	CLP1	96	76.581	Vulpes_vulpes
ENSTRUG00000012602	clp1	98	70.909	ENSXETG00000007088	clp1	99	71.364	Xenopus_tropicalis
ENSTRUG00000012602	clp1	100	90.249	ENSXCOG00000002287	clp1	100	90.249	Xiphophorus_couchianus
ENSTRUG00000012602	clp1	100	90.249	ENSXMAG00000009783	clp1	100	90.249	Xiphophorus_maculatus