EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000012719 (Gene tree)
Gene ID: 101080057
Gene Symbol: -
Alias: -
Full Name: transcriptional repressor scratch 1-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4762 bases
Position: chr12:9653286-9658047
Accession: 101080057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000032189	zf-C2H2	PF00096.26	1.7e-25	1	4
ENSTRUP00000032189	zf-C2H2	PF00096.26	1.7e-25	2	4
ENSTRUP00000032189	zf-C2H2	PF00096.26	1.7e-25	3	4
ENSTRUP00000032189	zf-C2H2	PF00096.26	1.7e-25	4	4
ENSTRUP00000032189	zf-met	PF12874.7	7.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000032313	-	897	XM_003969354	ENSTRUP00000032189	298 (aa)	XP_003969403	H2U5H3

Gene Model

Click here to download ENSTRUG00000012719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000012719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000012719	-	50	38.053	ENSTRUG00000020582	-	86	43.902
ENSTRUG00000012719	-	86	89.494	ENSTRUG00000019558	-	82	89.494
ENSTRUG00000012719	-	50	35.606	ENSTRUG00000024073	-	62	35.606
ENSTRUG00000012719	-	69	44.000	ENSTRUG00000017456	znf236	57	44.000
ENSTRUG00000012719	-	53	38.636	ENSTRUG00000021675	-	64	38.636
ENSTRUG00000012719	-	51	39.161	ENSTRUG00000019483	-	100	38.406
ENSTRUG00000012719	-	54	37.748	ENSTRUG00000003454	-	60	39.394
ENSTRUG00000012719	-	56	42.391	ENSTRUG00000015687	-	92	39.175
ENSTRUG00000012719	-	51	42.727	ENSTRUG00000006896	-	81	42.727
ENSTRUG00000012719	-	52	46.154	ENSTRUG00000012157	-	62	46.154
ENSTRUG00000012719	-	53	37.500	ENSTRUG00000013850	prdm5	60	38.636
ENSTRUG00000012719	-	54	35.238	ENSTRUG00000022843	-	50	35.238
ENSTRUG00000012719	-	52	38.000	ENSTRUG00000003277	zbtb17	90	35.000
ENSTRUG00000012719	-	55	40.000	ENSTRUG00000014476	-	78	40.196
ENSTRUG00000012719	-	51	41.045	ENSTRUG00000000995	-	69	41.045
ENSTRUG00000012719	-	54	38.060	ENSTRUG00000001268	-	94	39.604
ENSTRUG00000012719	-	50	40.789	ENSTRUG00000005321	-	93	40.789
ENSTRUG00000012719	-	97	61.564	ENSTRUG00000007620	scrt2	97	59.609
ENSTRUG00000012719	-	53	37.143	ENSTRUG00000007022	-	57	39.552
ENSTRUG00000012719	-	56	32.143	ENSTRUG00000005880	-	54	32.824
ENSTRUG00000012719	-	99	75.084	ENSTRUG00000011637	scrt1b	100	75.084
ENSTRUG00000012719	-	62	38.095	ENSTRUG00000022076	-	78	39.416

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000012719	-	100	85.953	ENSAPOG00000015197	-	100	85.284	Acanthochromis_polyacanthus
ENSTRUG00000012719	-	99	75.839	ENSAPOG00000009279	scrt1b	99	75.839	Acanthochromis_polyacanthus
ENSTRUG00000012719	-	97	63.390	ENSAPOG00000003680	scrt2	96	62.712	Acanthochromis_polyacanthus
ENSTRUG00000012719	-	100	90.970	ENSACIG00000006586	-	100	90.970	Amphilophus_citrinellus
ENSTRUG00000012719	-	97	55.238	ENSACIG00000001296	-	96	54.574	Amphilophus_citrinellus
ENSTRUG00000012719	-	99	74.832	ENSACIG00000013613	scrt1b	99	74.832	Amphilophus_citrinellus
ENSTRUG00000012719	-	97	63.668	ENSACIG00000012604	scrt2	96	62.976	Amphilophus_citrinellus
ENSTRUG00000012719	-	99	75.839	ENSAOCG00000003910	scrt1b	99	75.839	Amphiprion_ocellaris
ENSTRUG00000012719	-	97	63.390	ENSAOCG00000021557	scrt2	96	62.712	Amphiprion_ocellaris
ENSTRUG00000012719	-	100	91.639	ENSAOCG00000023304	-	100	90.970	Amphiprion_ocellaris
ENSTRUG00000012719	-	99	75.503	ENSAPEG00000000869	scrt1b	99	75.503	Amphiprion_percula
ENSTRUG00000012719	-	100	91.639	ENSAPEG00000005677	-	100	90.970	Amphiprion_percula
ENSTRUG00000012719	-	97	63.390	ENSAPEG00000022558	scrt2	96	62.712	Amphiprion_percula
ENSTRUG00000012719	-	99	74.411	ENSATEG00000002302	scrt1b	99	75.503	Anabas_testudineus
ENSTRUG00000012719	-	100	83.946	ENSATEG00000011660	-	100	83.278	Anabas_testudineus
ENSTRUG00000012719	-	97	61.562	ENSATEG00000023998	scrt2	97	60.938	Anabas_testudineus
ENSTRUG00000012719	-	97	53.153	ENSATEG00000003195	-	97	53.153	Anabas_testudineus
ENSTRUG00000012719	-	68	79.310	ENSACAG00000016109	SCRT2	91	79.310	Anolis_carolinensis
ENSTRUG00000012719	-	99	75.503	ENSACLG00000007162	scrt1b	99	75.503	Astatotilapia_calliptera
ENSTRUG00000012719	-	100	87.459	ENSACLG00000012046	-	100	87.459	Astatotilapia_calliptera
ENSTRUG00000012719	-	99	78.041	ENSAMXG00000038085	scrt1a	99	78.451	Astyanax_mexicanus
ENSTRUG00000012719	-	83	69.076	ENSAMXG00000034158	scrt2	87	69.076	Astyanax_mexicanus
ENSTRUG00000012719	-	99	74.074	ENSAMXG00000042624	SCRT1	100	73.559	Astyanax_mexicanus
ENSTRUG00000012719	-	54	61.111	WBGene00000468	ces-1	77	48.649	Caenorhabditis_elegans
ENSTRUG00000012719	-	87	59.701	ENSCPBG00000027613	SCRT2	100	59.701	Chrysemys_picta_bellii
ENSTRUG00000012719	-	99	76.094	ENSCPBG00000018899	SCRT1	99	76.094	Chrysemys_picta_bellii
ENSTRUG00000012719	-	100	89.632	ENSCSEG00000014892	-	100	88.963	Cynoglossus_semilaevis
ENSTRUG00000012719	-	99	73.401	ENSCSEG00000008596	scrt1b	99	74.832	Cynoglossus_semilaevis
ENSTRUG00000012719	-	97	63.057	ENSCSEG00000021542	scrt2	97	60.828	Cynoglossus_semilaevis
ENSTRUG00000012719	-	99	74.497	ENSCVAG00000009561	scrt1b	99	74.497	Cyprinodon_variegatus
ENSTRUG00000012719	-	97	60.188	ENSCVAG00000021038	scrt2	97	59.875	Cyprinodon_variegatus
ENSTRUG00000012719	-	100	90.970	ENSCVAG00000003190	-	100	90.301	Cyprinodon_variegatus
ENSTRUG00000012719	-	99	78.378	ENSDARG00000100821	scrt1a	99	78.378	Danio_rerio
ENSTRUG00000012719	-	99	75.676	ENSDARG00000040214	scrt1b	99	75.676	Danio_rerio
ENSTRUG00000012719	-	100	77.592	ENSELUG00000022228	scrt1a	100	77.592	Esox_lucius
ENSTRUG00000012719	-	97	60.185	ENSELUG00000023883	scrt2	96	59.443	Esox_lucius
ENSTRUG00000012719	-	99	77.627	ENSELUG00000005435	scrt1b	98	77.627	Esox_lucius
ENSTRUG00000012719	-	66	79.397	ENSFALG00000005718	SCRT2	97	67.871	Ficedula_albicollis
ENSTRUG00000012719	-	100	91.639	ENSFHEG00000009794	-	100	90.970	Fundulus_heteroclitus
ENSTRUG00000012719	-	99	74.832	ENSFHEG00000014820	scrt1b	99	74.832	Fundulus_heteroclitus
ENSTRUG00000012719	-	97	64.948	ENSFHEG00000005732	scrt2	96	64.605	Fundulus_heteroclitus
ENSTRUG00000012719	-	99	75.421	ENSGMOG00000000629	scrt1b	99	75.421	Gadus_morhua
ENSTRUG00000012719	-	97	56.918	ENSGMOG00000019519	scrt2	96	56.289	Gadus_morhua
ENSTRUG00000012719	-	56	96.825	ENSGMOG00000013833	-	56	96.825	Gadus_morhua
ENSTRUG00000012719	-	97	62.630	ENSGALG00000028912	SCRT2	97	62.630	Gallus_gallus
ENSTRUG00000012719	-	100	82.943	ENSGAFG00000009650	-	100	82.274	Gambusia_affinis
ENSTRUG00000012719	-	99	75.168	ENSGAFG00000007636	scrt1b	99	75.168	Gambusia_affinis
ENSTRUG00000012719	-	97	62.215	ENSGAFG00000003093	scrt2	97	61.889	Gambusia_affinis
ENSTRUG00000012719	-	99	73.649	ENSGACG00000008982	scrt1b	99	73.649	Gasterosteus_aculeatus
ENSTRUG00000012719	-	100	88.294	ENSGACG00000004072	-	100	87.960	Gasterosteus_aculeatus
ENSTRUG00000012719	-	96	62.369	ENSGAGG00000020761	SCRT2	96	62.369	Gopherus_agassizii
ENSTRUG00000012719	-	61	80.435	ENSGAGG00000020760	-	71	80.435	Gopherus_agassizii
ENSTRUG00000012719	-	99	76.271	ENSGAGG00000011736	SCRT1	99	76.271	Gopherus_agassizii
ENSTRUG00000012719	-	100	90.301	ENSHBUG00000019101	-	100	90.301	Haplochromis_burtoni
ENSTRUG00000012719	-	97	63.729	ENSHBUG00000012492	scrt2	96	62.373	Haplochromis_burtoni
ENSTRUG00000012719	-	99	75.503	ENSHBUG00000016621	scrt1b	99	75.503	Haplochromis_burtoni
ENSTRUG00000012719	-	99	74.161	ENSHCOG00000016704	scrt1b	99	74.161	Hippocampus_comes
ENSTRUG00000012719	-	100	73.443	ENSHCOG00000016179	-	100	73.770	Hippocampus_comes
ENSTRUG00000012719	-	97	60.000	ENSHCOG00000008116	scrt2	97	59.032	Hippocampus_comes
ENSTRUG00000012719	-	99	71.186	ENSIPUG00000005547	-	100	71.186	Ictalurus_punctatus
ENSTRUG00000012719	-	98	78.840	ENSIPUG00000004551	scrt1a	99	78.840	Ictalurus_punctatus
ENSTRUG00000012719	-	99	74.832	ENSKMAG00000005484	scrt1b	99	74.832	Kryptolebias_marmoratus
ENSTRUG00000012719	-	100	89.369	ENSKMAG00000009489	-	100	89.369	Kryptolebias_marmoratus
ENSTRUG00000012719	-	97	61.442	ENSKMAG00000018087	scrt2	97	60.815	Kryptolebias_marmoratus
ENSTRUG00000012719	-	100	91.304	ENSLBEG00000023388	-	100	92.308	Labrus_bergylta
ENSTRUG00000012719	-	97	60.748	ENSLBEG00000015419	scrt2	97	60.125	Labrus_bergylta
ENSTRUG00000012719	-	99	75.421	ENSLACG00000003588	SCRT1	99	75.421	Latimeria_chalumnae
ENSTRUG00000012719	-	99	78.114	ENSLOCG00000007573	scrt1b	99	78.114	Lepisosteus_oculatus
ENSTRUG00000012719	-	97	54.180	ENSLOCG00000002246	scrt2	97	52.870	Lepisosteus_oculatus
ENSTRUG00000012719	-	96	92.593	ENSMFAG00000035496	SCRT1	79	91.429	Macaca_fascicularis
ENSTRUG00000012719	-	99	74.411	ENSMAMG00000011698	scrt1b	99	75.503	Mastacembelus_armatus
ENSTRUG00000012719	-	97	60.494	ENSMAMG00000001291	scrt2	97	58.750	Mastacembelus_armatus
ENSTRUG00000012719	-	100	90.301	ENSMZEG00005026702	-	100	90.301	Maylandia_zebra
ENSTRUG00000012719	-	99	75.503	ENSMZEG00005005627	scrt1b	99	75.503	Maylandia_zebra
ENSTRUG00000012719	-	97	63.729	ENSMZEG00005026445	scrt2	96	62.373	Maylandia_zebra
ENSTRUG00000012719	-	64	81.250	ENSMGAG00000016579	SCRT2	97	67.339	Meleagris_gallopavo
ENSTRUG00000012719	-	99	73.490	ENSMMOG00000003327	scrt1b	99	73.490	Mola_mola
ENSTRUG00000012719	-	100	92.308	ENSMMOG00000018345	-	100	92.308	Mola_mola
ENSTRUG00000012719	-	97	59.937	ENSMMOG00000009272	scrt2	97	59.306	Mola_mola
ENSTRUG00000012719	-	99	75.084	ENSMALG00000012704	scrt1b	99	76.174	Monopterus_albus
ENSTRUG00000012719	-	97	61.921	ENSMALG00000013656	scrt2	96	60.596	Monopterus_albus
ENSTRUG00000012719	-	50	81.333	ENSNGAG00000020815	Scrt2	70	84.722	Nannospalax_galili
ENSTRUG00000012719	-	97	63.390	ENSNBRG00000007221	scrt2	96	62.034	Neolamprologus_brichardi
ENSTRUG00000012719	-	100	90.635	ENSNBRG00000014882	-	100	90.635	Neolamprologus_brichardi
ENSTRUG00000012719	-	99	73.490	ENSNBRG00000013983	scrt1b	99	73.490	Neolamprologus_brichardi
ENSTRUG00000012719	-	99	75.168	ENSONIG00000006007	scrt1b	99	75.168	Oreochromis_niloticus
ENSTRUG00000012719	-	97	59.310	ENSONIG00000003152	-	96	59.310	Oreochromis_niloticus
ENSTRUG00000012719	-	97	86.557	ENSONIG00000019809	-	100	86.557	Oreochromis_niloticus
ENSTRUG00000012719	-	97	61.442	ENSONIG00000016758	scrt2	97	59.248	Oreochromis_niloticus
ENSTRUG00000012719	-	97	60.815	ENSORLG00000024051	scrt2	97	60.502	Oryzias_latipes
ENSTRUG00000012719	-	99	74.074	ENSORLG00000025651	scrt1b	99	74.832	Oryzias_latipes
ENSTRUG00000012719	-	100	85.479	ENSORLG00000022825	-	100	85.479	Oryzias_latipes
ENSTRUG00000012719	-	97	60.815	ENSORLG00020011478	scrt2	97	60.502	Oryzias_latipes_hni
ENSTRUG00000012719	-	99	74.074	ENSORLG00020012967	scrt1b	99	74.832	Oryzias_latipes_hni
ENSTRUG00000012719	-	100	85.149	ENSORLG00015010104	-	100	85.149	Oryzias_latipes_hsok
ENSTRUG00000012719	-	99	74.074	ENSORLG00015019165	scrt1b	99	74.832	Oryzias_latipes_hsok
ENSTRUG00000012719	-	97	60.815	ENSORLG00015005524	scrt2	97	60.502	Oryzias_latipes_hsok
ENSTRUG00000012719	-	99	74.074	ENSOMEG00000003925	scrt1b	99	74.832	Oryzias_melastigma
ENSTRUG00000012719	-	97	61.129	ENSOMEG00000002661	scrt2	97	60.815	Oryzias_melastigma
ENSTRUG00000012719	-	100	87.960	ENSOMEG00000000286	-	100	87.960	Oryzias_melastigma
ENSTRUG00000012719	-	99	77.104	ENSPKIG00000022303	SCRT1	99	77.104	Paramormyrops_kingsleyae
ENSTRUG00000012719	-	99	77.778	ENSPKIG00000020085	scrt1a	99	77.778	Paramormyrops_kingsleyae
ENSTRUG00000012719	-	99	72.819	ENSPMGG00000002260	scrt1b	99	72.819	Periophthalmus_magnuspinnatus
ENSTRUG00000012719	-	100	87.584	ENSPMGG00000021402	-	100	87.584	Periophthalmus_magnuspinnatus
ENSTRUG00000012719	-	97	65.753	ENSPMGG00000016561	scrt2	96	65.753	Periophthalmus_magnuspinnatus
ENSTRUG00000012719	-	99	75.168	ENSPFOG00000017719	scrt1b	99	75.168	Poecilia_formosa
ENSTRUG00000012719	-	100	91.304	ENSPFOG00000005616	-	100	90.635	Poecilia_formosa
ENSTRUG00000012719	-	97	60.502	ENSPFOG00000007738	scrt2	97	60.188	Poecilia_formosa
ENSTRUG00000012719	-	100	91.304	ENSPLAG00000011718	-	100	90.635	Poecilia_latipinna
ENSTRUG00000012719	-	99	75.168	ENSPLAG00000009876	scrt1b	99	75.168	Poecilia_latipinna
ENSTRUG00000012719	-	97	64.333	ENSPLAG00000005765	scrt2	96	64.527	Poecilia_latipinna
ENSTRUG00000012719	-	99	75.168	ENSPMEG00000013274	scrt1b	99	75.168	Poecilia_mexicana
ENSTRUG00000012719	-	100	91.304	ENSPMEG00000011706	-	100	90.635	Poecilia_mexicana
ENSTRUG00000012719	-	97	64.333	ENSPMEG00000001538	scrt2	96	64.527	Poecilia_mexicana
ENSTRUG00000012719	-	100	91.304	ENSPREG00000012166	-	100	90.635	Poecilia_reticulata
ENSTRUG00000012719	-	97	60.502	ENSPREG00000001147	scrt2	97	60.188	Poecilia_reticulata
ENSTRUG00000012719	-	99	75.168	ENSPREG00000018985	scrt1b	99	75.168	Poecilia_reticulata
ENSTRUG00000012719	-	97	63.729	ENSPNYG00000013109	scrt2	96	62.373	Pundamilia_nyererei
ENSTRUG00000012719	-	99	75.503	ENSPNYG00000017733	scrt1b	99	75.503	Pundamilia_nyererei
ENSTRUG00000012719	-	100	89.967	ENSPNYG00000008865	-	100	89.967	Pundamilia_nyererei
ENSTRUG00000012719	-	99	78.788	ENSPNAG00000017415	scrt1a	99	78.788	Pygocentrus_nattereri
ENSTRUG00000012719	-	99	73.898	ENSPNAG00000027880	-	100	73.898	Pygocentrus_nattereri
ENSTRUG00000012719	-	99	77.104	ENSSFOG00015001195	SCRT1	99	77.104	Scleropages_formosus
ENSTRUG00000012719	-	100	88.449	ENSSMAG00000005122	-	100	87.789	Scophthalmus_maximus
ENSTRUG00000012719	-	100	75.333	ENSSMAG00000019207	scrt1b	100	75.333	Scophthalmus_maximus
ENSTRUG00000012719	-	99	75.839	ENSSDUG00000007752	scrt1b	99	75.839	Seriola_dumerili
ENSTRUG00000012719	-	100	90.635	ENSSDUG00000013215	-	100	89.967	Seriola_dumerili
ENSTRUG00000012719	-	98	61.093	ENSSDUG00000001637	scrt2	96	59.164	Seriola_dumerili
ENSTRUG00000012719	-	99	75.839	ENSSLDG00000017166	scrt1b	99	75.839	Seriola_lalandi_dorsalis
ENSTRUG00000012719	-	97	60.938	ENSSLDG00000013565	scrt2	97	59.062	Seriola_lalandi_dorsalis
ENSTRUG00000012719	-	100	90.635	ENSSLDG00000016454	-	100	89.967	Seriola_lalandi_dorsalis
ENSTRUG00000012719	-	97	62.963	ENSSPUG00000018637	SCRT2	97	62.963	Sphenodon_punctatus
ENSTRUG00000012719	-	97	64.068	ENSSPAG00000014018	scrt2	96	62.712	Stegastes_partitus
ENSTRUG00000012719	-	99	75.839	ENSSPAG00000002200	scrt1b	99	75.839	Stegastes_partitus
ENSTRUG00000012719	-	100	92.642	ENSSPAG00000006788	-	100	91.973	Stegastes_partitus
ENSTRUG00000012719	-	66	79.293	ENSTGUG00000006801	SCRT2	99	67.742	Taeniopygia_guttata
ENSTRUG00000012719	-	99	74.832	ENSTNIG00000018384	scrt1b	99	74.832	Tetraodon_nigroviridis
ENSTRUG00000012719	-	97	64.407	ENSTNIG00000012473	scrt2	97	64.407	Tetraodon_nigroviridis
ENSTRUG00000012719	-	99	75.168	ENSXCOG00000019675	scrt1b	99	75.168	Xiphophorus_couchianus
ENSTRUG00000012719	-	97	61.489	ENSXCOG00000014367	scrt2	97	61.165	Xiphophorus_couchianus
ENSTRUG00000012719	-	100	82.609	ENSXCOG00000019861	-	100	81.940	Xiphophorus_couchianus
ENSTRUG00000012719	-	99	75.168	ENSXMAG00000027885	scrt1b	99	75.168	Xiphophorus_maculatus
ENSTRUG00000012719	-	97	59.813	ENSXMAG00000028567	scrt2	97	59.502	Xiphophorus_maculatus
ENSTRUG00000012719	-	100	91.304	ENSXMAG00000015353	-	100	90.635	Xiphophorus_maculatus