EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000012770 (Gene tree)
Gene ID: 101079369
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: zinc finger protein 36%2C C3H1 type-like 2
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 1830 bases
Position: chr8:9535599-9537428
Accession: 101079369
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000032324	zf-CCCH	PF00642.24	7.9e-26	1	3
ENSTRUP00000032324	zf-CCCH	PF00642.24	7.9e-26	2	3
ENSTRUP00000032324	zf-CCCH	PF00642.24	7.9e-26	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000032448	-	1710	XM_003966811	ENSTRUP00000032324	317 (aa)	XP_003966860	H2U5V8

Gene Model

Click here to download ENSTRUG00000012770's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru04114	Oocyte meiosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000012770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000012770	cth1	90	61.189	ENSAPOG00000012552	cth1	95	62.238	Acanthochromis_polyacanthus
ENSTRUG00000012770	cth1	89	60.140	ENSACIG00000016026	cth1	99	60.123	Amphilophus_citrinellus
ENSTRUG00000012770	cth1	100	63.636	ENSAOCG00000001644	cth1	100	64.263	Amphiprion_ocellaris
ENSTRUG00000012770	cth1	100	63.636	ENSAPEG00000008930	cth1	100	64.263	Amphiprion_percula
ENSTRUG00000012770	cth1	99	68.421	ENSATEG00000002281	cth1	97	68.421	Anabas_testudineus
ENSTRUG00000012770	cth1	90	60.764	ENSACLG00000015353	cth1	95	58.333	Astatotilapia_calliptera
ENSTRUG00000012770	cth1	97	52.795	ENSAMXG00000025717	cth1	98	54.688	Astyanax_mexicanus
ENSTRUG00000012770	cth1	100	65.538	ENSCSEG00000014617	cth1	100	65.538	Cynoglossus_semilaevis
ENSTRUG00000012770	cth1	100	57.367	ENSCVAG00000001680	cth1	65	58.621	Cyprinodon_variegatus
ENSTRUG00000012770	cth1	91	53.535	ENSDARG00000057328	cth1	99	52.147	Danio_rerio
ENSTRUG00000012770	cth1	99	52.632	ENSELUG00000012738	cth1	99	50.284	Esox_lucius
ENSTRUG00000012770	cth1	100	59.568	ENSFHEG00000022665	cth1	100	57.716	Fundulus_heteroclitus
ENSTRUG00000012770	cth1	99	59.385	ENSGMOG00000007360	cth1	100	56.923	Gadus_morhua
ENSTRUG00000012770	cth1	100	57.994	ENSGAFG00000019288	cth1	100	57.944	Gambusia_affinis
ENSTRUG00000012770	cth1	99	61.875	ENSGACG00000000802	cth1	99	60.625	Gasterosteus_aculeatus
ENSTRUG00000012770	cth1	100	60.625	ENSHBUG00000014400	cth1	100	58.438	Haplochromis_burtoni
ENSTRUG00000012770	cth1	99	52.698	ENSHCOG00000010276	cth1	99	51.429	Hippocampus_comes
ENSTRUG00000012770	cth1	97	55.937	ENSIPUG00000018040	cth1	96	55.312	Ictalurus_punctatus
ENSTRUG00000012770	cth1	100	60.312	ENSKMAG00000005944	cth1	100	58.125	Kryptolebias_marmoratus
ENSTRUG00000012770	cth1	100	70.717	ENSLBEG00000019253	cth1	100	71.028	Labrus_bergylta
ENSTRUG00000012770	cth1	74	48.598	ENSLOCG00000002047	cth1	98	49.065	Lepisosteus_oculatus
ENSTRUG00000012770	cth1	99	51.323	ENSMAMG00000001525	cth1	63	62.553	Mastacembelus_armatus
ENSTRUG00000012770	cth1	99	61.321	ENSMZEG00005022335	cth1	99	59.119	Maylandia_zebra
ENSTRUG00000012770	cth1	94	67.550	ENSMMOG00000020518	cth1	100	67.657	Mola_mola
ENSTRUG00000012770	cth1	100	57.368	ENSMALG00000020738	cth1	66	62.302	Monopterus_albus
ENSTRUG00000012770	cth1	90	60.563	ENSNBRG00000022789	cth1	89	58.099	Neolamprologus_brichardi
ENSTRUG00000012770	cth1	99	59.375	ENSONIG00000021318	cth1	99	59.062	Oreochromis_niloticus
ENSTRUG00000012770	cth1	100	54.688	ENSORLG00000022847	cth1	100	52.812	Oryzias_latipes
ENSTRUG00000012770	cth1	100	54.375	ENSORLG00020011979	cth1	100	52.812	Oryzias_latipes_hni
ENSTRUG00000012770	cth1	100	54.688	ENSORLG00015013084	cth1	100	52.812	Oryzias_latipes_hsok
ENSTRUG00000012770	cth1	100	54.232	ENSOMEG00000005809	cth1	85	57.321	Oryzias_melastigma
ENSTRUG00000012770	cth1	96	48.438	ENSPKIG00000015883	cth1	94	45.963	Paramormyrops_kingsleyae
ENSTRUG00000012770	cth1	99	63.272	ENSPMGG00000004275	cth1	100	63.272	Periophthalmus_magnuspinnatus
ENSTRUG00000012770	cth1	100	59.561	ENSPFOG00000013583	cth1	94	59.561	Poecilia_formosa
ENSTRUG00000012770	cth1	100	59.561	ENSPLAG00000018158	cth1	94	59.561	Poecilia_latipinna
ENSTRUG00000012770	cth1	100	59.190	ENSPMEG00000005744	cth1	100	59.190	Poecilia_mexicana
ENSTRUG00000012770	cth1	99	59.494	ENSPREG00000004099	cth1	99	60.317	Poecilia_reticulata
ENSTRUG00000012770	cth1	89	60.351	ENSPNYG00000016705	cth1	92	57.544	Pundamilia_nyererei
ENSTRUG00000012770	cth1	99	53.916	ENSPNAG00000013147	cth1	99	52.679	Pygocentrus_nattereri
ENSTRUG00000012770	cth1	91	51.803	ENSSFOG00015017190	cth1	65	59.716	Scleropages_formosus
ENSTRUG00000012770	cth1	99	67.601	ENSSMAG00000007977	cth1	99	69.255	Scophthalmus_maximus
ENSTRUG00000012770	cth1	99	69.909	ENSSDUG00000004321	cth1	99	70.213	Seriola_dumerili
ENSTRUG00000012770	cth1	99	68.788	ENSSLDG00000004516	-	99	69.091	Seriola_lalandi_dorsalis
ENSTRUG00000012770	cth1	99	68.788	ENSSLDG00000010023	-	100	69.091	Seriola_lalandi_dorsalis
ENSTRUG00000012770	cth1	99	68.788	ENSSLDG00000012760	cth1	99	69.091	Seriola_lalandi_dorsalis
ENSTRUG00000012770	cth1	100	64.798	ENSSPAG00000018659	cth1	100	65.732	Stegastes_partitus
ENSTRUG00000012770	cth1	100	85.804	ENSTNIG00000000740	cth1	100	85.804	Tetraodon_nigroviridis
ENSTRUG00000012770	cth1	83	55.303	ENSXCOG00000003710	cth1	82	53.226	Xiphophorus_couchianus
ENSTRUG00000012770	cth1	100	59.119	ENSXMAG00000023885	cth1	100	59.119	Xiphophorus_maculatus