EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTRUG00000012839 (Gene tree)
Gene ID
101071263
Gene Symbol
apobec2b
Alias
apo2b
Full Name
probable C->U-editing enzyme APOBEC-2
Gene Type
protein_coding
Species
Takifugu_rubripes
Status
putative
Strand
Minus strand
Length
1562 bases
Position
chr3:8388032-8389593
Accession
101071263
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTRUP00000032510APOBEC_NPF08210.111.7e-4411
ENSTRUP00000032510APOBEC_CPF05240.142.2e-2511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTRUT00000032634-861XM_003963287ENSTRUP00000032510262 (aa)XP_003963336H2U6E4
Gene Model
Click here to download ENSTRUG00000012839's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000012839's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTRUG00000012839apobec2b10046.442ENSTRUG00000009123apobec2a10046.442
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTRUG00000012839apobec2b7059.162ENSG00000124701APOBEC28559.162Homo_sapiens
ENSTRUG00000012839apobec2b10076.493ENSAPOG00000019390apobec2b10077.239Acanthochromis_polyacanthus
ENSTRUG00000012839apobec2b8945.749ENSAMEG00000004467APOBEC29845.749Ailuropoda_melanoleuca
ENSTRUG00000012839apobec2b7051.075ENSACIG00000016370apobec2a7649.231Amphilophus_citrinellus
ENSTRUG00000012839apobec2b10072.388ENSACIG00000002472APOBEC210069.582Amphilophus_citrinellus
ENSTRUG00000012839apobec2b10075.746ENSAOCG00000023355apobec2b10076.493Amphiprion_ocellaris
ENSTRUG00000012839apobec2b10044.361ENSAOCG00000003291apobec2a10044.361Amphiprion_ocellaris
ENSTRUG00000012839apobec2b9147.917ENSAPEG00000003630apobec2a9647.917Amphiprion_percula
ENSTRUG00000012839apobec2b10075.746ENSAPEG00000004591apobec2b10076.493Amphiprion_percula
ENSTRUG00000012839apobec2b10072.491ENSATEG00000023043APOBEC210073.606Anabas_testudineus
ENSTRUG00000012839apobec2b10045.833ENSATEG00000000956apobec2a9853.714Anabas_testudineus
ENSTRUG00000012839apobec2b8249.091ENSAPLG00000002895APOBEC29749.091Anas_platyrhynchos
ENSTRUG00000012839apobec2b7150.262ENSACAG00000016506APOBEC29552.809Anolis_carolinensis
ENSTRUG00000012839apobec2b7058.639ENSANAG00000026993APOBEC28558.639Aotus_nancymaae
ENSTRUG00000012839apobec2b10072.015ENSACLG00000007634APOBEC210072.388Astatotilapia_calliptera
ENSTRUG00000012839apobec2b6654.070ENSACLG00000026736-9754.070Astatotilapia_calliptera
ENSTRUG00000012839apobec2b8152.273ENSAMXG00000042992apobec2a9450.612Astyanax_mexicanus
ENSTRUG00000012839apobec2b8356.696ENSAMXG00000015966apobec2b9353.585Astyanax_mexicanus
ENSTRUG00000012839apobec2b7657.005ENSBTAG00000005974APOBEC27353.304Bos_taurus
ENSTRUG00000012839apobec2b7058.639ENSCJAG00000004063APOBEC28558.639Callithrix_jacchus
ENSTRUG00000012839apobec2b7059.162ENSCAFG00000001575APOBEC28559.162Canis_familiaris
ENSTRUG00000012839apobec2b7059.162ENSCAFG00020008306APOBEC28559.162Canis_lupus_dingo
ENSTRUG00000012839apobec2b7059.162ENSCHIG00000026348APOBEC28559.162Capra_hircus
ENSTRUG00000012839apobec2b7059.686ENSTSYG00000008206APOBEC28459.686Carlito_syrichta
ENSTRUG00000012839apobec2b7058.639ENSCAPG00000015084APOBEC29852.679Cavia_aperea
ENSTRUG00000012839apobec2b7058.639ENSCPOG00000036103APOBEC29852.679Cavia_porcellus
ENSTRUG00000012839apobec2b7058.639ENSCCAG00000033987APOBEC28558.639Cebus_capucinus
ENSTRUG00000012839apobec2b7059.162ENSCATG00000010691APOBEC28559.162Cercocebus_atys
ENSTRUG00000012839apobec2b7059.162ENSCLAG00000013817APOBEC28459.162Chinchilla_lanigera
ENSTRUG00000012839apobec2b7059.162ENSCSAG00000011177APOBEC28559.162Chlorocebus_sabaeus
ENSTRUG00000012839apobec2b6656.667ENSCHOG00000008930APOBEC210056.667Choloepus_hoffmanni
ENSTRUG00000012839apobec2b6953.514ENSCPBG00000017469APOBEC28553.763Chrysemys_picta_bellii
ENSTRUG00000012839apobec2b7058.639ENSCANG00000035072APOBEC28558.639Colobus_angolensis_palliatus
ENSTRUG00000012839apobec2b7059.162ENSCGRG00001014983Apobec28559.162Cricetulus_griseus_chok1gshd
ENSTRUG00000012839apobec2b7059.162ENSCGRG00000007835Apobec28559.162Cricetulus_griseus_crigri
ENSTRUG00000012839apobec2b7271.277ENSCSEG00000000690-10059.925Cynoglossus_semilaevis
ENSTRUG00000012839apobec2b10046.970ENSCSEG00000020201apobec2a10046.970Cynoglossus_semilaevis
ENSTRUG00000012839apobec2b10070.301ENSCVAG00000012342apobec2b10071.429Cyprinodon_variegatus
ENSTRUG00000012839apobec2b8954.852ENSDARG00000113992apobec2b10052.518Danio_rerio
ENSTRUG00000012839apobec2b10050.758ENSDARG00000018881apobec2a9451.282Danio_rerio
ENSTRUG00000012839apobec2b7041.294ENSDNOG00000033914APOBEC29937.931Dasypus_novemcinctus
ENSTRUG00000012839apobec2b7055.497ENSDORG00000006447Apobec28355.497Dipodomys_ordii
ENSTRUG00000012839apobec2b7057.068ENSETEG00000000624APOBEC28357.068Echinops_telfairi
ENSTRUG00000012839apobec2b5957.233ENSEASG00005002937APOBEC28357.233Equus_asinus_asinus
ENSTRUG00000012839apobec2b7058.639ENSECAG00000006576APOBEC28558.639Equus_caballus
ENSTRUG00000012839apobec2b7059.162ENSEEUG00000006046APOBEC28559.162Erinaceus_europaeus
ENSTRUG00000012839apobec2b7157.672ENSELUG00000003736apobec2a8949.804Esox_lucius
ENSTRUG00000012839apobec2b7058.115ENSFCAG00000004108APOBEC29952.252Felis_catus
ENSTRUG00000012839apobec2b6946.809ENSFALG00000003910APOBEC29942.982Ficedula_albicollis
ENSTRUG00000012839apobec2b7058.115ENSFDAG00000006015APOBEC28558.115Fukomys_damarensis
ENSTRUG00000012839apobec2b8078.469ENSFHEG00000005492apobec2b9675.556Fundulus_heteroclitus
ENSTRUG00000012839apobec2b7672.139ENSGMOG00000006819apobec2b10063.019Gadus_morhua
ENSTRUG00000012839apobec2b6656.250ENSGMOG00000007028apobec2a10056.250Gadus_morhua
ENSTRUG00000012839apobec2b8249.321ENSGALG00000003226APOBEC29949.321Gallus_gallus
ENSTRUG00000012839apobec2b10068.797ENSGAFG00000007634apobec2b8769.925Gambusia_affinis
ENSTRUG00000012839apobec2b10069.962ENSGACG00000009663apobec2b9977.027Gasterosteus_aculeatus
ENSTRUG00000012839apobec2b7154.255ENSGACG00000011671apobec2a10054.255Gasterosteus_aculeatus
ENSTRUG00000012839apobec2b6953.514ENSGAGG00000010347APOBEC29948.261Gopherus_agassizii
ENSTRUG00000012839apobec2b7059.162ENSGGOG00000001099APOBEC28359.162Gorilla_gorilla
ENSTRUG00000012839apobec2b10072.015ENSHBUG00000005993apobec2b10072.388Haplochromis_burtoni
ENSTRUG00000012839apobec2b8852.459ENSHBUG00000015890apobec2a9852.459Haplochromis_burtoni
ENSTRUG00000012839apobec2b7057.592ENSHGLG00000017169APOBEC28457.592Heterocephalus_glaber_female
ENSTRUG00000012839apobec2b7057.592ENSHGLG00100019442APOBEC28457.592Heterocephalus_glaber_male
ENSTRUG00000012839apobec2b8946.311ENSHCOG00000020319apobec2a9946.311Hippocampus_comes
ENSTRUG00000012839apobec2b10070.677ENSHCOG00000002712APOBEC210070.677Hippocampus_comes
ENSTRUG00000012839apobec2b8152.968ENSIPUG00000017355apobec2a6849.160Ictalurus_punctatus
ENSTRUG00000012839apobec2b10052.364ENSIPUG00000013784Apobec210053.091Ictalurus_punctatus
ENSTRUG00000012839apobec2b7057.592ENSSTOG00000023643APOBEC28557.592Ictidomys_tridecemlineatus
ENSTRUG00000012839apobec2b7058.115ENSJJAG00000009733Apobec28558.115Jaculus_jaculus
ENSTRUG00000012839apobec2b9968.679ENSKMAG00000020631apobec2b9969.434Kryptolebias_marmoratus
ENSTRUG00000012839apobec2b8476.018ENSLBEG00000009422-10070.357Labrus_bergylta
ENSTRUG00000012839apobec2b10047.170ENSLBEG00000025214apobec2a10047.170Labrus_bergylta
ENSTRUG00000012839apobec2b8253.604ENSLACG00000015985APOBEC29753.604Latimeria_chalumnae
ENSTRUG00000012839apobec2b8057.075ENSLOCG00000012415apobec2b9951.087Lepisosteus_oculatus
ENSTRUG00000012839apobec2b7057.592ENSLAFG00000016563APOBEC28557.592Loxodonta_africana
ENSTRUG00000012839apobec2b7059.162ENSMFAG00000044645APOBEC28559.162Macaca_fascicularis
ENSTRUG00000012839apobec2b7059.162ENSMMUG00000021171APOBEC28559.162Macaca_mulatta
ENSTRUG00000012839apobec2b7059.162ENSMNEG00000045497APOBEC28559.162Macaca_nemestrina
ENSTRUG00000012839apobec2b7059.162ENSMLEG00000028328APOBEC28559.162Mandrillus_leucophaeus
ENSTRUG00000012839apobec2b10048.496ENSMAMG00000023685apobec2a9748.496Mastacembelus_armatus
ENSTRUG00000012839apobec2b10072.059ENSMAMG00000007926APOBEC210072.794Mastacembelus_armatus
ENSTRUG00000012839apobec2b8454.348ENSMZEG00005005240-9854.348Maylandia_zebra
ENSTRUG00000012839apobec2b10072.761ENSMZEG00005027159APOBEC210072.761Maylandia_zebra
ENSTRUG00000012839apobec2b8648.918ENSMGAG00000010173APOBEC210048.918Meleagris_gallopavo
ENSTRUG00000012839apobec2b7059.686ENSMAUG00000011016Apobec28559.686Mesocricetus_auratus
ENSTRUG00000012839apobec2b7059.162ENSMICG00000043339APOBEC28559.162Microcebus_murinus
ENSTRUG00000012839apobec2b7059.686ENSMOCG00000001904Apobec28559.686Microtus_ochrogaster
ENSTRUG00000012839apobec2b10075.188ENSMMOG00000008681apobec2b10076.316Mola_mola
ENSTRUG00000012839apobec2b7055.789ENSMODG00000013090APOBEC28655.789Monodelphis_domestica
ENSTRUG00000012839apobec2b10046.241ENSMALG00000020523apobec2a10046.992Monopterus_albus
ENSTRUG00000012839apobec2b10070.076ENSMALG00000013779APOBEC210071.910Monopterus_albus
ENSTRUG00000012839apobec2b7059.162MGP_CAROLIEiJ_G0021727Apobec28559.162Mus_caroli
ENSTRUG00000012839apobec2b7059.162ENSMUSG00000040694Apobec28559.162Mus_musculus
ENSTRUG00000012839apobec2b7059.162MGP_PahariEiJ_G0020716Apobec28559.162Mus_pahari
ENSTRUG00000012839apobec2b7059.162ENSMPUG00000013691APOBEC28259.162Mustela_putorius_furo
ENSTRUG00000012839apobec2b7058.639ENSMLUG00000011327APOBEC28358.639Myotis_lucifugus
ENSTRUG00000012839apobec2b7058.639ENSNGAG00000013717Apobec28558.639Nannospalax_galili
ENSTRUG00000012839apobec2b7258.333ENSNBRG00000021776apobec2a9453.648Neolamprologus_brichardi
ENSTRUG00000012839apobec2b10073.134ENSNBRG00000018806apobec2b8973.134Neolamprologus_brichardi
ENSTRUG00000012839apobec2b7059.162ENSNLEG00000005057APOBEC28559.162Nomascus_leucogenys
ENSTRUG00000012839apobec2b7056.316ENSMEUG00000011623APOBEC28656.316Notamacropus_eugenii
ENSTRUG00000012839apobec2b7755.238ENSOPRG00000014808APOBEC29255.238Ochotona_princeps
ENSTRUG00000012839apobec2b7059.162ENSODEG00000016183APOBEC28359.162Octodon_degus
ENSTRUG00000012839apobec2b10073.134ENSONIG00000012289apobec2b10073.134Oreochromis_niloticus
ENSTRUG00000012839apobec2b9948.679ENSONIG00000004644-9852.675Oreochromis_niloticus
ENSTRUG00000012839apobec2b6252.381ENSOANG00000000824APOBEC29950.829Ornithorhynchus_anatinus
ENSTRUG00000012839apobec2b7752.857ENSOCUG00000028008APOBEC29352.857Oryctolagus_cuniculus
ENSTRUG00000012839apobec2b9948.669ENSORLG00000010752apobec2a9948.669Oryzias_latipes
ENSTRUG00000012839apobec2b10068.421ENSORLG00000022372APOBEC210069.925Oryzias_latipes
ENSTRUG00000012839apobec2b9948.669ENSORLG00020004153apobec2a9948.669Oryzias_latipes_hni
ENSTRUG00000012839apobec2b10068.045ENSORLG00020006164APOBEC210069.549Oryzias_latipes_hni
ENSTRUG00000012839apobec2b10068.045ENSORLG00015022089-10069.549Oryzias_latipes_hsok
ENSTRUG00000012839apobec2b9948.669ENSORLG00015021781apobec2a9948.669Oryzias_latipes_hsok
ENSTRUG00000012839apobec2b9949.430ENSOMEG00000001311apobec2a9949.430Oryzias_melastigma
ENSTRUG00000012839apobec2b10068.797ENSOMEG00000015449APOBEC210069.549Oryzias_melastigma
ENSTRUG00000012839apobec2b7058.639ENSOGAG00000002632APOBEC28558.639Otolemur_garnettii
ENSTRUG00000012839apobec2b7059.686ENSOARG00000000820APOBEC28559.686Ovis_aries
ENSTRUG00000012839apobec2b7059.162ENSPPAG00000035598APOBEC28359.162Pan_paniscus
ENSTRUG00000012839apobec2b7058.115ENSPPRG00000008530APOBEC29952.252Panthera_pardus
ENSTRUG00000012839apobec2b7058.115ENSPTIG00000011084APOBEC28558.115Panthera_tigris_altaica
ENSTRUG00000012839apobec2b7059.162ENSPTRG00000029679APOBEC28359.162Pan_troglodytes
ENSTRUG00000012839apobec2b7059.162ENSPANG00000007121APOBEC28559.162Papio_anubis
ENSTRUG00000012839apobec2b8752.174ENSPKIG00000005395apobec2a9352.174Paramormyrops_kingsleyae
ENSTRUG00000012839apobec2b9153.909ENSPKIG00000004741apobec2b9053.333Paramormyrops_kingsleyae
ENSTRUG00000012839apobec2b6955.135ENSPSIG00000013480APOBEC29650.909Pelodiscus_sinensis
ENSTRUG00000012839apobec2b10070.000ENSPMGG00000002686APOBEC28070.000Periophthalmus_magnuspinnatus
ENSTRUG00000012839apobec2b8454.709ENSPMGG00000004044apobec2a9949.248Periophthalmus_magnuspinnatus
ENSTRUG00000012839apobec2b7060.209ENSPEMG00000005724Apobec28560.209Peromyscus_maniculatus_bairdii
ENSTRUG00000012839apobec2b10068.797ENSPFOG00000001216apobec2b10070.301Poecilia_formosa
ENSTRUG00000012839apobec2b10068.797ENSPLAG00000002074apobec2b10070.301Poecilia_latipinna
ENSTRUG00000012839apobec2b10069.173ENSPMEG00000017537apobec2b10070.677Poecilia_mexicana
ENSTRUG00000012839apobec2b10068.421ENSPREG00000020060apobec2b8769.925Poecilia_reticulata
ENSTRUG00000012839apobec2b7058.639ENSPPYG00000016586APOBEC28558.639Pongo_abelii
ENSTRUG00000012839apobec2b7057.592ENSPCAG00000011433APOBEC210057.592Procavia_capensis
ENSTRUG00000012839apobec2b7059.686ENSPCOG00000026935APOBEC28559.686Propithecus_coquereli
ENSTRUG00000012839apobec2b7058.639ENSPVAG00000008316APOBEC28558.639Pteropus_vampyrus
ENSTRUG00000012839apobec2b10072.761ENSPNYG00000016747apobec2b10073.134Pundamilia_nyererei
ENSTRUG00000012839apobec2b7955.140ENSPNAG00000013666apobec2b10050.000Pygocentrus_nattereri
ENSTRUG00000012839apobec2b9849.049ENSPNAG00000010382apobec2a9649.049Pygocentrus_nattereri
ENSTRUG00000012839apobec2b7059.162ENSRNOG00000012303Apobec28559.162Rattus_norvegicus
ENSTRUG00000012839apobec2b7059.162ENSRBIG00000044756APOBEC28559.162Rhinopithecus_bieti
ENSTRUG00000012839apobec2b7058.639ENSRROG00000030082APOBEC28558.639Rhinopithecus_roxellana
ENSTRUG00000012839apobec2b7058.639ENSSBOG00000028496APOBEC28558.639Saimiri_boliviensis_boliviensis
ENSTRUG00000012839apobec2b7853.081ENSSHAG00000017771APOBEC29851.818Sarcophilus_harrisii
ENSTRUG00000012839apobec2b6350.000ENSSFOG00015005437-7150.000Scleropages_formosus
ENSTRUG00000012839apobec2b8457.021ENSSFOG00015022920apobec210053.929Scleropages_formosus
ENSTRUG00000012839apobec2b7381.771ENSSMAG00000005110APOBEC210072.364Scophthalmus_maximus
ENSTRUG00000012839apobec2b10047.727ENSSMAG00000001011apobec2a7447.727Scophthalmus_maximus
ENSTRUG00000012839apobec2b10046.212ENSSDUG00000007013apobec2a10046.212Seriola_dumerili
ENSTRUG00000012839apobec2b8479.638ENSSDUG00000014543apobec2b10075.746Seriola_dumerili
ENSTRUG00000012839apobec2b8479.638ENSSLDG00000003321apobec2b10075.746Seriola_lalandi_dorsalis
ENSTRUG00000012839apobec2b10047.744ENSSLDG00000020199apobec2a10047.744Seriola_lalandi_dorsalis
ENSTRUG00000012839apobec2b6648.333ENSSPUG00000010839APOBEC28748.889Sphenodon_punctatus
ENSTRUG00000012839apobec2b10073.881ENSSPAG00000005253apobec2b10074.627Stegastes_partitus
ENSTRUG00000012839apobec2b10045.896ENSSPAG00000016299-10045.896Stegastes_partitus
ENSTRUG00000012839apobec2b7655.769ENSSSCG00000036018APOBEC29355.769Sus_scrofa
ENSTRUG00000012839apobec2b6954.255ENSTGUG00000018533APOBEC29950.000Taeniopygia_guttata
ENSTRUG00000012839apobec2b10090.076ENSTNIG00000015038apobec2b10090.076Tetraodon_nigroviridis
ENSTRUG00000012839apobec2b7058.639ENSTBEG00000003553APOBEC28558.639Tupaia_belangeri
ENSTRUG00000012839apobec2b7057.895ENSTTRG00000013392APOBEC28557.895Tursiops_truncatus
ENSTRUG00000012839apobec2b7058.115ENSUAMG00000027667APOBEC28458.115Ursus_americanus
ENSTRUG00000012839apobec2b7059.162ENSVVUG00000026617APOBEC28559.162Vulpes_vulpes
ENSTRUG00000012839apobec2b7047.236ENSXETG00000008007apobec28447.236Xenopus_tropicalis
ENSTRUG00000012839apobec2b10065.926ENSXCOG00000007398apobec2b10067.778Xiphophorus_couchianus
ENSTRUG00000012839apobec2b10066.667ENSXMAG00000008134apobec2b10068.519Xiphophorus_maculatus

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