EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000012888 (Gene tree)
Gene ID: 101061043
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: vigilin-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 8550 bases
Position: chr8:12999304-13007853
Accession: 101061043
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000032657	KH_1	PF00013.29	5.7e-185	1	14
ENSTRUP00000032657	KH_1	PF00013.29	5.7e-185	2	14
ENSTRUP00000032657	KH_1	PF00013.29	5.7e-185	3	14
ENSTRUP00000032657	KH_1	PF00013.29	5.7e-185	4	14
ENSTRUP00000032657	KH_1	PF00013.29	5.7e-185	5	14
ENSTRUP00000032657	KH_1	PF00013.29	5.7e-185	6	14
ENSTRUP00000032657	KH_1	PF00013.29	5.7e-185	7	14
ENSTRUP00000032657	KH_1	PF00013.29	5.7e-185	8	14
ENSTRUP00000032657	KH_1	PF00013.29	5.7e-185	9	14
ENSTRUP00000032657	KH_1	PF00013.29	5.7e-185	10	14
ENSTRUP00000032657	KH_1	PF00013.29	5.7e-185	11	14
ENSTRUP00000032657	KH_1	PF00013.29	5.7e-185	12	14
ENSTRUP00000032657	KH_1	PF00013.29	5.7e-185	13	14
ENSTRUP00000032657	KH_1	PF00013.29	5.7e-185	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000032782	-	4093	XM_011606673	ENSTRUP00000032657	1267 (aa)	XP_011604975	H2U6U1

Gene Model

Click here to download ENSTRUG00000012888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000012888's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000012888	hdlbpb	99	69.937	ENSTRUG00000012148	hdlbpa	98	69.859

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000012888	hdlbpb	99	92.874	ENSAPOG00000006904	hdlbpb	98	92.874	Acanthochromis_polyacanthus
ENSTRUG00000012888	hdlbpb	99	88.013	ENSACIG00000016154	hdlbpb	98	87.934	Amphilophus_citrinellus
ENSTRUG00000012888	hdlbpb	99	93.428	ENSAOCG00000004083	hdlbpb	98	93.428	Amphiprion_ocellaris
ENSTRUG00000012888	hdlbpb	99	93.349	ENSAPEG00000012270	hdlbpb	98	93.349	Amphiprion_percula
ENSTRUG00000012888	hdlbpb	99	92.637	ENSATEG00000019877	hdlbpb	98	92.716	Anabas_testudineus
ENSTRUG00000012888	hdlbpb	99	79.335	ENSACAG00000003606	-	98	79.335	Anolis_carolinensis
ENSTRUG00000012888	hdlbpb	99	92.795	ENSACLG00000006618	hdlbpb	98	92.874	Astatotilapia_calliptera
ENSTRUG00000012888	hdlbpb	99	74.250	ENSAMXG00000019946	hdlbpb	97	74.250	Astyanax_mexicanus
ENSTRUG00000012888	hdlbpb	99	91.686	ENSCSEG00000000955	hdlbpb	98	91.686	Cynoglossus_semilaevis
ENSTRUG00000012888	hdlbpb	99	91.528	ENSCVAG00000005345	hdlbpb	98	93.060	Cyprinodon_variegatus
ENSTRUG00000012888	hdlbpb	99	82.805	ENSDARG00000061864	hdlbpb	98	82.805	Danio_rerio
ENSTRUG00000012888	hdlbpb	93	68.977	ENSEBUG00000005304	hdlbpb	97	68.808	Eptatretus_burgeri
ENSTRUG00000012888	hdlbpb	99	74.803	ENSELUG00000019925	hdlbpb	98	74.961	Esox_lucius
ENSTRUG00000012888	hdlbpb	87	34.428	ENSFHEG00000001701	hdlbpb	98	87.015	Fundulus_heteroclitus
ENSTRUG00000012888	hdlbpb	95	87.204	ENSGMOG00000004522	hdlbpb	73	87.204	Gadus_morhua
ENSTRUG00000012888	hdlbpb	99	91.924	ENSGAFG00000005278	hdlbpb	98	91.924	Gambusia_affinis
ENSTRUG00000012888	hdlbpb	99	88.678	ENSGACG00000019361	hdlbpb	98	88.915	Gasterosteus_aculeatus
ENSTRUG00000012888	hdlbpb	99	92.716	ENSHBUG00000018434	hdlbpb	98	92.795	Haplochromis_burtoni
ENSTRUG00000012888	hdlbpb	99	82.027	ENSIPUG00000003291	HDLBP	100	84.394	Ictalurus_punctatus
ENSTRUG00000012888	hdlbpb	99	92.162	ENSKMAG00000016562	hdlbpb	98	92.241	Kryptolebias_marmoratus
ENSTRUG00000012888	hdlbpb	99	92.716	ENSLBEG00000027855	hdlbpb	98	92.716	Labrus_bergylta
ENSTRUG00000012888	hdlbpb	99	72.326	ENSLACG00000007661	hdlbpb	97	69.069	Latimeria_chalumnae
ENSTRUG00000012888	hdlbpb	99	79.509	ENSLOCG00000013909	hdlbpb	98	79.509	Lepisosteus_oculatus
ENSTRUG00000012888	hdlbpb	99	93.112	ENSMAMG00000003035	hdlbpb	98	93.112	Mastacembelus_armatus
ENSTRUG00000012888	hdlbpb	99	92.795	ENSMZEG00005021465	hdlbpb	98	92.874	Maylandia_zebra
ENSTRUG00000012888	hdlbpb	99	91.766	ENSMMOG00000012525	hdlbpb	98	92.082	Mola_mola
ENSTRUG00000012888	hdlbpb	99	90.736	ENSMALG00000008938	hdlbpb	98	90.736	Monopterus_albus
ENSTRUG00000012888	hdlbpb	99	92.795	ENSNBRG00000002236	hdlbpb	98	92.874	Neolamprologus_brichardi
ENSTRUG00000012888	hdlbpb	99	92.637	ENSONIG00000009211	hdlbpb	98	92.716	Oreochromis_niloticus
ENSTRUG00000012888	hdlbpb	99	91.291	ENSORLG00000006581	hdlbpb	98	91.291	Oryzias_latipes
ENSTRUG00000012888	hdlbpb	99	91.528	ENSORLG00020010012	hdlbpb	98	91.528	Oryzias_latipes_hni
ENSTRUG00000012888	hdlbpb	99	91.607	ENSORLG00015006863	hdlbpb	98	91.607	Oryzias_latipes_hsok
ENSTRUG00000012888	hdlbpb	99	91.766	ENSOMEG00000011131	hdlbpb	99	91.766	Oryzias_melastigma
ENSTRUG00000012888	hdlbpb	99	85.273	ENSPKIG00000005966	hdlbpb	98	85.432	Paramormyrops_kingsleyae
ENSTRUG00000012888	hdlbpb	93	92.500	ENSPMGG00000019853	hdlbpb	99	92.500	Periophthalmus_magnuspinnatus
ENSTRUG00000012888	hdlbpb	95	74.918	ENSPMAG00000002131	hdlbpb	100	74.918	Petromyzon_marinus
ENSTRUG00000012888	hdlbpb	91	58.249	ENSPMAG00000000249	-	89	57.655	Petromyzon_marinus
ENSTRUG00000012888	hdlbpb	99	91.151	ENSPFOG00000008755	hdlbpb	98	91.151	Poecilia_formosa
ENSTRUG00000012888	hdlbpb	99	92.082	ENSPLAG00000007055	hdlbpb	98	92.082	Poecilia_latipinna
ENSTRUG00000012888	hdlbpb	99	92.003	ENSPMEG00000001952	hdlbpb	98	92.003	Poecilia_mexicana
ENSTRUG00000012888	hdlbpb	99	92.009	ENSPREG00000012848	hdlbpb	98	92.003	Poecilia_reticulata
ENSTRUG00000012888	hdlbpb	99	92.733	ENSPNYG00000022467	hdlbpb	99	92.812	Pundamilia_nyererei
ENSTRUG00000012888	hdlbpb	99	83.769	ENSPNAG00000011104	hdlbpb	98	83.769	Pygocentrus_nattereri
ENSTRUG00000012888	hdlbpb	99	84.901	ENSSFOG00015023199	hdlbpb	98	84.949	Scleropages_formosus
ENSTRUG00000012888	hdlbpb	99	92.795	ENSSMAG00000008790	hdlbpb	98	92.795	Scophthalmus_maximus
ENSTRUG00000012888	hdlbpb	99	93.032	ENSSDUG00000020694	hdlbpb	98	93.112	Seriola_dumerili
ENSTRUG00000012888	hdlbpb	99	92.552	ENSSLDG00000020807	hdlbpb	98	92.631	Seriola_lalandi_dorsalis
ENSTRUG00000012888	hdlbpb	99	80.048	ENSSPUG00000018688	-	98	80.048	Sphenodon_punctatus
ENSTRUG00000012888	hdlbpb	99	93.349	ENSSPAG00000016969	hdlbpb	98	93.349	Stegastes_partitus
ENSTRUG00000012888	hdlbpb	99	94.575	ENSTNIG00000002555	hdlbpb	98	94.575	Tetraodon_nigroviridis
ENSTRUG00000012888	hdlbpb	99	82.557	ENSXCOG00000001797	hdlbpb	97	82.557	Xiphophorus_couchianus
ENSTRUG00000012888	hdlbpb	99	91.449	ENSXMAG00000015633	hdlbpb	98	91.449	Xiphophorus_maculatus