EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000013035 (Gene tree)
Gene ID: 101074786
Gene Symbol: -
Alias: -
Full Name: ADP ribosylation factor like GTPase 13B
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 6617 bases
Position: chr8:5254263-5260879
Accession: 101074786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000033080	MMR_HSR1	PF01926.23	2.4e-06	1	1
ENSTRUP00000033079	MMR_HSR1	PF01926.23	5.1e-06	1	1
ENSTRUP00000033077	MMR_HSR1	PF01926.23	5.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000033203	-	3588	XM_003966552	ENSTRUP00000033077	426 (aa)	XP_003966601	H2U811
ENSTRUT00000033205	-	3111	-	ENSTRUP00000033079	422 (aa)	-	H2U813
ENSTRUT00000033206	-	774	-	ENSTRUP00000033080	257 (aa)	-	H2U814

Gene Model

Click here to download ENSTRUG00000013035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000013035's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000013035	-	64	30.952	ENSTRUG00000023169	arl8ba	88	30.952
ENSTRUG00000013035	-	79	30.841	ENSTRUG00000003716	-	87	30.841
ENSTRUG00000013035	-	67	33.149	ENSTRUG00000023908	sar1b	88	33.149
ENSTRUG00000013035	-	63	30.061	ENSTRUG00000020453	arl8	86	30.061
ENSTRUG00000013035	-	81	100.000	ENSTRUG00000003641	arl13b	80	100.000
ENSTRUG00000013035	-	52	33.333	ENSTRUG00000003085	arl4cb	72	33.333
ENSTRUG00000013035	-	68	32.778	ENSTRUG00000017239	ARL6	92	32.778
ENSTRUG00000013035	-	66	31.977	ENSTRUG00000011561	arl11	95	31.977
ENSTRUG00000013035	-	69	32.584	ENSTRUG00000018668	-	85	32.584
ENSTRUG00000013035	-	52	33.582	ENSTRUG00000014380	-	90	30.233
ENSTRUG00000013035	-	64	32.121	ENSTRUG00000014614	arl5a	87	32.121
ENSTRUG00000013035	-	70	31.383	ENSTRUG00000024375	-	86	31.383
ENSTRUG00000013035	-	58	33.784	ENSTRUG00000019870	-	98	30.108
ENSTRUG00000013035	-	70	35.196	ENSTRUG00000005435	arl2	92	35.196
ENSTRUG00000013035	-	52	33.094	ENSTRUG00000003183	-	72	33.094
ENSTRUG00000013035	-	50	33.333	ENSTRUG00000024749	-	92	33.333
ENSTRUG00000013035	-	67	34.066	ENSTRUG00000007269	sar1ab	89	34.066
ENSTRUG00000013035	-	58	32.432	ENSTRUG00000023041	-	82	32.432
ENSTRUG00000013035	-	67	34.104	ENSTRUG00000004035	arl3l2	87	34.302
ENSTRUG00000013035	-	64	32.738	ENSTRUG00000011496	arl8bb	88	32.738
ENSTRUG00000013035	-	67	31.214	ENSTRUG00000006254	arl1	90	31.214
ENSTRUG00000013035	-	50	34.328	ENSTRUG00000008027	arl4aa	68	34.328
ENSTRUG00000013035	-	65	34.524	ENSTRUG00000025462	-	89	34.524
ENSTRUG00000013035	-	64	32.143	ENSTRUG00000013912	arl8a	88	32.143
ENSTRUG00000013035	-	58	31.544	ENSTRUG00000022814	arl5c	82	31.544
ENSTRUG00000013035	-	52	33.083	ENSTRUG00000020509	-	69	33.083
ENSTRUG00000013035	-	73	35.106	ENSTRUG00000018107	arl3	98	35.106
ENSTRUG00000013035	-	50	34.884	ENSTRUG00000025171	-	80	34.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000013035	-	84	71.429	ENSAPOG00000013256	arl13b	99	55.022	Acanthochromis_polyacanthus
ENSTRUG00000013035	-	84	70.968	ENSACIG00000017582	arl13b	96	70.815	Amphilophus_citrinellus
ENSTRUG00000013035	-	99	57.773	ENSAOCG00000002828	arl13b	99	58.161	Amphiprion_ocellaris
ENSTRUG00000013035	-	84	71.429	ENSAPEG00000014654	arl13b	93	57.213	Amphiprion_percula
ENSTRUG00000013035	-	78	72.139	ENSATEG00000017586	arl13b	97	54.920	Anabas_testudineus
ENSTRUG00000013035	-	86	67.273	ENSACAG00000000523	ARL13B	99	49.649	Anolis_carolinensis
ENSTRUG00000013035	-	84	70.507	ENSACLG00000024227	arl13b	92	70.776	Astatotilapia_calliptera
ENSTRUG00000013035	-	88	71.239	ENSAMXG00000042824	arl13b	100	53.201	Astyanax_mexicanus
ENSTRUG00000013035	-	86	64.545	ENSCAPG00000006764	ARL13B	60	64.545	Cavia_aperea
ENSTRUG00000013035	-	84	66.047	ENSCPOG00000002558	ARL13B	81	65.728	Cavia_porcellus
ENSTRUG00000013035	-	82	67.619	ENSCLAG00000006379	ARL13B	99	46.528	Chinchilla_lanigera
ENSTRUG00000013035	-	87	67.265	ENSCPBG00000005599	ARL13B	100	51.276	Chrysemys_picta_bellii
ENSTRUG00000013035	-	89	73.043	ENSCSEG00000005258	arl13b	99	51.304	Cynoglossus_semilaevis
ENSTRUG00000013035	-	84	71.429	ENSCVAG00000001545	arl13b	91	72.489	Cyprinodon_variegatus
ENSTRUG00000013035	-	84	70.046	ENSDARG00000012763	arl13b	90	70.168	Danio_rerio
ENSTRUG00000013035	-	90	51.515	ENSEBUG00000006528	arl13b	85	51.982	Eptatretus_burgeri
ENSTRUG00000013035	-	91	66.524	ENSEEUG00000010823	ARL13B	70	58.940	Erinaceus_europaeus
ENSTRUG00000013035	-	84	65.278	ENSFALG00000001654	ARL13B	99	49.184	Ficedula_albicollis
ENSTRUG00000013035	-	87	68.304	ENSFDAG00000006556	ARL13B	100	49.227	Fukomys_damarensis
ENSTRUG00000013035	-	84	70.968	ENSFHEG00000016049	arl13b	92	56.858	Fundulus_heteroclitus
ENSTRUG00000013035	-	80	69.756	ENSGMOG00000018628	arl13b	89	59.032	Gadus_morhua
ENSTRUG00000013035	-	89	73.043	ENSGAFG00000000025	arl13b	86	73.043	Gambusia_affinis
ENSTRUG00000013035	-	89	70.306	ENSGACG00000014228	arl13b	99	54.989	Gasterosteus_aculeatus
ENSTRUG00000013035	-	88	66.814	ENSGAGG00000019336	ARL13B	100	50.465	Gopherus_agassizii
ENSTRUG00000013035	-	84	70.507	ENSHBUG00000020619	arl13b	100	53.642	Haplochromis_burtoni
ENSTRUG00000013035	-	84	71.889	ENSHCOG00000006106	arl13b	92	57.855	Hippocampus_comes
ENSTRUG00000013035	-	84	72.350	ENSKMAG00000001122	arl13b	99	55.778	Kryptolebias_marmoratus
ENSTRUG00000013035	-	87	72.646	ENSLBEG00000014612	arl13b	99	57.639	Labrus_bergylta
ENSTRUG00000013035	-	83	72.430	ENSLOCG00000010465	arl13b	100	52.412	Lepisosteus_oculatus
ENSTRUG00000013035	-	87	73.543	ENSMAMG00000021452	arl13b	100	58.525	Mastacembelus_armatus
ENSTRUG00000013035	-	84	70.507	ENSMZEG00005017827	arl13b	100	53.422	Maylandia_zebra
ENSTRUG00000013035	-	93	70.545	ENSMMOG00000010253	arl13b	99	47.111	Mola_mola
ENSTRUG00000013035	-	89	72.052	ENSMALG00000014655	arl13b	81	71.364	Monopterus_albus
ENSTRUG00000013035	-	86	67.727	MGP_CAROLIEiJ_G0020856	Arl13b	100	48.344	Mus_caroli
ENSTRUG00000013035	-	86	67.727	ENSMUSG00000022911	Arl13b	100	48.124	Mus_musculus
ENSTRUG00000013035	-	86	67.727	MGP_PahariEiJ_G0016561	Arl13b	100	48.124	Mus_pahari
ENSTRUG00000013035	-	86	67.727	MGP_SPRETEiJ_G0021763	Arl13b	100	48.565	Mus_spretus
ENSTRUG00000013035	-	80	66.829	ENSMLUG00000017473	ARL13B	96	47.696	Myotis_lucifugus
ENSTRUG00000013035	-	89	71.739	ENSNBRG00000004078	arl13b	92	71.739	Neolamprologus_brichardi
ENSTRUG00000013035	-	94	63.636	ENSNLEG00000001772	ARL13B	100	48.678	Nomascus_leucogenys
ENSTRUG00000013035	-	82	62.381	ENSMEUG00000008036	-	60	59.592	Notamacropus_eugenii
ENSTRUG00000013035	-	90	67.965	ENSODEG00000011381	ARL13B	100	48.690	Octodon_degus
ENSTRUG00000013035	-	84	70.507	ENSONIG00000001864	arl13b	100	54.066	Oreochromis_niloticus
ENSTRUG00000013035	-	89	71.161	ENSORLG00000006350	arl13b	91	72.926	Oryzias_latipes
ENSTRUG00000013035	-	91	69.708	ENSORLG00020013754	arl13b	99	53.437	Oryzias_latipes_hni
ENSTRUG00000013035	-	84	71.889	ENSORLG00015012586	arl13b	99	52.222	Oryzias_latipes_hsok
ENSTRUG00000013035	-	84	70.507	ENSOMEG00000010187	arl13b	89	71.616	Oryzias_melastigma
ENSTRUG00000013035	-	90	66.667	ENSPSIG00000018115	ARL13B	94	49.148	Pelodiscus_sinensis
ENSTRUG00000013035	-	84	74.194	ENSPMGG00000004584	arl13b	99	54.425	Periophthalmus_magnuspinnatus
ENSTRUG00000013035	-	87	58.036	ENSPCIG00000026984	ARL13B	86	44.363	Phascolarctos_cinereus
ENSTRUG00000013035	-	84	71.429	ENSPFOG00000005379	arl13b	100	52.550	Poecilia_formosa
ENSTRUG00000013035	-	84	70.968	ENSPLAG00000008699	arl13b	92	54.613	Poecilia_latipinna
ENSTRUG00000013035	-	79	69.951	ENSPMEG00000015387	arl13b	99	51.843	Poecilia_mexicana
ENSTRUG00000013035	-	84	71.429	ENSPREG00000006291	arl13b	100	52.434	Poecilia_reticulata
ENSTRUG00000013035	-	77	70.707	ENSPNYG00000022879	arl13b	98	43.750	Pundamilia_nyererei
ENSTRUG00000013035	-	84	70.968	ENSPNAG00000003803	arl13b	100	52.539	Pygocentrus_nattereri
ENSTRUG00000013035	-	91	62.288	ENSSFOG00015005491	arl13b	92	62.288	Scleropages_formosus
ENSTRUG00000013035	-	83	64.186	ENSSFOG00015023057	arl13b	84	64.186	Scleropages_formosus
ENSTRUG00000013035	-	99	56.177	ENSSMAG00000015450	arl13b	99	57.077	Scophthalmus_maximus
ENSTRUG00000013035	-	84	71.889	ENSSDUG00000005560	arl13b	90	59.459	Seriola_dumerili
ENSTRUG00000013035	-	84	71.889	ENSSLDG00000013361	arl13b	93	59.459	Seriola_lalandi_dorsalis
ENSTRUG00000013035	-	86	68.468	ENSSARG00000003872	ARL13B	99	50.000	Sorex_araneus
ENSTRUG00000013035	-	89	68.996	ENSSPUG00000006649	ARL13B	93	68.996	Sphenodon_punctatus
ENSTRUG00000013035	-	84	71.429	ENSSPAG00000016442	arl13b	83	57.673	Stegastes_partitus
ENSTRUG00000013035	-	89	66.376	ENSTGUG00000013493	ARL13B	100	48.352	Taeniopygia_guttata
ENSTRUG00000013035	-	87	66.518	ENSVVUG00000021511	ARL13B	100	50.115	Vulpes_vulpes
ENSTRUG00000013035	-	94	65.289	ENSXETG00000032383	ARL13B	96	65.789	Xenopus_tropicalis
ENSTRUG00000013035	-	81	43.128	ENSXETG00000026166	arl13a	50	43.128	Xenopus_tropicalis
ENSTRUG00000013035	-	98	65.993	ENSXCOG00000016955	arl13b	86	63.208	Xiphophorus_couchianus
ENSTRUG00000013035	-	84	71.429	ENSXMAG00000002089	arl13b	99	53.139	Xiphophorus_maculatus