EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000013173 (Gene tree)
Gene ID: 101065351
Gene Symbol: rbm8a
Alias: fb34f03|wu:fb34f03|zgc:110525
Full Name: RNA binding motif protein 8A
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 2479 bases
Position: chr7:1651784-1654262
Accession: 101065351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000049753	RRM_1	PF00076.22	1.1e-19	1	1
ENSTRUP00000033509	RRM_1	PF00076.22	2e-19	1	1
ENSTRUP00000049753	RRM_3	PF08777.11	9.4e-06	1	1
ENSTRUP00000033509	RRM_3	PF08777.11	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000054457	-	1522	-	ENSTRUP00000049753	168 (aa)	-	-
ENSTRUT00000033635	-	1116	XM_003965643	ENSTRUP00000033509	173 (aa)	XP_003965692	H2U993

Gene Model

Click here to download ENSTRUG00000013173's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03013	RNA transport	KEGG
tru03015	mRNA surveillance pathway	KEGG
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000013173's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000013173	rbm8a	79	34.884	ENSTRUG00000023704	elavl1a	50	34.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000013173	rbm8a	86	89.404	ENSG00000265241	RBM8A	91	89.241	Homo_sapiens
ENSTRUG00000013173	rbm8a	100	96.000	ENSAPOG00000009727	rbm8a	100	96.000	Acanthochromis_polyacanthus
ENSTRUG00000013173	rbm8a	86	87.662	ENSAMEG00000017623	RBM8A	91	87.578	Ailuropoda_melanoleuca
ENSTRUG00000013173	rbm8a	91	95.625	ENSACIG00000017678	rbm8a	100	95.625	Amphilophus_citrinellus
ENSTRUG00000013173	rbm8a	100	96.000	ENSAOCG00000023887	rbm8a	85	96.000	Amphiprion_ocellaris
ENSTRUG00000013173	rbm8a	100	96.000	ENSAPEG00000022847	rbm8a	85	96.000	Amphiprion_percula
ENSTRUG00000013173	rbm8a	100	96.000	ENSATEG00000005630	rbm8a	100	96.000	Anabas_testudineus
ENSTRUG00000013173	rbm8a	86	89.404	ENSANAG00000004525	RBM8A	91	89.241	Aotus_nancymaae
ENSTRUG00000013173	rbm8a	100	96.000	ENSACLG00000009627	rbm8a	100	96.000	Astatotilapia_calliptera
ENSTRUG00000013173	rbm8a	86	94.040	ENSAMXG00000040754	rbm8a	91	93.671	Astyanax_mexicanus
ENSTRUG00000013173	rbm8a	80	54.412	WBGene00004387	rnp-4	83	57.851	Caenorhabditis_elegans
ENSTRUG00000013173	rbm8a	86	89.404	ENSCJAG00000046869	RBM8A	91	89.241	Callithrix_jacchus
ENSTRUG00000013173	rbm8a	86	89.404	ENSCAFG00000023172	RBM8A	91	89.241	Canis_familiaris
ENSTRUG00000013173	rbm8a	86	89.404	ENSCAFG00020019945	RBM8A	91	89.241	Canis_lupus_dingo
ENSTRUG00000013173	rbm8a	86	89.404	ENSCHIG00000012114	RBM8A	91	89.241	Capra_hircus
ENSTRUG00000013173	rbm8a	86	89.404	ENSTSYG00000028809	RBM8A	91	89.241	Carlito_syrichta
ENSTRUG00000013173	rbm8a	65	90.000	ENSCAPG00000014086	RBM8A	89	89.908	Cavia_aperea
ENSTRUG00000013173	rbm8a	90	89.241	ENSCPOG00000022453	RBM8A	94	89.241	Cavia_porcellus
ENSTRUG00000013173	rbm8a	86	88.742	ENSCCAG00000022460	-	91	88.608	Cebus_capucinus
ENSTRUG00000013173	rbm8a	86	89.404	ENSCCAG00000028589	-	91	89.241	Cebus_capucinus
ENSTRUG00000013173	rbm8a	86	89.404	ENSCATG00000021691	RBM8A	91	89.241	Cercocebus_atys
ENSTRUG00000013173	rbm8a	86	89.404	ENSCLAG00000000547	RBM8A	91	89.241	Chinchilla_lanigera
ENSTRUG00000013173	rbm8a	86	89.404	ENSCSAG00000001779	RBM8A	91	89.241	Chlorocebus_sabaeus
ENSTRUG00000013173	rbm8a	86	90.066	ENSCPBG00000007941	RBM8A	73	89.873	Chrysemys_picta_bellii
ENSTRUG00000013173	rbm8a	90	63.462	ENSCING00000004877	-	93	63.462	Ciona_intestinalis
ENSTRUG00000013173	rbm8a	88	63.399	ENSCSAVG00000005685	-	93	62.821	Ciona_savignyi
ENSTRUG00000013173	rbm8a	86	89.404	ENSCANG00000042182	RBM8A	91	89.241	Colobus_angolensis_palliatus
ENSTRUG00000013173	rbm8a	86	89.404	ENSCGRG00001002681	-	91	89.241	Cricetulus_griseus_chok1gshd
ENSTRUG00000013173	rbm8a	88	74.839	ENSCGRG00001003032	-	91	74.684	Cricetulus_griseus_chok1gshd
ENSTRUG00000013173	rbm8a	86	89.404	ENSCGRG00000006832	-	91	89.241	Cricetulus_griseus_crigri
ENSTRUG00000013173	rbm8a	100	96.571	ENSCSEG00000011865	rbm8a	100	96.571	Cynoglossus_semilaevis
ENSTRUG00000013173	rbm8a	90	94.872	ENSCVAG00000020734	rbm8a	90	94.872	Cyprinodon_variegatus
ENSTRUG00000013173	rbm8a	88	93.548	ENSDARG00000016516	rbm8a	91	93.038	Danio_rerio
ENSTRUG00000013173	rbm8a	54	83.516	ENSDNOG00000025265	-	100	83.516	Dasypus_novemcinctus
ENSTRUG00000013173	rbm8a	86	89.404	ENSDORG00000027340	-	99	82.840	Dipodomys_ordii
ENSTRUG00000013173	rbm8a	94	58.929	FBgn0033378	tsu	96	60.248	Drosophila_melanogaster
ENSTRUG00000013173	rbm8a	88	75.484	ENSETEG00000017932	-	91	75.316	Echinops_telfairi
ENSTRUG00000013173	rbm8a	81	83.916	ENSETEG00000008411	-	81	83.916	Echinops_telfairi
ENSTRUG00000013173	rbm8a	90	80.255	ENSEBUG00000010386	rbm8a	90	80.255	Eptatretus_burgeri
ENSTRUG00000013173	rbm8a	86	89.404	ENSEASG00005007455	RBM8A	91	89.241	Equus_asinus_asinus
ENSTRUG00000013173	rbm8a	86	89.404	ENSECAG00000022024	RBM8A	91	89.241	Equus_caballus
ENSTRUG00000013173	rbm8a	86	61.589	ENSEEUG00000008823	RBM8A	91	62.658	Erinaceus_europaeus
ENSTRUG00000013173	rbm8a	88	94.194	ENSELUG00000012464	rbm8a	90	93.671	Esox_lucius
ENSTRUG00000013173	rbm8a	86	88.742	ENSFCAG00000033936	RBM8A	91	88.608	Felis_catus
ENSTRUG00000013173	rbm8a	86	89.404	ENSFDAG00000020821	RBM8A	91	89.241	Fukomys_damarensis
ENSTRUG00000013173	rbm8a	90	95.513	ENSFHEG00000013538	rbm8a	90	95.513	Fundulus_heteroclitus
ENSTRUG00000013173	rbm8a	81	93.571	ENSGMOG00000007353	rbm8a	89	93.571	Gadus_morhua
ENSTRUG00000013173	rbm8a	86	77.181	ENSGALG00000036283	RBM8A	90	77.564	Gallus_gallus
ENSTRUG00000013173	rbm8a	90	94.937	ENSGAFG00000021698	rbm8a	90	94.937	Gambusia_affinis
ENSTRUG00000013173	rbm8a	91	97.452	ENSGACG00000013157	rbm8a	100	97.452	Gasterosteus_aculeatus
ENSTRUG00000013173	rbm8a	86	90.066	ENSGAGG00000023769	RBM8A	91	89.873	Gopherus_agassizii
ENSTRUG00000013173	rbm8a	86	89.404	ENSGGOG00000037248	RBM8A	91	89.241	Gorilla_gorilla
ENSTRUG00000013173	rbm8a	91	96.250	ENSHBUG00000008827	rbm8a	100	96.250	Haplochromis_burtoni
ENSTRUG00000013173	rbm8a	86	89.404	ENSHGLG00000007303	RBM8A	91	89.241	Heterocephalus_glaber_female
ENSTRUG00000013173	rbm8a	86	89.404	ENSHGLG00100012468	RBM8A	91	89.241	Heterocephalus_glaber_male
ENSTRUG00000013173	rbm8a	91	96.078	ENSHCOG00000010122	rbm8a	90	95.513	Hippocampus_comes
ENSTRUG00000013173	rbm8a	88	91.613	ENSIPUG00000006525	rbm8a	81	91.139	Ictalurus_punctatus
ENSTRUG00000013173	rbm8a	86	88.742	ENSSTOG00000013917	RBM8A	91	88.608	Ictidomys_tridecemlineatus
ENSTRUG00000013173	rbm8a	86	89.404	ENSJJAG00000009488	-	91	89.241	Jaculus_jaculus
ENSTRUG00000013173	rbm8a	90	93.671	ENSKMAG00000014454	rbm8a	90	93.671	Kryptolebias_marmoratus
ENSTRUG00000013173	rbm8a	100	96.000	ENSLBEG00000015720	rbm8a	100	96.000	Labrus_bergylta
ENSTRUG00000013173	rbm8a	88	89.809	ENSLACG00000014365	RBM8A	91	89.375	Latimeria_chalumnae
ENSTRUG00000013173	rbm8a	88	94.194	ENSLOCG00000009082	rbm8a	91	93.671	Lepisosteus_oculatus
ENSTRUG00000013173	rbm8a	88	89.677	ENSLAFG00000021886	-	91	89.241	Loxodonta_africana
ENSTRUG00000013173	rbm8a	99	64.045	ENSLAFG00000011031	-	91	63.354	Loxodonta_africana
ENSTRUG00000013173	rbm8a	86	89.404	ENSMFAG00000045376	RBM8A	91	89.241	Macaca_fascicularis
ENSTRUG00000013173	rbm8a	91	85.030	ENSMMUG00000016051	RBM8A	99	84.848	Macaca_mulatta
ENSTRUG00000013173	rbm8a	86	89.404	ENSMNEG00000040422	RBM8A	91	89.241	Macaca_nemestrina
ENSTRUG00000013173	rbm8a	86	89.404	ENSMLEG00000039155	RBM8A	91	89.241	Mandrillus_leucophaeus
ENSTRUG00000013173	rbm8a	90	94.937	ENSMAMG00000010565	rbm8a	90	94.937	Mastacembelus_armatus
ENSTRUG00000013173	rbm8a	100	96.000	ENSMZEG00005016453	rbm8a	100	96.000	Maylandia_zebra
ENSTRUG00000013173	rbm8a	86	89.404	ENSMAUG00000016783	-	99	83.333	Mesocricetus_auratus
ENSTRUG00000013173	rbm8a	86	89.404	ENSMICG00000031698	-	91	89.241	Microcebus_murinus
ENSTRUG00000013173	rbm8a	91	72.500	ENSMICG00000037163	-	97	72.611	Microcebus_murinus
ENSTRUG00000013173	rbm8a	86	89.404	ENSMOCG00000017782	-	91	89.241	Microtus_ochrogaster
ENSTRUG00000013173	rbm8a	91	87.013	ENSMMOG00000017179	rbm8a	97	86.842	Mola_mola
ENSTRUG00000013173	rbm8a	86	90.066	ENSMODG00000018752	RBM8A	91	89.873	Monodelphis_domestica
ENSTRUG00000013173	rbm8a	90	93.038	ENSMALG00000010145	rbm8a	90	93.038	Monopterus_albus
ENSTRUG00000013173	rbm8a	86	89.404	MGP_CAROLIEiJ_G0025383	Rbm8a	99	82.840	Mus_caroli
ENSTRUG00000013173	rbm8a	86	86.755	MGP_CAROLIEiJ_G0014951	Rbm8a2	91	86.709	Mus_caroli
ENSTRUG00000013173	rbm8a	86	87.417	ENSMUSG00000078184	Rbm8a2	91	87.342	Mus_musculus
ENSTRUG00000013173	rbm8a	86	89.404	ENSMUSG00000038374	Rbm8a	99	82.840	Mus_musculus
ENSTRUG00000013173	rbm8a	86	89.404	MGP_PahariEiJ_G0026828	-	99	82.840	Mus_pahari
ENSTRUG00000013173	rbm8a	86	89.404	MGP_SPRETEiJ_G0026330	Rbm8a	99	82.840	Mus_spretus
ENSTRUG00000013173	rbm8a	86	89.404	ENSMPUG00000000775	RBM8A	91	89.241	Mustela_putorius_furo
ENSTRUG00000013173	rbm8a	86	83.221	ENSMLUG00000022711	-	90	83.333	Myotis_lucifugus
ENSTRUG00000013173	rbm8a	86	89.404	ENSMLUG00000017436	-	91	89.241	Myotis_lucifugus
ENSTRUG00000013173	rbm8a	88	89.677	ENSNGAG00000016038	-	91	89.241	Nannospalax_galili
ENSTRUG00000013173	rbm8a	100	96.000	ENSNBRG00000004541	rbm8a	100	96.000	Neolamprologus_brichardi
ENSTRUG00000013173	rbm8a	86	89.404	ENSNLEG00000029632	RBM8A	91	89.241	Nomascus_leucogenys
ENSTRUG00000013173	rbm8a	64	91.667	ENSMEUG00000016058	RBM8A	88	91.304	Notamacropus_eugenii
ENSTRUG00000013173	rbm8a	65	88.596	ENSOPRG00000013316	RBM8A	100	88.596	Ochotona_princeps
ENSTRUG00000013173	rbm8a	86	89.404	ENSODEG00000000114	-	91	89.241	Octodon_degus
ENSTRUG00000013173	rbm8a	86	78.146	ENSODEG00000008563	-	90	78.481	Octodon_degus
ENSTRUG00000013173	rbm8a	86	76.159	ENSODEG00000002094	-	90	76.582	Octodon_degus
ENSTRUG00000013173	rbm8a	100	96.000	ENSONIG00000008608	rbm8a	100	96.000	Oreochromis_niloticus
ENSTRUG00000013173	rbm8a	86	87.662	ENSOCUG00000025693	RBM8A	91	87.578	Oryctolagus_cuniculus
ENSTRUG00000013173	rbm8a	90	93.038	ENSORLG00000016263	rbm8a	90	93.038	Oryzias_latipes
ENSTRUG00000013173	rbm8a	91	93.125	ENSORLG00020012904	rbm8a	84	93.038	Oryzias_latipes_hni
ENSTRUG00000013173	rbm8a	90	93.038	ENSORLG00015018824	rbm8a	90	93.038	Oryzias_latipes_hsok
ENSTRUG00000013173	rbm8a	90	93.671	ENSOMEG00000021533	rbm8a	71	93.671	Oryzias_melastigma
ENSTRUG00000013173	rbm8a	86	87.662	ENSOGAG00000000202	RBM8A	91	87.578	Otolemur_garnettii
ENSTRUG00000013173	rbm8a	86	88.742	ENSOARG00000020634	RBM8A	91	88.608	Ovis_aries
ENSTRUG00000013173	rbm8a	86	89.404	ENSPPAG00000029116	RBM8A	91	89.241	Pan_paniscus
ENSTRUG00000013173	rbm8a	86	88.742	ENSPPRG00000008243	RBM8A	91	88.608	Panthera_pardus
ENSTRUG00000013173	rbm8a	86	89.404	ENSPTIG00000009472	RBM8A	91	89.241	Panthera_tigris_altaica
ENSTRUG00000013173	rbm8a	86	89.404	ENSPTRG00000001201	RBM8A	91	89.241	Pan_troglodytes
ENSTRUG00000013173	rbm8a	86	89.404	ENSPANG00000020584	RBM8A	91	89.241	Papio_anubis
ENSTRUG00000013173	rbm8a	90	91.720	ENSPKIG00000009551	rbm8a	67	91.139	Paramormyrops_kingsleyae
ENSTRUG00000013173	rbm8a	88	92.810	ENSPKIG00000020558	rbm8a	91	92.308	Paramormyrops_kingsleyae
ENSTRUG00000013173	rbm8a	100	96.571	ENSPMGG00000010122	rbm8a	100	96.571	Periophthalmus_magnuspinnatus
ENSTRUG00000013173	rbm8a	86	89.404	ENSPEMG00000018117	-	91	89.241	Peromyscus_maniculatus_bairdii
ENSTRUG00000013173	rbm8a	86	90.066	ENSPCIG00000011931	RBM8A	91	89.873	Phascolarctos_cinereus
ENSTRUG00000013173	rbm8a	90	94.304	ENSPFOG00000010695	rbm8a	90	94.304	Poecilia_formosa
ENSTRUG00000013173	rbm8a	90	94.304	ENSPLAG00000009183	rbm8a	90	94.304	Poecilia_latipinna
ENSTRUG00000013173	rbm8a	90	94.304	ENSPMEG00000013950	rbm8a	90	94.304	Poecilia_mexicana
ENSTRUG00000013173	rbm8a	91	95.000	ENSPREG00000017572	rbm8a	100	95.000	Poecilia_reticulata
ENSTRUG00000013173	rbm8a	86	89.404	ENSPPYG00000000929	RBM8A	91	89.241	Pongo_abelii
ENSTRUG00000013173	rbm8a	88	89.032	ENSPCAG00000002146	-	91	88.608	Procavia_capensis
ENSTRUG00000013173	rbm8a	86	89.404	ENSPCOG00000022886	RBM8A	91	89.241	Propithecus_coquereli
ENSTRUG00000013173	rbm8a	86	89.404	ENSPVAG00000014471	RBM8A	91	89.241	Pteropus_vampyrus
ENSTRUG00000013173	rbm8a	100	96.000	ENSPNYG00000013564	rbm8a	100	96.000	Pundamilia_nyererei
ENSTRUG00000013173	rbm8a	91	95.425	ENSPNAG00000028502	rbm8a	91	94.937	Pygocentrus_nattereri
ENSTRUG00000013173	rbm8a	86	89.404	ENSRNOG00000021215	Rbm8a	91	89.241	Rattus_norvegicus
ENSTRUG00000013173	rbm8a	86	88.742	ENSRBIG00000039233	RBM8A	91	88.608	Rhinopithecus_bieti
ENSTRUG00000013173	rbm8a	86	89.404	ENSRROG00000040324	-	91	89.241	Rhinopithecus_roxellana
ENSTRUG00000013173	rbm8a	86	84.106	ENSRROG00000033023	-	91	83.544	Rhinopithecus_roxellana
ENSTRUG00000013173	rbm8a	86	89.404	ENSSBOG00000031316	RBM8A	91	89.241	Saimiri_boliviensis_boliviensis
ENSTRUG00000013173	rbm8a	86	90.066	ENSSHAG00000018629	RBM8A	91	89.873	Sarcophilus_harrisii
ENSTRUG00000013173	rbm8a	88	93.548	ENSSFOG00015009007	rbm8a	91	93.038	Scleropages_formosus
ENSTRUG00000013173	rbm8a	88	91.613	ENSSFOG00015024171	rbm8a	91	91.139	Scleropages_formosus
ENSTRUG00000013173	rbm8a	100	96.571	ENSSMAG00000012998	rbm8a	100	96.571	Scophthalmus_maximus
ENSTRUG00000013173	rbm8a	100	96.000	ENSSDUG00000005911	rbm8a	100	96.000	Seriola_dumerili
ENSTRUG00000013173	rbm8a	100	96.000	ENSSLDG00000011664	rbm8a	100	96.000	Seriola_lalandi_dorsalis
ENSTRUG00000013173	rbm8a	86	89.404	ENSSARG00000013289	RBM8A	91	89.241	Sorex_araneus
ENSTRUG00000013173	rbm8a	86	90.728	ENSSPUG00000001576	RBM8A	91	90.506	Sphenodon_punctatus
ENSTRUG00000013173	rbm8a	100	96.000	ENSSPAG00000012181	rbm8a	100	96.000	Stegastes_partitus
ENSTRUG00000013173	rbm8a	86	89.404	ENSSSCG00000028509	RBM8A	91	89.241	Sus_scrofa
ENSTRUG00000013173	rbm8a	86	87.417	ENSTGUG00000004447	RBM8A	91	87.342	Taeniopygia_guttata
ENSTRUG00000013173	rbm8a	90	95.570	ENSTNIG00000006869	rbm8a	90	95.570	Tetraodon_nigroviridis
ENSTRUG00000013173	rbm8a	65	88.596	ENSTBEG00000014947	RBM8A	100	88.596	Tupaia_belangeri
ENSTRUG00000013173	rbm8a	76	89.844	ENSTTRG00000009081	RBM8A	89	89.630	Tursiops_truncatus
ENSTRUG00000013173	rbm8a	86	89.404	ENSUAMG00000021929	RBM8A	91	89.241	Ursus_americanus
ENSTRUG00000013173	rbm8a	86	89.404	ENSUMAG00000010298	RBM8A	91	89.241	Ursus_maritimus
ENSTRUG00000013173	rbm8a	86	89.404	ENSVVUG00000007486	RBM8A	91	89.241	Vulpes_vulpes
ENSTRUG00000013173	rbm8a	90	94.937	ENSXCOG00000004369	rbm8a	90	94.937	Xiphophorus_couchianus
ENSTRUG00000013173	rbm8a	91	96.203	ENSXMAG00000013463	rbm8a	100	96.203	Xiphophorus_maculatus