EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000013239 (Gene tree)
Gene ID: 101065610
Gene Symbol: -
Alias: -
Full Name: PR domain zinc finger protein 12-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 3015 bases
Position: chr21:2397114-2400128
Accession: 101065610
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000033700	zf-C2H2	PF00096.26	2.5e-10	1	2
ENSTRUP00000033700	zf-C2H2	PF00096.26	2.5e-10	2	2
ENSTRUP00000033700	zf-met	PF12874.7	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000033826	-	1074	XM_003974619	ENSTRUP00000033700	357 (aa)	XP_003974668	H2U9T4

Gene Model

Click here to download ENSTRUG00000013239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000013239's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000013239	-	70	45.333	ENSTRUG00000006896	-	83	45.333
ENSTRUG00000013239	-	75	40.000	ENSTRUG00000013850	prdm5	96	40.000
ENSTRUG00000013239	-	100	78.226	ENSTRUG00000018659	prdm12b	100	79.301

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000013239	-	93	81.627	ENSG00000130711	PRDM12	99	74.866	Homo_sapiens
ENSTRUG00000013239	-	100	77.403	ENSAPOG00000016051	prdm12b	100	77.403	Acanthochromis_polyacanthus
ENSTRUG00000013239	-	100	73.224	ENSAPOG00000018234	-	100	73.224	Acanthochromis_polyacanthus
ENSTRUG00000013239	-	93	79.819	ENSAMEG00000016234	PRDM12	99	79.819	Ailuropoda_melanoleuca
ENSTRUG00000013239	-	100	84.960	ENSACIG00000005193	-	100	84.960	Amphilophus_citrinellus
ENSTRUG00000013239	-	100	78.571	ENSACIG00000019578	prdm12b	100	78.836	Amphilophus_citrinellus
ENSTRUG00000013239	-	100	77.953	ENSAOCG00000015040	prdm12b	100	77.953	Amphiprion_ocellaris
ENSTRUG00000013239	-	100	76.546	ENSAPEG00000022849	-	99	77.062	Amphiprion_percula
ENSTRUG00000013239	-	100	78.571	ENSAPEG00000015092	prdm12b	100	78.571	Amphiprion_percula
ENSTRUG00000013239	-	95	86.804	ENSATEG00000014595	-	99	86.804	Anabas_testudineus
ENSTRUG00000013239	-	93	81.627	ENSANAG00000020616	PRDM12	95	81.325	Aotus_nancymaae
ENSTRUG00000013239	-	100	80.506	ENSACLG00000007631	-	100	80.506	Astatotilapia_calliptera
ENSTRUG00000013239	-	100	76.694	ENSACLG00000011876	prdm12b	100	76.694	Astatotilapia_calliptera
ENSTRUG00000013239	-	100	78.049	ENSAMXG00000008540	PRDM12	100	78.049	Astyanax_mexicanus
ENSTRUG00000013239	-	100	79.088	ENSAMXG00000033665	prdm12b	100	79.088	Astyanax_mexicanus
ENSTRUG00000013239	-	93	81.627	ENSBTAG00000023797	PRDM12	99	76.087	Bos_taurus
ENSTRUG00000013239	-	93	81.627	ENSCJAG00000020540	PRDM12	99	76.294	Callithrix_jacchus
ENSTRUG00000013239	-	77	86.131	ENSCAFG00000023076	PRDM12	96	78.275	Canis_familiaris
ENSTRUG00000013239	-	93	81.627	ENSCAFG00020024046	PRDM12	99	75.472	Canis_lupus_dingo
ENSTRUG00000013239	-	93	81.627	ENSCHIG00000025005	PRDM12	99	75.610	Capra_hircus
ENSTRUG00000013239	-	94	77.151	ENSCPOG00000005901	PRDM12	98	77.151	Cavia_porcellus
ENSTRUG00000013239	-	93	81.627	ENSCCAG00000037485	PRDM12	99	75.676	Cebus_capucinus
ENSTRUG00000013239	-	93	81.627	ENSCATG00000020327	PRDM12	99	75.676	Cercocebus_atys
ENSTRUG00000013239	-	93	80.120	ENSCLAG00000005499	PRDM12	89	80.120	Chinchilla_lanigera
ENSTRUG00000013239	-	93	81.627	ENSCSAG00000014756	PRDM12	99	75.472	Chlorocebus_sabaeus
ENSTRUG00000013239	-	100	78.947	ENSCPBG00000022628	PRDM12	99	78.947	Chrysemys_picta_bellii
ENSTRUG00000013239	-	93	81.325	ENSCGRG00001015005	Prdm12	99	74.799	Cricetulus_griseus_chok1gshd
ENSTRUG00000013239	-	100	81.074	ENSCVAG00000000944	-	100	81.330	Cyprinodon_variegatus
ENSTRUG00000013239	-	100	77.540	ENSCVAG00000017166	prdm12b	100	78.075	Cyprinodon_variegatus
ENSTRUG00000013239	-	100	80.541	ENSDARG00000007430	prdm12b	100	80.541	Danio_rerio
ENSTRUG00000013239	-	93	81.081	ENSDNOG00000042302	PRDM12	99	75.610	Dasypus_novemcinctus
ENSTRUG00000013239	-	97	61.518	ENSEBUG00000016780	prdm12b	84	61.780	Eptatretus_burgeri
ENSTRUG00000013239	-	93	81.627	ENSEASG00005008472	PRDM12	99	75.881	Equus_asinus_asinus
ENSTRUG00000013239	-	93	81.627	ENSECAG00000005933	PRDM12	99	75.881	Equus_caballus
ENSTRUG00000013239	-	100	79.144	ENSELUG00000009905	prdm12b	100	79.144	Esox_lucius
ENSTRUG00000013239	-	100	75.000	ENSELUG00000013674	PRDM12	100	75.989	Esox_lucius
ENSTRUG00000013239	-	93	81.627	ENSFCAG00000043086	PRDM12	99	75.676	Felis_catus
ENSTRUG00000013239	-	100	79.501	ENSFALG00000001445	PRDM12	89	79.501	Ficedula_albicollis
ENSTRUG00000013239	-	100	77.867	ENSFHEG00000003944	prdm12b	100	78.400	Fundulus_heteroclitus
ENSTRUG00000013239	-	100	78.316	ENSFHEG00000007746	-	100	78.316	Fundulus_heteroclitus
ENSTRUG00000013239	-	93	84.084	ENSGMOG00000011797	prdm12b	100	77.249	Gadus_morhua
ENSTRUG00000013239	-	100	79.501	ENSGALG00000003895	PRDM12	99	79.501	Gallus_gallus
ENSTRUG00000013239	-	100	76.579	ENSGAFG00000010827	prdm12b	99	76.579	Gambusia_affinis
ENSTRUG00000013239	-	100	77.807	ENSGACG00000016713	prdm12b	99	77.540	Gasterosteus_aculeatus
ENSTRUG00000013239	-	100	79.224	ENSGAGG00000014083	PRDM12	99	79.224	Gopherus_agassizii
ENSTRUG00000013239	-	93	81.325	ENSGGOG00000010568	PRDM12	99	74.799	Gorilla_gorilla
ENSTRUG00000013239	-	100	80.506	ENSHBUG00000022537	-	93	80.506	Haplochromis_burtoni
ENSTRUG00000013239	-	100	78.133	ENSHBUG00000022878	prdm12b	100	78.133	Haplochromis_burtoni
ENSTRUG00000013239	-	93	81.024	ENSHGLG00000013939	PRDM12	99	74.731	Heterocephalus_glaber_female
ENSTRUG00000013239	-	93	78.198	ENSHCOG00000003663	prdm12b	100	72.081	Hippocampus_comes
ENSTRUG00000013239	-	100	76.860	ENSHCOG00000021167	-	100	76.584	Hippocampus_comes
ENSTRUG00000013239	-	100	80.323	ENSIPUG00000017053	prdm12b	100	80.323	Ictalurus_punctatus
ENSTRUG00000013239	-	100	75.815	ENSIPUG00000019544	PRDM12	100	75.815	Ictalurus_punctatus
ENSTRUG00000013239	-	93	81.325	ENSSTOG00000005986	PRDM12	85	81.024	Ictidomys_tridecemlineatus
ENSTRUG00000013239	-	93	81.024	ENSJJAG00000005424	Prdm12	98	81.024	Jaculus_jaculus
ENSTRUG00000013239	-	94	86.053	ENSKMAG00000021205	-	95	85.131	Kryptolebias_marmoratus
ENSTRUG00000013239	-	100	72.727	ENSKMAG00000016921	prdm12b	100	72.236	Kryptolebias_marmoratus
ENSTRUG00000013239	-	100	77.690	ENSLBEG00000017769	prdm12b	100	77.690	Labrus_bergylta
ENSTRUG00000013239	-	100	80.890	ENSLBEG00000007776	-	100	82.199	Labrus_bergylta
ENSTRUG00000013239	-	100	79.501	ENSLACG00000017560	PRDM12	99	79.501	Latimeria_chalumnae
ENSTRUG00000013239	-	100	79.784	ENSLOCG00000005429	prdm12b	99	79.459	Lepisosteus_oculatus
ENSTRUG00000013239	-	93	80.178	ENSLAFG00000006979	PRDM12	88	79.882	Loxodonta_africana
ENSTRUG00000013239	-	100	74.599	ENSMFAG00000040322	PRDM12	99	75.134	Macaca_fascicularis
ENSTRUG00000013239	-	93	81.627	ENSMNEG00000037234	PRDM12	99	75.676	Macaca_nemestrina
ENSTRUG00000013239	-	100	78.173	ENSMAMG00000018988	-	100	79.442	Mastacembelus_armatus
ENSTRUG00000013239	-	100	78.042	ENSMAMG00000013212	prdm12b	100	78.571	Mastacembelus_armatus
ENSTRUG00000013239	-	100	80.101	ENSMZEG00005000415	PRDM12	100	80.101	Maylandia_zebra
ENSTRUG00000013239	-	98	79.437	ENSMGAG00000005438	PRDM12	98	79.437	Meleagris_gallopavo
ENSTRUG00000013239	-	100	75.269	ENSMAUG00000013040	Prdm12	99	75.000	Mesocricetus_auratus
ENSTRUG00000013239	-	93	81.627	ENSMICG00000015480	PRDM12	99	75.610	Microcebus_murinus
ENSTRUG00000013239	-	93	81.627	ENSMOCG00000021026	Prdm12	89	81.325	Microtus_ochrogaster
ENSTRUG00000013239	-	100	78.453	ENSMODG00000012108	PRDM12	99	78.453	Monodelphis_domestica
ENSTRUG00000013239	-	83	77.636	ENSMALG00000021901	prdm12b	96	77.636	Monopterus_albus
ENSTRUG00000013239	-	93	81.325	MGP_CAROLIEiJ_G0023414	Prdm12	99	75.000	Mus_caroli
ENSTRUG00000013239	-	93	81.325	ENSMUSG00000079466	Prdm12	99	75.000	Mus_musculus
ENSTRUG00000013239	-	93	81.325	MGP_PahariEiJ_G0024871	Prdm12	99	75.000	Mus_pahari
ENSTRUG00000013239	-	93	81.325	MGP_SPRETEiJ_G0024331	Prdm12	99	75.000	Mus_spretus
ENSTRUG00000013239	-	93	81.325	ENSNGAG00000018480	Prdm12	99	77.716	Nannospalax_galili
ENSTRUG00000013239	-	100	79.178	ENSNBRG00000024312	-	100	80.055	Neolamprologus_brichardi
ENSTRUG00000013239	-	100	77.249	ENSNBRG00000006727	prdm12b	100	77.513	Neolamprologus_brichardi
ENSTRUG00000013239	-	100	70.442	ENSMEUG00000003828	PRDM12	99	70.442	Notamacropus_eugenii
ENSTRUG00000013239	-	93	81.024	ENSOPRG00000008680	PRDM12	98	81.024	Ochotona_princeps
ENSTRUG00000013239	-	99	76.901	ENSODEG00000016282	PRDM12	63	76.901	Octodon_degus
ENSTRUG00000013239	-	61	79.279	ENSOANG00000001043	PRDM12	100	79.279	Ornithorhynchus_anatinus
ENSTRUG00000013239	-	86	81.373	ENSOCUG00000008241	PRDM12	96	81.046	Oryctolagus_cuniculus
ENSTRUG00000013239	-	100	77.368	ENSORLG00000007114	prdm12b	99	77.632	Oryzias_latipes
ENSTRUG00000013239	-	100	80.612	ENSORLG00000017558	-	100	81.122	Oryzias_latipes
ENSTRUG00000013239	-	100	80.662	ENSORLG00020013167	-	100	80.916	Oryzias_latipes_hni
ENSTRUG00000013239	-	100	76.440	ENSORLG00020019565	prdm12b	99	77.225	Oryzias_latipes_hni
ENSTRUG00000013239	-	100	80.612	ENSORLG00015003435	-	100	81.122	Oryzias_latipes_hsok
ENSTRUG00000013239	-	100	76.517	ENSORLG00015007621	prdm12b	99	77.309	Oryzias_latipes_hsok
ENSTRUG00000013239	-	100	85.106	ENSOMEG00000007762	-	100	85.106	Oryzias_melastigma
ENSTRUG00000013239	-	100	75.196	ENSOMEG00000004134	prdm12b	99	75.457	Oryzias_melastigma
ENSTRUG00000013239	-	93	81.627	ENSOGAG00000007557	PRDM12	97	81.325	Otolemur_garnettii
ENSTRUG00000013239	-	84	77.667	ENSPPAG00000031506	-	99	77.333	Pan_paniscus
ENSTRUG00000013239	-	100	69.945	ENSPPRG00000023024	PRDM12	92	69.672	Panthera_pardus
ENSTRUG00000013239	-	93	81.627	ENSPTRG00000021475	PRDM12	99	75.067	Pan_troglodytes
ENSTRUG00000013239	-	93	81.627	ENSPTRG00000043324	-	99	75.067	Pan_troglodytes
ENSTRUG00000013239	-	93	81.627	ENSPANG00000025967	PRDM12	99	75.676	Papio_anubis
ENSTRUG00000013239	-	100	80.000	ENSPKIG00000007228	prdm12b	100	80.106	Paramormyrops_kingsleyae
ENSTRUG00000013239	-	93	78.012	ENSPKIG00000004305	PRDM12	94	78.378	Paramormyrops_kingsleyae
ENSTRUG00000013239	-	100	78.670	ENSPSIG00000006739	PRDM12	99	78.670	Pelodiscus_sinensis
ENSTRUG00000013239	-	94	86.471	ENSPMGG00000002356	-	100	78.149	Periophthalmus_magnuspinnatus
ENSTRUG00000013239	-	100	79.032	ENSPMGG00000008867	prdm12b	99	79.032	Periophthalmus_magnuspinnatus
ENSTRUG00000013239	-	93	81.325	ENSPEMG00000009969	Prdm12	89	81.024	Peromyscus_maniculatus_bairdii
ENSTRUG00000013239	-	100	78.729	ENSPCIG00000024119	PRDM12	99	78.729	Phascolarctos_cinereus
ENSTRUG00000013239	-	100	78.495	ENSPFOG00000019841	prdm12b	100	78.495	Poecilia_formosa
ENSTRUG00000013239	-	100	75.979	ENSPLAG00000016626	prdm12b	99	75.979	Poecilia_latipinna
ENSTRUG00000013239	-	94	77.562	ENSPMEG00000016698	prdm12b	97	77.562	Poecilia_mexicana
ENSTRUG00000013239	-	97	79.155	ENSPREG00000003211	-	96	79.155	Poecilia_reticulata
ENSTRUG00000013239	-	100	75.521	ENSPREG00000015073	prdm12b	99	75.521	Poecilia_reticulata
ENSTRUG00000013239	-	96	79.592	ENSPPYG00000019694	PRDM12	95	79.300	Pongo_abelii
ENSTRUG00000013239	-	93	81.627	ENSPCOG00000022255	PRDM12	99	75.067	Propithecus_coquereli
ENSTRUG00000013239	-	93	81.325	ENSPVAG00000001511	PRDM12	99	75.067	Pteropus_vampyrus
ENSTRUG00000013239	-	100	77.719	ENSPNYG00000009607	prdm12b	100	77.719	Pundamilia_nyererei
ENSTRUG00000013239	-	100	80.101	ENSPNYG00000013589	-	100	80.101	Pundamilia_nyererei
ENSTRUG00000013239	-	100	74.074	ENSPNAG00000013396	PRDM12	100	74.074	Pygocentrus_nattereri
ENSTRUG00000013239	-	100	79.784	ENSPNAG00000024532	prdm12b	100	79.784	Pygocentrus_nattereri
ENSTRUG00000013239	-	93	81.325	ENSRNOG00000009218	Prdm12	99	75.000	Rattus_norvegicus
ENSTRUG00000013239	-	91	81.173	ENSRBIG00000042712	PRDM12	92	78.006	Rhinopithecus_bieti
ENSTRUG00000013239	-	92	81.402	ENSRROG00000043554	PRDM12	99	81.098	Rhinopithecus_roxellana
ENSTRUG00000013239	-	100	78.237	ENSSHAG00000015972	PRDM12	99	78.237	Sarcophilus_harrisii
ENSTRUG00000013239	-	100	74.359	ENSSMAG00000003754	prdm12b	100	74.872	Scophthalmus_maximus
ENSTRUG00000013239	-	100	82.597	ENSSDUG00000019071	-	100	82.597	Seriola_dumerili
ENSTRUG00000013239	-	100	76.364	ENSSDUG00000023498	prdm12b	100	76.883	Seriola_dumerili
ENSTRUG00000013239	-	100	77.225	ENSSLDG00000009557	prdm12b	100	77.487	Seriola_lalandi_dorsalis
ENSTRUG00000013239	-	100	84.078	ENSSLDG00000013562	-	100	84.637	Seriola_lalandi_dorsalis
ENSTRUG00000013239	-	100	78.947	ENSSPUG00000013424	PRDM12	99	78.947	Sphenodon_punctatus
ENSTRUG00000013239	-	100	76.702	ENSSPAG00000018824	prdm12b	100	76.963	Stegastes_partitus
ENSTRUG00000013239	-	100	74.742	ENSSPAG00000022420	-	100	74.742	Stegastes_partitus
ENSTRUG00000013239	-	93	81.627	ENSSSCG00000005703	PRDM12	99	75.472	Sus_scrofa
ENSTRUG00000013239	-	100	77.688	ENSTNIG00000009020	prdm12b	99	77.957	Tetraodon_nigroviridis
ENSTRUG00000013239	-	100	91.086	ENSTNIG00000005859	-	99	91.086	Tetraodon_nigroviridis
ENSTRUG00000013239	-	93	81.627	ENSUAMG00000009653	PRDM12	96	77.591	Ursus_americanus
ENSTRUG00000013239	-	93	81.627	ENSVVUG00000027662	PRDM12	77	81.325	Vulpes_vulpes
ENSTRUG00000013239	-	100	76.984	ENSXCOG00000002836	prdm12b	99	76.720	Xiphophorus_couchianus
ENSTRUG00000013239	-	100	78.554	ENSXMAG00000028012	-	100	78.554	Xiphophorus_maculatus
ENSTRUG00000013239	-	100	77.513	ENSXMAG00000005537	prdm12b	100	77.778	Xiphophorus_maculatus