EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000013328 (Gene tree)
Gene ID: 101061042
Gene Symbol: -
Alias: rbm4l|wu:fc25a01
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 4815 bases
Position: chr8:9473507-9478321
Accession: 101061042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000033948	zf-CCHC	PF00098.23	2.6e-06	1	1
ENSTRUP00000048277	zf-CCHC	PF00098.23	2.6e-06	1	1
ENSTRUP00000033948	RRM_5	PF13893.6	3.5e-10	1	1
ENSTRUP00000048277	RRM_5	PF13893.6	3.5e-10	1	1
ENSTRUP00000033948	RRM_1	PF00076.22	3.6e-32	1	2
ENSTRUP00000033948	RRM_1	PF00076.22	3.6e-32	2	2
ENSTRUP00000048277	RRM_1	PF00076.22	3.6e-32	1	2
ENSTRUP00000048277	RRM_1	PF00076.22	3.6e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000034074	-	2129	-	ENSTRUP00000033948	379 (aa)	-	H2UAI1
ENSTRUT00000056629	-	2340	XM_003966815	ENSTRUP00000048277	379 (aa)	XP_003966864	UPI00016E4C88

Gene Model

Click here to download ENSTRUG00000013328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000013328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000013328	-	98	45.346	ENSTRUG00000013334	rbm4.1	98	44.869

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000013328	-	99	46.948	ENSAPOG00000012353	rbm4.1	99	47.733	Acanthochromis_polyacanthus
ENSTRUG00000013328	-	99	45.775	ENSACIG00000016482	rbm4.1	99	48.317	Amphilophus_citrinellus
ENSTRUG00000013328	-	94	47.677	ENSAOCG00000010915	rbm4.1	99	47.242	Amphiprion_ocellaris
ENSTRUG00000013328	-	94	47.677	ENSAPEG00000009494	rbm4.1	99	47.242	Amphiprion_percula
ENSTRUG00000013328	-	99	45.708	ENSATEG00000001904	rbm4.1	99	46.905	Anabas_testudineus
ENSTRUG00000013328	-	100	68.490	ENSACLG00000007740	-	100	68.490	Astatotilapia_calliptera
ENSTRUG00000013328	-	99	46.244	ENSACLG00000007722	rbm4.1	99	48.317	Astatotilapia_calliptera
ENSTRUG00000013328	-	99	48.825	ENSAMXG00000036611	rbm4.1	99	49.870	Astyanax_mexicanus
ENSTRUG00000013328	-	100	65.296	ENSCSEG00000014359	-	100	65.553	Cynoglossus_semilaevis
ENSTRUG00000013328	-	98	47.242	ENSCSEG00000014365	rbm4.1	97	47.277	Cynoglossus_semilaevis
ENSTRUG00000013328	-	99	45.561	ENSCVAG00000019349	rbm4.1	99	46.988	Cyprinodon_variegatus
ENSTRUG00000013328	-	99	48.193	ENSDARG00000036386	rbm4.1	99	48.916	Danio_rerio
ENSTRUG00000013328	-	99	49.482	ENSDARG00000055080	rbm4.2	99	52.163	Danio_rerio
ENSTRUG00000013328	-	50	57.513	ENSEBUG00000007174	-	97	56.897	Eptatretus_burgeri
ENSTRUG00000013328	-	52	68.367	ENSELUG00000013205	rbm4.1	99	46.868	Esox_lucius
ENSTRUG00000013328	-	99	46.301	ENSFHEG00000022926	rbm4.1	99	46.778	Fundulus_heteroclitus
ENSTRUG00000013328	-	100	59.173	ENSGMOG00000007455	-	100	61.598	Gadus_morhua
ENSTRUG00000013328	-	99	46.667	ENSGAFG00000019302	rbm4.1	99	47.143	Gambusia_affinis
ENSTRUG00000013328	-	100	68.668	ENSGACG00000000821	-	100	68.930	Gasterosteus_aculeatus
ENSTRUG00000013328	-	94	46.774	ENSGACG00000000822	rbm4.1	95	47.934	Gasterosteus_aculeatus
ENSTRUG00000013328	-	99	46.244	ENSHBUG00000011610	rbm4.1	99	48.317	Haplochromis_burtoni
ENSTRUG00000013328	-	96	44.444	ENSHCOG00000011403	rbm4.1	99	44.192	Hippocampus_comes
ENSTRUG00000013328	-	93	48.087	ENSIPUG00000022937	rbm4.2	96	48.413	Ictalurus_punctatus
ENSTRUG00000013328	-	99	45.093	ENSIPUG00000022931	rbm4.1	99	46.099	Ictalurus_punctatus
ENSTRUG00000013328	-	95	46.914	ENSKMAG00000006556	rbm4.1	95	48.371	Kryptolebias_marmoratus
ENSTRUG00000013328	-	100	56.543	ENSKMAG00000006528	-	100	58.765	Kryptolebias_marmoratus
ENSTRUG00000013328	-	100	71.990	ENSLBEG00000019756	-	100	71.990	Labrus_bergylta
ENSTRUG00000013328	-	99	43.649	ENSLBEG00000019782	rbm4.1	99	46.081	Labrus_bergylta
ENSTRUG00000013328	-	100	69.430	ENSMAMG00000001760	-	100	70.466	Mastacembelus_armatus
ENSTRUG00000013328	-	98	45.093	ENSMAMG00000001765	rbm4.1	98	46.024	Mastacembelus_armatus
ENSTRUG00000013328	-	99	46.244	ENSMZEG00005009205	rbm4.1	99	48.317	Maylandia_zebra
ENSTRUG00000013328	-	98	46.172	ENSMMOG00000020479	rbm4.1	98	47.585	Mola_mola
ENSTRUG00000013328	-	100	73.298	ENSMALG00000020557	-	100	74.413	Monopterus_albus
ENSTRUG00000013328	-	99	47.073	ENSMALG00000020544	rbm4.1	99	47.619	Monopterus_albus
ENSTRUG00000013328	-	99	46.244	ENSNBRG00000017755	rbm4.1	99	48.317	Neolamprologus_brichardi
ENSTRUG00000013328	-	99	46.244	ENSONIG00000015730	rbm4.1	99	48.317	Oreochromis_niloticus
ENSTRUG00000013328	-	99	44.366	ENSORLG00000012496	rbm4.1	94	45.074	Oryzias_latipes
ENSTRUG00000013328	-	99	44.366	ENSORLG00020012454	rbm4.1	94	45.074	Oryzias_latipes_hni
ENSTRUG00000013328	-	99	44.366	ENSORLG00015013678	rbm4.1	99	43.868	Oryzias_latipes_hsok
ENSTRUG00000013328	-	99	44.836	ENSOMEG00000001001	rbm4.1	99	45.084	Oryzias_melastigma
ENSTRUG00000013328	-	99	47.242	ENSPFOG00000012675	rbm4.1	99	47.381	Poecilia_formosa
ENSTRUG00000013328	-	100	62.148	ENSPFOG00000012685	-	100	62.404	Poecilia_formosa
ENSTRUG00000013328	-	99	46.905	ENSPLAG00000018572	rbm4.1	99	47.381	Poecilia_latipinna
ENSTRUG00000013328	-	99	46.905	ENSPMEG00000006290	rbm4.1	99	47.381	Poecilia_mexicana
ENSTRUG00000013328	-	99	46.905	ENSPREG00000003724	rbm4.1	99	47.381	Poecilia_reticulata
ENSTRUG00000013328	-	100	59.536	ENSPREG00000003764	-	100	59.487	Poecilia_reticulata
ENSTRUG00000013328	-	99	46.244	ENSPNYG00000004662	rbm4.1	99	48.317	Pundamilia_nyererei
ENSTRUG00000013328	-	98	48.825	ENSPNAG00000013057	rbm4.2	97	49.608	Pygocentrus_nattereri
ENSTRUG00000013328	-	99	49.517	ENSPNAG00000002539	rbm4.1	99	49.395	Pygocentrus_nattereri
ENSTRUG00000013328	-	99	47.242	ENSSMAG00000007571	rbm4.1	99	47.470	Scophthalmus_maximus
ENSTRUG00000013328	-	99	43.908	ENSSDUG00000003925	rbm4.1	99	46.411	Seriola_dumerili
ENSTRUG00000013328	-	100	75.130	ENSSDUG00000003936	-	100	75.130	Seriola_dumerili
ENSTRUG00000013328	-	99	43.908	ENSSLDG00000013147	rbm4.1	99	46.411	Seriola_lalandi_dorsalis
ENSTRUG00000013328	-	100	73.575	ENSSLDG00000013157	-	100	74.611	Seriola_lalandi_dorsalis
ENSTRUG00000013328	-	100	71.802	ENSSPAG00000019046	-	100	71.802	Stegastes_partitus
ENSTRUG00000013328	-	96	47.453	ENSTNIG00000004821	rbm4.1	95	47.453	Tetraodon_nigroviridis
ENSTRUG00000013328	-	100	93.140	ENSTNIG00000000316	-	100	93.140	Tetraodon_nigroviridis
ENSTRUG00000013328	-	99	46.905	ENSXCOG00000003731	rbm4.1	99	47.381	Xiphophorus_couchianus
ENSTRUG00000013328	-	99	46.905	ENSXMAG00000008069	rbm4.1	99	47.381	Xiphophorus_maculatus
ENSTRUG00000013328	-	100	61.282	ENSXMAG00000008059	-	100	61.795	Xiphophorus_maculatus