EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000013334 (Gene tree)
Gene ID: 101061268
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 3698 bases
Position: chr8:9468619-9472316
Accession: 101061268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000033958	zf-CCHC	PF00098.23	3.5e-08	1	1
ENSTRUP00000033958	RRM_5	PF13893.6	3.9e-07	1	1
ENSTRUP00000033958	RRM_1	PF00076.22	1.3e-29	1	2
ENSTRUP00000033958	RRM_1	PF00076.22	1.3e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000034084	-	1602	XM_003966816	ENSTRUP00000033958	416 (aa)	XP_003966865	H2UAJ1

Gene Model

Click here to download ENSTRUG00000013334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000013334's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000013334	rbm4.1	66	54.000	ENSTRUG00000020901	rbm4.3	100	38.837
ENSTRUG00000013334	rbm4.1	98	44.869	ENSTRUG00000013328	-	98	45.346
ENSTRUG00000013334	rbm4.1	65	56.291	ENSTRUG00000023874	rbm4.3	92	48.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000013334	rbm4.1	100	78.571	ENSAPOG00000012353	rbm4.1	100	79.524	Acanthochromis_polyacanthus
ENSTRUG00000013334	rbm4.1	100	79.335	ENSACIG00000016482	rbm4.1	100	80.285	Amphilophus_citrinellus
ENSTRUG00000013334	rbm4.1	100	79.286	ENSAOCG00000010915	rbm4.1	100	80.238	Amphiprion_ocellaris
ENSTRUG00000013334	rbm4.1	100	79.286	ENSAPEG00000009494	rbm4.1	100	80.238	Amphiprion_percula
ENSTRUG00000013334	rbm4.1	100	79.097	ENSATEG00000001904	rbm4.1	100	80.048	Anabas_testudineus
ENSTRUG00000013334	rbm4.1	100	78.147	ENSACLG00000007722	rbm4.1	100	79.097	Astatotilapia_calliptera
ENSTRUG00000013334	rbm4.1	97	44.844	ENSACLG00000007740	-	97	45.107	Astatotilapia_calliptera
ENSTRUG00000013334	rbm4.1	100	61.905	ENSAMXG00000036611	rbm4.1	100	62.619	Astyanax_mexicanus
ENSTRUG00000013334	rbm4.1	97	72.236	ENSCSEG00000014365	rbm4.1	98	72.236	Cynoglossus_semilaevis
ENSTRUG00000013334	rbm4.1	96	46.778	ENSCSEG00000014359	-	97	47.368	Cynoglossus_semilaevis
ENSTRUG00000013334	rbm4.1	100	71.429	ENSCVAG00000019349	rbm4.1	100	73.095	Cyprinodon_variegatus
ENSTRUG00000013334	rbm4.1	100	64.387	ENSDARG00000036386	rbm4.1	100	64.387	Danio_rerio
ENSTRUG00000013334	rbm4.1	100	48.227	ENSDARG00000055080	rbm4.2	100	48.936	Danio_rerio
ENSTRUG00000013334	rbm4.1	100	60.377	ENSELUG00000013205	rbm4.1	100	60.377	Esox_lucius
ENSTRUG00000013334	rbm4.1	100	74.347	ENSFHEG00000022926	rbm4.1	100	74.347	Fundulus_heteroclitus
ENSTRUG00000013334	rbm4.1	91	48.837	ENSGMOG00000007455	-	96	49.392	Gadus_morhua
ENSTRUG00000013334	rbm4.1	100	64.336	ENSGMOG00000007464	rbm4.1	100	66.355	Gadus_morhua
ENSTRUG00000013334	rbm4.1	100	72.038	ENSGAFG00000019302	rbm4.1	100	71.801	Gambusia_affinis
ENSTRUG00000013334	rbm4.1	96	48.130	ENSGACG00000000821	-	96	49.628	Gasterosteus_aculeatus
ENSTRUG00000013334	rbm4.1	100	72.340	ENSGACG00000000822	rbm4.1	100	72.577	Gasterosteus_aculeatus
ENSTRUG00000013334	rbm4.1	100	78.147	ENSHBUG00000011610	rbm4.1	100	79.097	Haplochromis_burtoni
ENSTRUG00000013334	rbm4.1	92	68.895	ENSHCOG00000011403	rbm4.1	95	68.974	Hippocampus_comes
ENSTRUG00000013334	rbm4.1	100	59.132	ENSIPUG00000022931	rbm4.1	100	60.091	Ictalurus_punctatus
ENSTRUG00000013334	rbm4.1	100	46.919	ENSIPUG00000022937	rbm4.2	100	48.140	Ictalurus_punctatus
ENSTRUG00000013334	rbm4.1	100	71.327	ENSKMAG00000006556	rbm4.1	100	71.327	Kryptolebias_marmoratus
ENSTRUG00000013334	rbm4.1	100	76.722	ENSLBEG00000019782	rbm4.1	100	76.960	Labrus_bergylta
ENSTRUG00000013334	rbm4.1	99	46.429	ENSLBEG00000019756	-	90	59.615	Labrus_bergylta
ENSTRUG00000013334	rbm4.1	100	80.048	ENSMAMG00000001765	rbm4.1	100	81.235	Mastacembelus_armatus
ENSTRUG00000013334	rbm4.1	99	48.372	ENSMAMG00000001760	-	100	48.956	Mastacembelus_armatus
ENSTRUG00000013334	rbm4.1	100	78.147	ENSMZEG00005009205	rbm4.1	100	79.097	Maylandia_zebra
ENSTRUG00000013334	rbm4.1	100	80.760	ENSMMOG00000020479	rbm4.1	100	80.998	Mola_mola
ENSTRUG00000013334	rbm4.1	98	49.398	ENSMALG00000020557	-	98	49.880	Monopterus_albus
ENSTRUG00000013334	rbm4.1	100	79.810	ENSMALG00000020544	rbm4.1	100	80.523	Monopterus_albus
ENSTRUG00000013334	rbm4.1	100	77.910	ENSNBRG00000017755	rbm4.1	100	78.860	Neolamprologus_brichardi
ENSTRUG00000013334	rbm4.1	100	77.672	ENSONIG00000015730	rbm4.1	100	78.622	Oreochromis_niloticus
ENSTRUG00000013334	rbm4.1	100	71.190	ENSORLG00000012496	rbm4.1	100	71.190	Oryzias_latipes
ENSTRUG00000013334	rbm4.1	100	71.190	ENSORLG00020012454	rbm4.1	100	71.190	Oryzias_latipes_hni
ENSTRUG00000013334	rbm4.1	100	71.429	ENSORLG00015013678	rbm4.1	100	71.429	Oryzias_latipes_hsok
ENSTRUG00000013334	rbm4.1	100	71.905	ENSOMEG00000001001	rbm4.1	100	71.905	Oryzias_melastigma
ENSTRUG00000013334	rbm4.1	100	60.656	ENSPKIG00000020805	rbm4.1	85	78.261	Paramormyrops_kingsleyae
ENSTRUG00000013334	rbm4.1	100	72.038	ENSPFOG00000012675	rbm4.1	100	71.801	Poecilia_formosa
ENSTRUG00000013334	rbm4.1	98	44.988	ENSPFOG00000012685	-	98	45.874	Poecilia_formosa
ENSTRUG00000013334	rbm4.1	100	72.038	ENSPLAG00000018572	rbm4.1	100	71.801	Poecilia_latipinna
ENSTRUG00000013334	rbm4.1	100	72.038	ENSPMEG00000006290	rbm4.1	100	71.801	Poecilia_mexicana
ENSTRUG00000013334	rbm4.1	98	43.276	ENSPREG00000003764	-	91	61.881	Poecilia_reticulata
ENSTRUG00000013334	rbm4.1	100	72.038	ENSPREG00000003724	rbm4.1	100	71.801	Poecilia_reticulata
ENSTRUG00000013334	rbm4.1	100	78.147	ENSPNYG00000004662	rbm4.1	100	79.097	Pundamilia_nyererei
ENSTRUG00000013334	rbm4.1	100	64.387	ENSPNAG00000002539	rbm4.1	100	65.258	Pygocentrus_nattereri
ENSTRUG00000013334	rbm4.1	100	50.118	ENSPNAG00000013057	rbm4.2	100	50.118	Pygocentrus_nattereri
ENSTRUG00000013334	rbm4.1	100	60.187	ENSSFOG00015021996	sf1	100	61.124	Scleropages_formosus
ENSTRUG00000013334	rbm4.1	100	77.327	ENSSMAG00000007571	rbm4.1	100	77.327	Scophthalmus_maximus
ENSTRUG00000013334	rbm4.1	97	49.760	ENSSDUG00000003936	-	99	50.239	Seriola_dumerili
ENSTRUG00000013334	rbm4.1	100	80.285	ENSSDUG00000003925	rbm4.1	100	81.473	Seriola_dumerili
ENSTRUG00000013334	rbm4.1	97	47.470	ENSSLDG00000013157	-	99	50.117	Seriola_lalandi_dorsalis
ENSTRUG00000013334	rbm4.1	100	80.285	ENSSLDG00000013147	rbm4.1	100	81.473	Seriola_lalandi_dorsalis
ENSTRUG00000013334	rbm4.1	100	77.962	ENSSPAG00000019053	rbm4.1	100	80.806	Stegastes_partitus
ENSTRUG00000013334	rbm4.1	98	46.359	ENSSPAG00000019046	-	98	47.229	Stegastes_partitus
ENSTRUG00000013334	rbm4.1	80	92.417	ENSTNIG00000004821	rbm4.1	100	61.538	Tetraodon_nigroviridis
ENSTRUG00000013334	rbm4.1	99	44.869	ENSTNIG00000000316	-	98	45.775	Tetraodon_nigroviridis
ENSTRUG00000013334	rbm4.1	100	72.038	ENSXCOG00000003731	rbm4.1	100	71.801	Xiphophorus_couchianus
ENSTRUG00000013334	rbm4.1	98	45.477	ENSXMAG00000008059	-	82	69.714	Xiphophorus_maculatus
ENSTRUG00000013334	rbm4.1	100	71.801	ENSXMAG00000008069	rbm4.1	100	71.564	Xiphophorus_maculatus