EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000013488 (Gene tree)
Gene ID: 101079573
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 12553 bases
Position: chr1:3541384-3553936
Accession: 101079573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000034398	RNA_pol_Rpb1_5	PF04998.17	3.6e-88	1	1
ENSTRUP00000034398	RNA_pol_Rpb1_4	PF05000.17	1.1e-31	1	1
ENSTRUP00000034398	RNA_pol_Rpb1_2	PF00623.20	1.6e-72	1	1
ENSTRUP00000034400	RNA_pol_Rpb1_2	PF00623.20	6.6e-45	1	1
ENSTRUP00000034398	RNA_pol_Rpb1_3	PF04983.18	2.4e-40	1	1
ENSTRUP00000034400	RNA_pol_Rpb1_1	PF04997.12	3.4e-93	1	1
ENSTRUP00000034398	RNA_pol_Rpb1_1	PF04997.12	3.2e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000034524	-	5148	XM_003961239	ENSTRUP00000034398	1390 (aa)	XP_003961288	H2UBT0
ENSTRUT00000034526	-	1461	-	ENSTRUP00000034400	486 (aa)	-	H2UBT2

Gene Model

Click here to download ENSTRUG00000013488's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03020	RNA polymerase	KEGG
tru04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000013488's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000013488	polr3a	70	33.262	ENSTRUG00000002210	polr1a	70	33.121
ENSTRUG00000013488	polr3a	93	37.852	ENSTRUG00000012320	polr2a	66	37.852

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000013488	polr3a	100	89.353	ENSG00000148606	POLR3A	98	92.405	Homo_sapiens
ENSTRUG00000013488	polr3a	98	93.291	ENSAPOG00000022727	polr3a	99	91.638	Acanthochromis_polyacanthus
ENSTRUG00000013488	polr3a	100	89.304	ENSAMEG00000017801	POLR3A	100	89.304	Ailuropoda_melanoleuca
ENSTRUG00000013488	polr3a	98	93.711	ENSACIG00000024504	polr3a	97	95.923	Amphilophus_citrinellus
ENSTRUG00000013488	polr3a	100	92.086	ENSAOCG00000003949	-	100	92.086	Amphiprion_ocellaris
ENSTRUG00000013488	polr3a	100	95.468	ENSAOCG00000002071	polr3a	100	95.468	Amphiprion_ocellaris
ENSTRUG00000013488	polr3a	100	95.324	ENSAPEG00000001966	-	100	95.324	Amphiprion_percula
ENSTRUG00000013488	polr3a	100	95.468	ENSAPEG00000013351	polr3a	100	95.544	Amphiprion_percula
ENSTRUG00000013488	polr3a	100	95.396	ENSATEG00000023277	polr3a	100	95.396	Anabas_testudineus
ENSTRUG00000013488	polr3a	99	89.891	ENSAPLG00000015878	POLR3A	99	89.891	Anas_platyrhynchos
ENSTRUG00000013488	polr3a	98	86.792	ENSACAG00000007985	POLR3A	99	88.694	Anolis_carolinensis
ENSTRUG00000013488	polr3a	100	86.853	ENSANAG00000028922	POLR3A	96	92.994	Aotus_nancymaae
ENSTRUG00000013488	polr3a	100	95.468	ENSACLG00000005914	polr3a	100	95.544	Astatotilapia_calliptera
ENSTRUG00000013488	polr3a	99	88.617	ENSAMXG00000018852	polr3a	99	88.617	Astyanax_mexicanus
ENSTRUG00000013488	polr3a	100	89.424	ENSBTAG00000013259	POLR3A	100	89.424	Bos_taurus
ENSTRUG00000013488	polr3a	98	56.815	WBGene00004411	rpc-1	99	56.815	Caenorhabditis_elegans
ENSTRUG00000013488	polr3a	100	89.209	ENSCJAG00000001015	POLR3A	100	89.209	Callithrix_jacchus
ENSTRUG00000013488	polr3a	100	89.496	ENSCAFG00000015546	POLR3A	100	89.496	Canis_familiaris
ENSTRUG00000013488	polr3a	100	89.496	ENSCAFG00020014711	POLR3A	100	89.496	Canis_lupus_dingo
ENSTRUG00000013488	polr3a	100	89.137	ENSCHIG00000000352	POLR3A	100	89.137	Capra_hircus
ENSTRUG00000013488	polr3a	100	88.849	ENSTSYG00000006671	POLR3A	100	88.849	Carlito_syrichta
ENSTRUG00000013488	polr3a	99	89.236	ENSCAPG00000016031	POLR3A	100	89.236	Cavia_aperea
ENSTRUG00000013488	polr3a	100	89.137	ENSCPOG00000022387	POLR3A	100	89.137	Cavia_porcellus
ENSTRUG00000013488	polr3a	100	87.914	ENSCCAG00000032995	POLR3A	96	92.405	Cebus_capucinus
ENSTRUG00000013488	polr3a	100	89.353	ENSCATG00000035842	POLR3A	98	92.405	Cercocebus_atys
ENSTRUG00000013488	polr3a	100	88.993	ENSCLAG00000009629	POLR3A	100	88.993	Chinchilla_lanigera
ENSTRUG00000013488	polr3a	100	89.353	ENSCSAG00000009292	POLR3A	100	89.353	Chlorocebus_sabaeus
ENSTRUG00000013488	polr3a	85	75.253	ENSCHOG00000008368	POLR3A	100	75.253	Choloepus_hoffmanni
ENSTRUG00000013488	polr3a	99	89.769	ENSCPBG00000002079	POLR3A	99	89.769	Chrysemys_picta_bellii
ENSTRUG00000013488	polr3a	100	68.319	ENSCSAVG00000009925	-	100	68.319	Ciona_savignyi
ENSTRUG00000013488	polr3a	86	85.442	ENSCANG00000041071	POLR3A	98	93.038	Colobus_angolensis_palliatus
ENSTRUG00000013488	polr3a	98	87.212	ENSCGRG00001015599	-	92	90.385	Cricetulus_griseus_chok1gshd
ENSTRUG00000013488	polr3a	98	87.212	ENSCGRG00000001019	Polr3a	100	87.977	Cricetulus_griseus_crigri
ENSTRUG00000013488	polr3a	100	94.748	ENSCSEG00000016653	polr3a	100	94.748	Cynoglossus_semilaevis
ENSTRUG00000013488	polr3a	100	94.748	ENSCVAG00000023049	polr3a	100	94.748	Cyprinodon_variegatus
ENSTRUG00000013488	polr3a	99	91.354	ENSDARG00000102569	polr3a	99	91.354	Danio_rerio
ENSTRUG00000013488	polr3a	100	88.633	ENSDNOG00000010194	POLR3A	100	88.633	Dasypus_novemcinctus
ENSTRUG00000013488	polr3a	100	89.209	ENSDORG00000000184	Polr3a	100	89.209	Dipodomys_ordii
ENSTRUG00000013488	polr3a	99	56.440	FBgn0030687	CG17209	99	56.440	Drosophila_melanogaster
ENSTRUG00000013488	polr3a	88	89.474	ENSETEG00000007477	POLR3A	89	89.474	Echinops_telfairi
ENSTRUG00000013488	polr3a	78	75.263	ENSEBUG00000013761	polr3a	98	75.878	Eptatretus_burgeri
ENSTRUG00000013488	polr3a	100	89.353	ENSEASG00005023053	POLR3A	100	89.353	Equus_asinus_asinus
ENSTRUG00000013488	polr3a	97	89.493	ENSECAG00000019416	POLR3A	100	89.330	Equus_caballus
ENSTRUG00000013488	polr3a	98	84.486	ENSEEUG00000001774	POLR3A	100	84.937	Erinaceus_europaeus
ENSTRUG00000013488	polr3a	100	90.668	ENSELUG00000014016	polr3a	100	90.668	Esox_lucius
ENSTRUG00000013488	polr3a	100	89.496	ENSFCAG00000000843	POLR3A	100	89.496	Felis_catus
ENSTRUG00000013488	polr3a	100	89.432	ENSFALG00000006913	POLR3A	100	89.432	Ficedula_albicollis
ENSTRUG00000013488	polr3a	100	89.424	ENSFDAG00000007813	POLR3A	100	89.424	Fukomys_damarensis
ENSTRUG00000013488	polr3a	98	92.243	ENSFHEG00000011922	polr3a	99	94.737	Fundulus_heteroclitus
ENSTRUG00000013488	polr3a	100	87.473	ENSGMOG00000000291	polr3a	99	87.473	Gadus_morhua
ENSTRUG00000013488	polr3a	100	89.928	ENSGALG00000004947	POLR3A	100	89.928	Gallus_gallus
ENSTRUG00000013488	polr3a	100	94.532	ENSGAFG00000005112	polr3a	100	94.532	Gambusia_affinis
ENSTRUG00000013488	polr3a	100	93.741	ENSGACG00000002304	polr3a	100	93.741	Gasterosteus_aculeatus
ENSTRUG00000013488	polr3a	95	89.629	ENSGAGG00000010386	POLR3A	98	89.629	Gopherus_agassizii
ENSTRUG00000013488	polr3a	99	88.439	ENSGGOG00000027729	POLR3A	100	90.468	Gorilla_gorilla
ENSTRUG00000013488	polr3a	100	95.468	ENSHBUG00000018098	polr3a	100	95.468	Haplochromis_burtoni
ENSTRUG00000013488	polr3a	100	89.281	ENSHGLG00000017899	POLR3A	100	89.281	Heterocephalus_glaber_female
ENSTRUG00000013488	polr3a	100	89.281	ENSHGLG00100008483	POLR3A	100	89.281	Heterocephalus_glaber_male
ENSTRUG00000013488	polr3a	100	93.525	ENSHCOG00000001075	polr3a	100	93.525	Hippocampus_comes
ENSTRUG00000013488	polr3a	98	89.308	ENSIPUG00000001706	polr3a	96	86.028	Ictalurus_punctatus
ENSTRUG00000013488	polr3a	100	89.281	ENSSTOG00000012983	POLR3A	100	89.281	Ictidomys_tridecemlineatus
ENSTRUG00000013488	polr3a	98	86.373	ENSJJAG00000016217	-	98	77.673	Jaculus_jaculus
ENSTRUG00000013488	polr3a	100	94.029	ENSKMAG00000015290	polr3a	100	94.029	Kryptolebias_marmoratus
ENSTRUG00000013488	polr3a	99	93.876	ENSLBEG00000017214	polr3a	99	93.876	Labrus_bergylta
ENSTRUG00000013488	polr3a	97	87.361	ENSLACG00000018557	POLR3A	99	87.361	Latimeria_chalumnae
ENSTRUG00000013488	polr3a	100	91.888	ENSLOCG00000004942	polr3a	100	91.888	Lepisosteus_oculatus
ENSTRUG00000013488	polr3a	100	88.138	ENSLAFG00000016719	POLR3A	100	88.138	Loxodonta_africana
ENSTRUG00000013488	polr3a	100	89.281	ENSMFAG00000032218	POLR3A	100	89.281	Macaca_fascicularis
ENSTRUG00000013488	polr3a	100	89.281	ENSMMUG00000005514	POLR3A	98	92.405	Macaca_mulatta
ENSTRUG00000013488	polr3a	99	82.916	ENSMNEG00000035163	POLR3A	99	88.968	Macaca_nemestrina
ENSTRUG00000013488	polr3a	100	85.612	ENSMLEG00000030014	POLR3A	98	92.405	Mandrillus_leucophaeus
ENSTRUG00000013488	polr3a	100	95.396	ENSMAMG00000017497	polr3a	100	95.396	Mastacembelus_armatus
ENSTRUG00000013488	polr3a	100	95.468	ENSMZEG00005000576	polr3a	100	95.468	Maylandia_zebra
ENSTRUG00000013488	polr3a	98	81.092	ENSMGAG00000005713	-	100	73.082	Meleagris_gallopavo
ENSTRUG00000013488	polr3a	100	86.978	ENSMAUG00000016247	Polr3a	100	86.978	Mesocricetus_auratus
ENSTRUG00000013488	polr3a	100	89.353	ENSMICG00000005937	POLR3A	100	90.617	Microcebus_murinus
ENSTRUG00000013488	polr3a	100	89.209	ENSMOCG00000012185	Polr3a	100	89.209	Microtus_ochrogaster
ENSTRUG00000013488	polr3a	100	95.540	ENSMMOG00000013822	polr3a	100	95.540	Mola_mola
ENSTRUG00000013488	polr3a	100	89.065	ENSMODG00000001036	POLR3A	100	89.065	Monodelphis_domestica
ENSTRUG00000013488	polr3a	100	94.676	ENSMALG00000001249	polr3a	100	94.676	Monopterus_albus
ENSTRUG00000013488	polr3a	100	89.137	MGP_CAROLIEiJ_G0019016	Polr3a	100	89.137	Mus_caroli
ENSTRUG00000013488	polr3a	100	89.209	ENSMUSG00000025280	Polr3a	100	89.209	Mus_musculus
ENSTRUG00000013488	polr3a	100	89.137	MGP_PahariEiJ_G0030029	Polr3a	100	89.137	Mus_pahari
ENSTRUG00000013488	polr3a	100	86.547	MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	Mus_spretus
ENSTRUG00000013488	polr3a	100	88.730	ENSMPUG00000003790	POLR3A	100	88.730	Mustela_putorius_furo
ENSTRUG00000013488	polr3a	100	88.345	ENSMLUG00000011522	POLR3A	100	88.345	Myotis_lucifugus
ENSTRUG00000013488	polr3a	100	88.058	ENSNGAG00000015863	Polr3a	100	88.058	Nannospalax_galili
ENSTRUG00000013488	polr3a	100	93.094	ENSNBRG00000014262	polr3a	100	93.094	Neolamprologus_brichardi
ENSTRUG00000013488	polr3a	87	83.233	ENSNLEG00000010501	POLR3A	92	83.233	Nomascus_leucogenys
ENSTRUG00000013488	polr3a	99	76.873	ENSMEUG00000012446	POLR3A	100	76.873	Notamacropus_eugenii
ENSTRUG00000013488	polr3a	100	84.892	ENSOPRG00000001880	-	100	84.892	Ochotona_princeps
ENSTRUG00000013488	polr3a	100	88.705	ENSODEG00000015146	POLR3A	100	88.705	Octodon_degus
ENSTRUG00000013488	polr3a	100	95.683	ENSONIG00000016129	polr3a	100	95.683	Oreochromis_niloticus
ENSTRUG00000013488	polr3a	98	88.751	ENSOANG00000007013	POLR3A	100	88.751	Ornithorhynchus_anatinus
ENSTRUG00000013488	polr3a	100	89.209	ENSOCUG00000012450	POLR3A	100	89.209	Oryctolagus_cuniculus
ENSTRUG00000013488	polr3a	100	94.604	ENSORLG00000008958	polr3a	100	94.604	Oryzias_latipes
ENSTRUG00000013488	polr3a	100	92.230	ENSORLG00020007525	polr3a	98	95.007	Oryzias_latipes_hni
ENSTRUG00000013488	polr3a	100	94.604	ENSORLG00015006633	polr3a	100	94.604	Oryzias_latipes_hsok
ENSTRUG00000013488	polr3a	100	93.813	ENSOMEG00000012865	polr3a	100	93.813	Oryzias_melastigma
ENSTRUG00000013488	polr3a	100	89.137	ENSOGAG00000010995	POLR3A	100	89.137	Otolemur_garnettii
ENSTRUG00000013488	polr3a	100	89.152	ENSOARG00000009656	POLR3A	100	89.152	Ovis_aries
ENSTRUG00000013488	polr3a	98	85.954	ENSPPAG00000041726	-	99	86.635	Pan_paniscus
ENSTRUG00000013488	polr3a	100	89.496	ENSPPRG00000002128	POLR3A	100	89.496	Panthera_pardus
ENSTRUG00000013488	polr3a	100	89.496	ENSPTIG00000020916	POLR3A	100	89.496	Panthera_tigris_altaica
ENSTRUG00000013488	polr3a	100	89.424	ENSPTRG00000002664	POLR3A	98	92.405	Pan_troglodytes
ENSTRUG00000013488	polr3a	100	89.281	ENSPANG00000022508	POLR3A	98	92.405	Papio_anubis
ENSTRUG00000013488	polr3a	100	91.583	ENSPKIG00000008140	polr3a	100	92.619	Paramormyrops_kingsleyae
ENSTRUG00000013488	polr3a	98	89.701	ENSPSIG00000002092	POLR3A	100	89.701	Pelodiscus_sinensis
ENSTRUG00000013488	polr3a	94	81.182	ENSPMGG00000010601	polr3a	97	84.091	Periophthalmus_magnuspinnatus
ENSTRUG00000013488	polr3a	100	88.921	ENSPEMG00000006768	Polr3a	100	88.921	Peromyscus_maniculatus_bairdii
ENSTRUG00000013488	polr3a	100	89.137	ENSPCIG00000015842	POLR3A	100	89.137	Phascolarctos_cinereus
ENSTRUG00000013488	polr3a	98	92.453	ENSPFOG00000022090	POLR3A	99	93.396	Poecilia_formosa
ENSTRUG00000013488	polr3a	54	95.705	ENSPFOG00000006458	polr3a	100	95.705	Poecilia_formosa
ENSTRUG00000013488	polr3a	98	92.453	ENSPFOG00000021951	polr3a	100	93.396	Poecilia_formosa
ENSTRUG00000013488	polr3a	100	94.676	ENSPLAG00000000997	polr3a	100	94.676	Poecilia_latipinna
ENSTRUG00000013488	polr3a	98	92.453	ENSPLAG00000008311	-	96	93.396	Poecilia_latipinna
ENSTRUG00000013488	polr3a	98	92.469	ENSPMEG00000021564	-	100	92.469	Poecilia_mexicana
ENSTRUG00000013488	polr3a	100	94.604	ENSPMEG00000006821	polr3a	100	94.604	Poecilia_mexicana
ENSTRUG00000013488	polr3a	100	94.460	ENSPREG00000002385	polr3a	100	94.460	Poecilia_reticulata
ENSTRUG00000013488	polr3a	93	89.311	ENSPPYG00000002305	POLR3A	99	89.311	Pongo_abelii
ENSTRUG00000013488	polr3a	98	75.891	ENSPCAG00000005690	POLR3A	87	77.863	Procavia_capensis
ENSTRUG00000013488	polr3a	100	89.209	ENSPCOG00000028311	POLR3A	100	89.209	Propithecus_coquereli
ENSTRUG00000013488	polr3a	100	87.914	ENSPVAG00000015553	POLR3A	100	87.914	Pteropus_vampyrus
ENSTRUG00000013488	polr3a	100	95.540	ENSPNYG00000020987	polr3a	100	95.540	Pundamilia_nyererei
ENSTRUG00000013488	polr3a	99	87.680	ENSPNAG00000006629	polr3a	99	87.680	Pygocentrus_nattereri
ENSTRUG00000013488	polr3a	100	89.065	ENSRNOG00000010008	Polr3a	100	89.065	Rattus_norvegicus
ENSTRUG00000013488	polr3a	100	85.755	ENSRBIG00000034967	POLR3A	98	92.405	Rhinopithecus_bieti
ENSTRUG00000013488	polr3a	100	89.424	ENSRROG00000025527	POLR3A	98	92.405	Rhinopithecus_roxellana
ENSTRUG00000013488	polr3a	97	50.279	YOR116C	RPO31	98	50.279	Saccharomyces_cerevisiae
ENSTRUG00000013488	polr3a	100	89.353	ENSSBOG00000022199	POLR3A	100	89.353	Saimiri_boliviensis_boliviensis
ENSTRUG00000013488	polr3a	100	89.065	ENSSHAG00000007588	POLR3A	94	89.065	Sarcophilus_harrisii
ENSTRUG00000013488	polr3a	100	92.446	ENSSFOG00015014357	polr3a	100	92.446	Scleropages_formosus
ENSTRUG00000013488	polr3a	100	94.892	ENSSMAG00000001780	polr3a	100	94.892	Scophthalmus_maximus
ENSTRUG00000013488	polr3a	100	96.115	ENSSDUG00000019840	polr3a	100	96.115	Seriola_dumerili
ENSTRUG00000013488	polr3a	100	96.115	ENSSLDG00000023908	polr3a	100	96.115	Seriola_lalandi_dorsalis
ENSTRUG00000013488	polr3a	69	89.342	ENSSARG00000009916	POLR3A	89	89.342	Sorex_araneus
ENSTRUG00000013488	polr3a	100	87.410	ENSSPUG00000013209	POLR3A	100	87.410	Sphenodon_punctatus
ENSTRUG00000013488	polr3a	100	95.827	ENSSPAG00000017712	polr3a	100	95.827	Stegastes_partitus
ENSTRUG00000013488	polr3a	100	89.353	ENSSSCG00000010327	POLR3A	100	89.353	Sus_scrofa
ENSTRUG00000013488	polr3a	100	89.424	ENSTGUG00000006423	-	100	89.424	Taeniopygia_guttata
ENSTRUG00000013488	polr3a	100	96.911	ENSTNIG00000013151	polr3a	100	96.911	Tetraodon_nigroviridis
ENSTRUG00000013488	polr3a	71	91.489	ENSTBEG00000015288	POLR3A	75	91.489	Tupaia_belangeri
ENSTRUG00000013488	polr3a	98	87.631	ENSTTRG00000007817	POLR3A	100	83.453	Tursiops_truncatus
ENSTRUG00000013488	polr3a	100	87.194	ENSUAMG00000011283	POLR3A	100	87.194	Ursus_americanus
ENSTRUG00000013488	polr3a	100	89.496	ENSUMAG00000013913	POLR3A	100	89.496	Ursus_maritimus
ENSTRUG00000013488	polr3a	95	87.013	ENSVPAG00000003285	POLR3A	100	81.382	Vicugna_pacos
ENSTRUG00000013488	polr3a	100	89.424	ENSVVUG00000025523	POLR3A	100	89.424	Vulpes_vulpes
ENSTRUG00000013488	polr3a	98	88.000	ENSXETG00000018101	polr3a	99	90.050	Xenopus_tropicalis
ENSTRUG00000013488	polr3a	98	92.662	ENSXCOG00000006098	polr3a	98	93.553	Xiphophorus_couchianus
ENSTRUG00000013488	polr3a	100	94.820	ENSXMAG00000015213	polr3a	100	94.820	Xiphophorus_maculatus