EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000013604 (Gene tree)
Gene ID: 101076348
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 5648 bases
Position: chr8:8412425-8418072
Accession: 101076348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000034763	KH_1	PF00013.29	4.3e-49	1	3
ENSTRUP00000034763	KH_1	PF00013.29	4.3e-49	2	3
ENSTRUP00000034763	KH_1	PF00013.29	4.3e-49	3	3
ENSTRUP00000034764	KH_1	PF00013.29	4.5e-49	1	3
ENSTRUP00000034764	KH_1	PF00013.29	4.5e-49	2	3
ENSTRUP00000034764	KH_1	PF00013.29	4.5e-49	3	3
ENSTRUP00000034766	KH_1	PF00013.29	8.1e-37	1	2
ENSTRUP00000034766	KH_1	PF00013.29	8.1e-37	2	2
ENSTRUP00000034766	KH_2	PF07650.17	3.9e-11	1	1
ENSTRUP00000034763	KH_2	PF07650.17	4.2e-10	1	1
ENSTRUP00000034764	KH_2	PF07650.17	4.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000034891	-	1020	-	ENSTRUP00000034764	339 (aa)	-	H2UCU5
ENSTRUT00000034890	-	1008	XM_011606488	ENSTRUP00000034763	335 (aa)	XP_011604790	H2UCU4
ENSTRUT00000034893	-	686	-	ENSTRUP00000034766	228 (aa)	-	H2UCU7

Gene Model

Click here to download ENSTRUG00000013604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000013604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000013604	pcbp3	63	34.667	ENSTRUG00000004615	fubp1	59	34.667
ENSTRUG00000013604	pcbp3	87	34.694	ENSTRUG00000009908	igf2bp2b	62	34.694
ENSTRUG00000013604	pcbp3	86	40.000	ENSTRUG00000018658	fubp3	71	40.000
ENSTRUG00000013604	pcbp3	86	39.655	ENSTRUG00000016275	-	88	39.655
ENSTRUG00000013604	pcbp3	93	63.830	ENSTRUG00000007426	-	69	63.830
ENSTRUG00000013604	pcbp3	86	39.655	ENSTRUG00000019498	NOVA2	88	39.655
ENSTRUG00000013604	pcbp3	81	82.162	ENSTRUG00000017789	zgc:110045	91	82.162
ENSTRUG00000013604	pcbp3	87	81.000	ENSTRUG00000009361	pcbp2	96	73.520
ENSTRUG00000013604	pcbp3	92	78.774	ENSTRUG00000011419	PCBP2	93	77.000
ENSTRUG00000013604	pcbp3	74	45.946	ENSTRUG00000010659	hnrnpk	57	45.946
ENSTRUG00000013604	pcbp3	80	47.297	ENSTRUG00000000535	hnrpkl	69	47.297
ENSTRUG00000013604	pcbp3	86	93.127	ENSTRUG00000006280	-	89	93.127
ENSTRUG00000013604	pcbp3	88	41.270	ENSTRUG00000013259	-	69	41.270

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000013604	pcbp3	100	92.353	ENSAPOG00000016582	-	100	92.353	Acanthochromis_polyacanthus
ENSTRUG00000013604	pcbp3	95	93.478	ENSAPOG00000020003	pcbp3	86	93.478	Acanthochromis_polyacanthus
ENSTRUG00000013604	pcbp3	82	97.872	ENSAMEG00000001697	-	96	85.207	Ailuropoda_melanoleuca
ENSTRUG00000013604	pcbp3	100	93.410	ENSACIG00000010933	pcbp3	100	93.410	Amphilophus_citrinellus
ENSTRUG00000013604	pcbp3	95	92.570	ENSACIG00000002739	-	97	92.570	Amphilophus_citrinellus
ENSTRUG00000013604	pcbp3	97	91.818	ENSAOCG00000008592	-	100	91.818	Amphiprion_ocellaris
ENSTRUG00000013604	pcbp3	79	98.710	ENSAOCG00000007806	-	97	89.189	Amphiprion_ocellaris
ENSTRUG00000013604	pcbp3	100	92.898	ENSAPEG00000008011	pcbp3	100	92.898	Amphiprion_percula
ENSTRUG00000013604	pcbp3	95	91.641	ENSAPEG00000005209	-	97	91.641	Amphiprion_percula
ENSTRUG00000013604	pcbp3	95	91.950	ENSATEG00000009833	-	97	91.950	Anabas_testudineus
ENSTRUG00000013604	pcbp3	95	93.072	ENSATEG00000015787	-	100	93.072	Anabas_testudineus
ENSTRUG00000013604	pcbp3	84	92.188	ENSAPLG00000008951	-	82	74.932	Anas_platyrhynchos
ENSTRUG00000013604	pcbp3	93	86.405	ENSAPLG00000002975	-	95	86.405	Anas_platyrhynchos
ENSTRUG00000013604	pcbp3	93	83.180	ENSACAG00000009819	-	95	83.180	Anolis_carolinensis
ENSTRUG00000013604	pcbp3	96	89.908	ENSACAG00000004607	-	96	84.726	Anolis_carolinensis
ENSTRUG00000013604	pcbp3	79	95.798	ENSANAG00000030702	-	91	96.591	Aotus_nancymaae
ENSTRUG00000013604	pcbp3	100	91.765	ENSACLG00000003801	-	100	91.765	Astatotilapia_calliptera
ENSTRUG00000013604	pcbp3	100	92.045	ENSACLG00000011835	pcbp3	100	92.045	Astatotilapia_calliptera
ENSTRUG00000013604	pcbp3	94	67.160	ENSAMXG00000001760	zgc:110045	73	67.761	Astyanax_mexicanus
ENSTRUG00000013604	pcbp3	100	91.714	ENSAMXG00000003440	pcbp3	100	91.714	Astyanax_mexicanus
ENSTRUG00000013604	pcbp3	95	89.130	ENSAMXG00000013588	-	100	89.130	Astyanax_mexicanus
ENSTRUG00000013604	pcbp3	82	97.872	ENSCAFG00020019472	-	81	88.843	Canis_lupus_dingo
ENSTRUG00000013604	pcbp3	93	90.221	ENSCSAG00000007440	-	87	90.221	Chlorocebus_sabaeus
ENSTRUG00000013604	pcbp3	98	86.787	ENSCPBG00000012151	-	95	86.787	Chrysemys_picta_bellii
ENSTRUG00000013604	pcbp3	98	80.409	ENSCPBG00000000733	-	65	92.188	Chrysemys_picta_bellii
ENSTRUG00000013604	pcbp3	99	89.778	ENSCSEG00000000822	pcbp3	99	91.615	Cynoglossus_semilaevis
ENSTRUG00000013604	pcbp3	85	95.876	ENSCSEG00000016984	-	77	95.876	Cynoglossus_semilaevis
ENSTRUG00000013604	pcbp3	100	92.614	ENSCVAG00000014482	pcbp3	100	92.614	Cyprinodon_variegatus
ENSTRUG00000013604	pcbp3	100	91.765	ENSCVAG00000005262	-	100	91.765	Cyprinodon_variegatus
ENSTRUG00000013604	pcbp3	100	92.000	ENSDARG00000054378	pcbp3	100	92.000	Danio_rerio
ENSTRUG00000013604	pcbp3	93	78.864	ENSETEG00000015988	-	95	78.864	Echinops_telfairi
ENSTRUG00000013604	pcbp3	83	74.211	ENSEBUG00000005495	pcbp3	68	66.946	Eptatretus_burgeri
ENSTRUG00000013604	pcbp3	94	76.364	ENSEBUG00000007485	-	92	74.569	Eptatretus_burgeri
ENSTRUG00000013604	pcbp3	84	69.896	ENSEBUG00000016192	pcbp3	99	71.174	Eptatretus_burgeri
ENSTRUG00000013604	pcbp3	100	91.501	ENSELUG00000003521	pcbp3	100	91.501	Esox_lucius
ENSTRUG00000013604	pcbp3	100	92.059	ENSELUG00000001560	-	100	83.565	Esox_lucius
ENSTRUG00000013604	pcbp3	84	92.708	ENSFALG00000004411	-	77	75.204	Ficedula_albicollis
ENSTRUG00000013604	pcbp3	93	89.905	ENSFALG00000003949	-	92	96.809	Ficedula_albicollis
ENSTRUG00000013604	pcbp3	97	91.489	ENSFHEG00000016615	pcbp3	97	91.489	Fundulus_heteroclitus
ENSTRUG00000013604	pcbp3	95	91.950	ENSFHEG00000006539	-	97	91.950	Fundulus_heteroclitus
ENSTRUG00000013604	pcbp3	75	98.246	ENSGMOG00000011992	pcbp3	96	77.551	Gadus_morhua
ENSTRUG00000013604	pcbp3	94	68.529	ENSGMOG00000008611	-	100	68.529	Gadus_morhua
ENSTRUG00000013604	pcbp3	96	86.239	ENSGALG00000004394	-	98	83.756	Gallus_gallus
ENSTRUG00000013604	pcbp3	84	92.708	ENSGALG00000013155	-	98	83.129	Gallus_gallus
ENSTRUG00000013604	pcbp3	100	91.765	ENSGAFG00000010274	-	100	91.765	Gambusia_affinis
ENSTRUG00000013604	pcbp3	95	90.964	ENSGAFG00000011430	pcbp3	96	90.964	Gambusia_affinis
ENSTRUG00000013604	pcbp3	86	97.949	ENSGACG00000002266	-	97	85.174	Gasterosteus_aculeatus
ENSTRUG00000013604	pcbp3	100	84.649	ENSGACG00000014955	-	97	81.020	Gasterosteus_aculeatus
ENSTRUG00000013604	pcbp3	96	81.818	ENSGAGG00000006956	-	95	78.355	Gopherus_agassizii
ENSTRUG00000013604	pcbp3	79	90.968	ENSGAGG00000000271	-	100	84.643	Gopherus_agassizii
ENSTRUG00000013604	pcbp3	100	92.045	ENSHBUG00000010697	pcbp3	100	92.045	Haplochromis_burtoni
ENSTRUG00000013604	pcbp3	100	91.765	ENSHBUG00000021782	-	100	91.765	Haplochromis_burtoni
ENSTRUG00000013604	pcbp3	86	97.462	ENSHCOG00000006067	-	93	97.462	Hippocampus_comes
ENSTRUG00000013604	pcbp3	100	92.877	ENSHCOG00000017868	pcbp3	100	92.877	Hippocampus_comes
ENSTRUG00000013604	pcbp3	99	90.222	ENSIPUG00000006238	pcbp3	97	91.022	Ictalurus_punctatus
ENSTRUG00000013604	pcbp3	100	92.614	ENSKMAG00000003046	pcbp3	100	92.614	Kryptolebias_marmoratus
ENSTRUG00000013604	pcbp3	100	90.882	ENSKMAG00000018530	-	100	90.882	Kryptolebias_marmoratus
ENSTRUG00000013604	pcbp3	100	81.121	ENSLBEG00000006542	-	100	81.121	Labrus_bergylta
ENSTRUG00000013604	pcbp3	96	92.000	ENSLBEG00000006201	pcbp3	96	92.000	Labrus_bergylta
ENSTRUG00000013604	pcbp3	96	89.908	ENSLACG00000010386	pcbp3	77	80.441	Latimeria_chalumnae
ENSTRUG00000013604	pcbp3	84	90.104	ENSLACG00000010804	zgc:110045	77	74.725	Latimeria_chalumnae
ENSTRUG00000013604	pcbp3	93	83.180	ENSLOCG00000005058	zgc:110045	80	83.180	Lepisosteus_oculatus
ENSTRUG00000013604	pcbp3	96	90.826	ENSLOCG00000009369	pcbp3	96	90.214	Lepisosteus_oculatus
ENSTRUG00000013604	pcbp3	95	90.712	ENSMAMG00000011620	-	97	90.712	Mastacembelus_armatus
ENSTRUG00000013604	pcbp3	95	93.168	ENSMAMG00000022336	pcbp3	93	93.168	Mastacembelus_armatus
ENSTRUG00000013604	pcbp3	100	87.464	ENSMZEG00005014882	-	100	87.464	Maylandia_zebra
ENSTRUG00000013604	pcbp3	100	92.857	ENSMZEG00005008993	pcbp3	100	92.857	Maylandia_zebra
ENSTRUG00000013604	pcbp3	84	92.708	ENSMGAG00000006794	-	77	75.204	Meleagris_gallopavo
ENSTRUG00000013604	pcbp3	94	77.429	ENSMGAG00000001883	-	96	78.857	Meleagris_gallopavo
ENSTRUG00000013604	pcbp3	95	91.077	ENSMMOG00000000730	pcbp3	88	91.077	Mola_mola
ENSTRUG00000013604	pcbp3	95	91.022	ENSMMOG00000005216	-	97	91.022	Mola_mola
ENSTRUG00000013604	pcbp3	71	79.907	ENSMODG00000027884	-	93	79.907	Monodelphis_domestica
ENSTRUG00000013604	pcbp3	100	92.857	ENSMALG00000000691	pcbp3	100	92.857	Monopterus_albus
ENSTRUG00000013604	pcbp3	93	81.416	ENSMPUG00000001779	-	88	81.416	Mustela_putorius_furo
ENSTRUG00000013604	pcbp3	100	87.887	ENSNBRG00000016714	-	100	87.887	Neolamprologus_brichardi
ENSTRUG00000013604	pcbp3	100	92.550	ENSNBRG00000016409	-	100	92.550	Neolamprologus_brichardi
ENSTRUG00000013604	pcbp3	94	86.977	ENSOPRG00000003431	-	99	83.965	Ochotona_princeps
ENSTRUG00000013604	pcbp3	95	91.049	ENSONIG00000004611	-	97	91.049	Oreochromis_niloticus
ENSTRUG00000013604	pcbp3	99	92.000	ENSONIG00000012122	-	98	87.252	Oreochromis_niloticus
ENSTRUG00000013604	pcbp3	93	89.590	ENSOCUG00000002696	-	87	89.590	Oryctolagus_cuniculus
ENSTRUG00000013604	pcbp3	99	91.150	ENSORLG00000022739	-	99	91.150	Oryzias_latipes
ENSTRUG00000013604	pcbp3	95	93.498	ENSORLG00000000059	pcbp3	100	93.498	Oryzias_latipes
ENSTRUG00000013604	pcbp3	95	93.498	ENSORLG00020012671	pcbp3	97	93.498	Oryzias_latipes_hni
ENSTRUG00000013604	pcbp3	99	90.855	ENSORLG00020006124	-	99	90.855	Oryzias_latipes_hni
ENSTRUG00000013604	pcbp3	99	91.150	ENSORLG00015008051	-	99	91.150	Oryzias_latipes_hsok
ENSTRUG00000013604	pcbp3	95	93.498	ENSORLG00015000429	pcbp3	97	93.498	Oryzias_latipes_hsok
ENSTRUG00000013604	pcbp3	95	90.741	ENSOMEG00000020162	-	97	90.741	Oryzias_melastigma
ENSTRUG00000013604	pcbp3	86	95.189	ENSOMEG00000020811	pcbp3	96	95.189	Oryzias_melastigma
ENSTRUG00000013604	pcbp3	88	90.385	ENSOGAG00000008044	-	96	82.286	Otolemur_garnettii
ENSTRUG00000013604	pcbp3	89	77.570	ENSPKIG00000020913	-	92	77.570	Paramormyrops_kingsleyae
ENSTRUG00000013604	pcbp3	100	91.176	ENSPKIG00000019329	pcbp3	100	91.176	Paramormyrops_kingsleyae
ENSTRUG00000013604	pcbp3	76	92.793	ENSPSIG00000008350	-	72	79.693	Pelodiscus_sinensis
ENSTRUG00000013604	pcbp3	93	77.246	ENSPSIG00000014970	-	95	77.844	Pelodiscus_sinensis
ENSTRUG00000013604	pcbp3	100	92.571	ENSPMGG00000022383	pcbp3	100	92.571	Periophthalmus_magnuspinnatus
ENSTRUG00000013604	pcbp3	95	69.113	ENSPMAG00000004551	pcbp3	90	69.113	Petromyzon_marinus
ENSTRUG00000013604	pcbp3	82	88.830	ENSPMAG00000004637	-	97	88.830	Petromyzon_marinus
ENSTRUG00000013604	pcbp3	96	89.908	ENSPCIG00000028092	-	96	89.602	Phascolarctos_cinereus
ENSTRUG00000013604	pcbp3	94	87.651	ENSPLAG00000004074	-	89	87.651	Poecilia_latipinna
ENSTRUG00000013604	pcbp3	99	85.903	ENSPLAG00000011449	pcbp3	100	80.101	Poecilia_latipinna
ENSTRUG00000013604	pcbp3	100	89.086	ENSPMEG00000006653	-	100	89.086	Poecilia_mexicana
ENSTRUG00000013604	pcbp3	100	92.090	ENSPMEG00000021239	pcbp3	100	92.090	Poecilia_mexicana
ENSTRUG00000013604	pcbp3	95	91.304	ENSPREG00000015736	pcbp3	99	91.304	Poecilia_reticulata
ENSTRUG00000013604	pcbp3	95	91.022	ENSPREG00000020585	-	97	91.022	Poecilia_reticulata
ENSTRUG00000013604	pcbp3	95	91.022	ENSPNYG00000013205	-	97	91.022	Pundamilia_nyererei
ENSTRUG00000013604	pcbp3	95	93.498	ENSPNYG00000012326	pcbp3	95	93.498	Pundamilia_nyererei
ENSTRUG00000013604	pcbp3	100	89.143	ENSPNAG00000008541	-	100	89.143	Pygocentrus_nattereri
ENSTRUG00000013604	pcbp3	95	91.667	ENSPNAG00000015104	pcbp3	97	91.667	Pygocentrus_nattereri
ENSTRUG00000013604	pcbp3	93	90.221	ENSRNOG00000001245	Pcbp3	95	90.221	Rattus_norvegicus
ENSTRUG00000013604	pcbp3	93	81.459	ENSRBIG00000028177	-	96	76.257	Rhinopithecus_bieti
ENSTRUG00000013604	pcbp3	85	95.361	ENSSHAG00000007890	-	90	95.361	Sarcophilus_harrisii
ENSTRUG00000013604	pcbp3	100	91.765	ENSSFOG00015010205	pcbp3	100	91.765	Scleropages_formosus
ENSTRUG00000013604	pcbp3	93	81.935	ENSSFOG00015007118	-	93	81.935	Scleropages_formosus
ENSTRUG00000013604	pcbp3	100	89.429	ENSSFOG00015014706	pcbp3	100	89.429	Scleropages_formosus
ENSTRUG00000013604	pcbp3	95	93.478	ENSSMAG00000011929	pcbp3	97	93.478	Scophthalmus_maximus
ENSTRUG00000013604	pcbp3	100	91.471	ENSSMAG00000003135	-	100	91.471	Scophthalmus_maximus
ENSTRUG00000013604	pcbp3	99	88.889	ENSSDUG00000011608	pcbp3	99	92.216	Seriola_dumerili
ENSTRUG00000013604	pcbp3	100	90.265	ENSSDUG00000008502	-	100	90.265	Seriola_dumerili
ENSTRUG00000013604	pcbp3	99	88.889	ENSSLDG00000008518	pcbp3	99	92.216	Seriola_lalandi_dorsalis
ENSTRUG00000013604	pcbp3	100	92.353	ENSSLDG00000020161	-	100	92.353	Seriola_lalandi_dorsalis
ENSTRUG00000013604	pcbp3	98	75.967	ENSSPUG00000013214	-	93	82.439	Sphenodon_punctatus
ENSTRUG00000013604	pcbp3	79	98.710	ENSSPAG00000004190	-	97	89.189	Stegastes_partitus
ENSTRUG00000013604	pcbp3	100	83.381	ENSSPAG00000023341	-	100	83.381	Stegastes_partitus
ENSTRUG00000013604	pcbp3	93	81.050	ENSTGUG00000003316	-	96	81.050	Taeniopygia_guttata
ENSTRUG00000013604	pcbp3	93	83.912	ENSTGUG00000008158	-	96	83.912	Taeniopygia_guttata
ENSTRUG00000013604	pcbp3	85	95.876	ENSTTRG00000015075	-	96	82.997	Tursiops_truncatus
ENSTRUG00000013604	pcbp3	82	96.809	ENSXETG00000011483	pcbp1	96	83.976	Xenopus_tropicalis
ENSTRUG00000013604	pcbp3	81	91.573	ENSXETG00000010491	pcbp2	77	73.654	Xenopus_tropicalis
ENSTRUG00000013604	pcbp3	100	92.090	ENSXCOG00000020481	pcbp3	100	92.090	Xiphophorus_couchianus
ENSTRUG00000013604	pcbp3	100	92.059	ENSXMAG00000028711	-	100	92.059	Xiphophorus_maculatus
ENSTRUG00000013604	pcbp3	100	92.898	ENSXMAG00000008175	pcbp3	100	92.898	Xiphophorus_maculatus