EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000013749 (Gene tree)
Gene ID: 101070070
Gene Symbol: ran
Alias: fc16b04|wu:fc16b04
Full Name: RAN%2C member RAS oncogene family
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 3828 bases
Position: chr14:2986185-2990012
Accession: 101070070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000035114	MMR_HSR1	PF01926.23	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000035242	-	2256	XM_003970269	ENSTRUP00000035114	215 (aa)	XP_003970318	H2UDU5

Gene Model

Click here to download ENSTRUG00000013749's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03008	Ribosome biogenesis in eukaryotes	KEGG
tru03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000013749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000013749	ran	75	33.333	ENSTRUG00000010082	RAB7A	81	33.333
ENSTRUG00000013749	ran	74	31.481	ENSTRUG00000023164	rab1ab	80	31.481
ENSTRUG00000013749	ran	85	30.612	ENSTRUG00000007556	rab11al	89	30.612
ENSTRUG00000013749	ran	75	30.303	ENSTRUG00000017824	rab15	77	30.303
ENSTRUG00000013749	ran	58	34.586	ENSTRUG00000023011	rerg	61	34.586
ENSTRUG00000013749	ran	71	33.117	ENSTRUG00000020633	rab35b	77	33.117
ENSTRUG00000013749	ran	77	33.728	ENSTRUG00000015590	rab5c	77	33.728
ENSTRUG00000013749	ran	74	32.099	ENSTRUG00000004287	rab1ba	81	32.099
ENSTRUG00000013749	ran	74	31.737	ENSTRUG00000009903	zgc:101559	71	31.737
ENSTRUG00000013749	ran	72	30.864	ENSTRUG00000014481	rab34b	65	30.864
ENSTRUG00000013749	ran	75	33.133	ENSTRUG00000024368	rab5aa	76	33.133
ENSTRUG00000013749	ran	75	33.333	ENSTRUG00000020093	-	81	33.333
ENSTRUG00000013749	ran	75	30.178	ENSTRUG00000013963	RAB9A	84	30.178
ENSTRUG00000013749	ran	71	32.258	ENSTRUG00000007504	rab25b	75	32.258
ENSTRUG00000013749	ran	76	31.138	ENSTRUG00000009223	rab41	79	31.138
ENSTRUG00000013749	ran	71	33.548	ENSTRUG00000022029	rab11bb	71	33.548
ENSTRUG00000013749	ran	78	30.636	ENSTRUG00000011399	-	80	30.636
ENSTRUG00000013749	ran	78	33.721	ENSTRUG00000004283	rab18b	83	33.721
ENSTRUG00000013749	ran	74	30.723	ENSTRUG00000008698	rab9a	82	30.723
ENSTRUG00000013749	ran	71	32.903	ENSTRUG00000021614	-	71	32.903
ENSTRUG00000013749	ran	71	33.548	ENSTRUG00000021619	-	72	33.548
ENSTRUG00000013749	ran	74	30.864	ENSTRUG00000003363	rab2a	81	31.169
ENSTRUG00000013749	ran	78	31.765	ENSTRUG00000004984	rab18a	83	31.765
ENSTRUG00000013749	ran	76	31.395	ENSTRUG00000020335	rab33a	67	31.395
ENSTRUG00000013749	ran	73	30.675	ENSTRUG00000010224	rab42a	75	30.675
ENSTRUG00000013749	ran	70	32.667	ENSTRUG00000012454	rabl2	67	32.667
ENSTRUG00000013749	ran	71	33.548	ENSTRUG00000020792	rab11a	72	33.548
ENSTRUG00000013749	ran	74	32.716	ENSTRUG00000024994	RAB1A	80	32.716
ENSTRUG00000013749	ran	74	31.902	ENSTRUG00000024177	rab13	82	31.902
ENSTRUG00000013749	ran	71	32.903	ENSTRUG00000025076	si:dkey-16l2.16	89	33.036
ENSTRUG00000013749	ran	74	34.969	ENSTRUG00000022559	rab30	80	34.969

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000013749	ran	99	92.991	ENSG00000132341	RAN	100	94.531	Homo_sapiens
ENSTRUG00000013749	ran	99	85.514	ENSBTAG00000024233	-	99	85.514	Bos_taurus
ENSTRUG00000013749	ran	99	86.449	ENSCAFG00020003142	-	99	86.449	Canis_lupus_dingo
ENSTRUG00000013749	ran	99	82.710	ENSCHIG00000025632	-	99	82.710	Capra_hircus
ENSTRUG00000013749	ran	69	91.275	ENSCSAG00000001906	-	98	91.275	Chlorocebus_sabaeus
ENSTRUG00000013749	ran	71	88.889	ENSCING00000003944	-	95	88.889	Ciona_intestinalis
ENSTRUG00000013749	ran	99	92.523	ENSCANG00000004264	-	99	92.523	Colobus_angolensis_palliatus
ENSTRUG00000013749	ran	99	90.187	ENSCGRG00001009212	-	99	90.187	Cricetulus_griseus_chok1gshd
ENSTRUG00000013749	ran	99	79.812	ENSCGRG00000007401	-	97	79.812	Cricetulus_griseus_crigri
ENSTRUG00000013749	ran	99	90.187	ENSCGRG00000019639	Rasl2-9	99	90.187	Cricetulus_griseus_crigri
ENSTRUG00000013749	ran	99	85.981	ENSDNOG00000031679	-	98	85.981	Dasypus_novemcinctus
ENSTRUG00000013749	ran	96	91.304	ENSHCOG00000009757	ran	96	91.304	Hippocampus_comes
ENSTRUG00000013749	ran	67	94.444	ENSLACG00000018793	RAN	98	94.444	Latimeria_chalumnae
ENSTRUG00000013749	ran	99	90.187	ENSMAUG00000015974	-	99	90.187	Mesocricetus_auratus
ENSTRUG00000013749	ran	99	88.444	ENSMICG00000000653	-	99	88.444	Microcebus_murinus
ENSTRUG00000013749	ran	99	87.850	ENSMUSG00000083649	Rasl2-9	99	87.850	Mus_musculus
ENSTRUG00000013749	ran	82	91.477	MGP_SPRETEiJ_G0028777	-	95	91.477	Mus_spretus
ENSTRUG00000013749	ran	99	87.850	MGP_SPRETEiJ_G0030206	Rasl2-9	99	87.850	Mus_spretus
ENSTRUG00000013749	ran	99	76.168	ENSNGAG00000016204	-	99	76.168	Nannospalax_galili
ENSTRUG00000013749	ran	95	90.196	ENSPMGG00000008616	ran	100	90.196	Periophthalmus_magnuspinnatus
ENSTRUG00000013749	ran	92	91.878	ENSPEMG00000010658	-	92	91.878	Peromyscus_maniculatus_bairdii
ENSTRUG00000013749	ran	99	75.234	ENSRBIG00000037389	-	98	75.234	Rhinopithecus_bieti
ENSTRUG00000013749	ran	89	93.194	ENSRROG00000044174	-	96	93.194	Rhinopithecus_roxellana
ENSTRUG00000013749	ran	100	98.605	ENSTNIG00000013137	ran	99	98.605	Tetraodon_nigroviridis