EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000014005 (Gene tree)
Gene ID: 101077779
Gene Symbol: -
Alias: -
Full Name: AF4/FMR2 family member 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 14196 bases
Position: chr6:3827333-3841528
Accession: 101077779
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	Domain number	Total number
ENSTRUP00000035830	AF-4	PF05110.13	1	1
ENSTRUP00000035831	AF-4	PF05110.13	1	2
ENSTRUP00000035831	AF-4	PF05110.13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000035959	-	7148	XM_011604601	ENSTRUP00000035831	1159 (aa)	XP_011602903	H2UFW1
ENSTRUT00000035958	-	7229	-	ENSTRUP00000035830	1186 (aa)	-	H2UFW0

Gene Model

Click here to download ENSTRUG00000014005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000014005's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000014005	-	99	55.323	ENSAPOG00000002994	-	99	56.208	Acanthochromis_polyacanthus
ENSTRUG00000014005	-	52	69.355	ENSAMEG00000003337	AFF1	52	69.355	Ailuropoda_melanoleuca
ENSTRUG00000014005	-	71	57.182	ENSACIG00000021066	-	95	57.182	Amphilophus_citrinellus
ENSTRUG00000014005	-	99	56.999	ENSAOCG00000020283	-	99	56.703	Amphiprion_ocellaris
ENSTRUG00000014005	-	99	57.167	ENSAPEG00000018794	-	99	56.964	Amphiprion_percula
ENSTRUG00000014005	-	99	55.841	ENSATEG00000015552	-	99	55.997	Anabas_testudineus
ENSTRUG00000014005	-	99	49.958	ENSACLG00000002905	-	99	50.378	Astatotilapia_calliptera
ENSTRUG00000014005	-	53	39.791	ENSAMXG00000020137	aff4	88	36.971	Astyanax_mexicanus
ENSTRUG00000014005	-	51	42.683	ENSAMXG00000000387	aff2	58	42.683	Astyanax_mexicanus
ENSTRUG00000014005	-	56	50.000	ENSBTAG00000012449	AFF3	55	50.000	Bos_taurus
ENSTRUG00000014005	-	54	53.226	ENSCJAG00000010071	AFF3	52	53.226	Callithrix_jacchus
ENSTRUG00000014005	-	69	36.879	ENSCAFG00000009476	AFF1	69	37.352	Canis_familiaris
ENSTRUG00000014005	-	54	53.125	ENSCAFG00000023079	AFF3	53	53.125	Canis_familiaris
ENSTRUG00000014005	-	67	36.453	ENSCAFG00020008224	AFF1	70	36.946	Canis_lupus_dingo
ENSTRUG00000014005	-	68	31.906	ENSCLAG00000017100	AFF3	61	54.839	Chinchilla_lanigera
ENSTRUG00000014005	-	55	65.672	ENSCPBG00000005382	AFF1	83	65.672	Chrysemys_picta_bellii
ENSTRUG00000014005	-	53	39.175	ENSCPBG00000020831	AFF2	58	35.019	Chrysemys_picta_bellii
ENSTRUG00000014005	-	54	48.387	ENSCGRG00001014566	Aff3	54	48.387	Cricetulus_griseus_chok1gshd
ENSTRUG00000014005	-	54	48.387	ENSCGRG00000003408	Aff3	61	50.000	Cricetulus_griseus_crigri
ENSTRUG00000014005	-	99	46.580	ENSCVAG00000015626	-	99	47.232	Cyprinodon_variegatus
ENSTRUG00000014005	-	66	34.096	ENSEBUG00000012097	aff4	64	34.238	Eptatretus_burgeri
ENSTRUG00000014005	-	54	51.613	ENSECAG00000006249	AFF3	54	51.613	Equus_caballus
ENSTRUG00000014005	-	99	40.839	ENSELUG00000019953	-	99	41.162	Esox_lucius
ENSTRUG00000014005	-	54	53.125	ENSFCAG00000029975	AFF3	53	53.125	Felis_catus
ENSTRUG00000014005	-	59	50.820	ENSFALG00000008916	AFF4	55	50.820	Ficedula_albicollis
ENSTRUG00000014005	-	77	43.150	ENSFHEG00000003521	-	100	43.366	Fundulus_heteroclitus
ENSTRUG00000014005	-	55	46.875	ENSGALG00000009168	AFF2	65	34.664	Gallus_gallus
ENSTRUG00000014005	-	99	53.719	ENSGACG00000016333	-	99	56.712	Gasterosteus_aculeatus
ENSTRUG00000014005	-	99	50.714	ENSHBUG00000005828	-	99	50.378	Haplochromis_burtoni
ENSTRUG00000014005	-	99	43.834	ENSHCOG00000000539	-	99	43.061	Hippocampus_comes
ENSTRUG00000014005	-	54	51.613	ENSJJAG00000013155	Aff3	61	53.226	Jaculus_jaculus
ENSTRUG00000014005	-	99	50.465	ENSKMAG00000013113	-	99	49.958	Kryptolebias_marmoratus
ENSTRUG00000014005	-	99	58.923	ENSLBEG00000016928	-	99	58.923	Labrus_bergylta
ENSTRUG00000014005	-	55	37.637	ENSLACG00000008849	AFF4	69	37.637	Latimeria_chalumnae
ENSTRUG00000014005	-	77	38.121	ENSLOCG00000004025	AFF1	89	36.791	Lepisosteus_oculatus
ENSTRUG00000014005	-	54	53.226	ENSMFAG00000031640	AFF3	53	53.226	Macaca_fascicularis
ENSTRUG00000014005	-	99	54.857	ENSMAMG00000016189	-	99	54.531	Mastacembelus_armatus
ENSTRUG00000014005	-	99	50.126	ENSMZEG00005020442	-	99	50.463	Maylandia_zebra
ENSTRUG00000014005	-	68	35.309	ENSMAUG00000010241	Aff1	67	35.309	Mesocricetus_auratus
ENSTRUG00000014005	-	54	53.226	ENSMICG00000016001	AFF3	53	53.226	Microcebus_murinus
ENSTRUG00000014005	-	99	55.287	ENSMALG00000002436	-	99	55.204	Monopterus_albus
ENSTRUG00000014005	-	70	32.152	ENSMUSG00000037138	Aff3	53	51.562	Mus_musculus
ENSTRUG00000014005	-	52	67.742	ENSMLUG00000000293	AFF1	53	67.742	Myotis_lucifugus
ENSTRUG00000014005	-	99	49.043	ENSONIG00000007636	-	99	49.040	Oreochromis_niloticus
ENSTRUG00000014005	-	57	44.186	ENSOCUG00000013873	AFF2	52	42.045	Oryctolagus_cuniculus
ENSTRUG00000014005	-	54	65.217	ENSOCUG00000002105	AFF1	51	65.217	Oryctolagus_cuniculus
ENSTRUG00000014005	-	70	78.261	ENSORLG00000006428	-	99	78.261	Oryzias_latipes
ENSTRUG00000014005	-	83	78.261	ENSORLG00020003991	-	99	78.261	Oryzias_latipes_hni
ENSTRUG00000014005	-	83	78.261	ENSORLG00015009287	-	99	78.261	Oryzias_latipes_hsok
ENSTRUG00000014005	-	83	82.353	ENSOMEG00000005799	-	99	82.353	Oryzias_melastigma
ENSTRUG00000014005	-	54	53.226	ENSPPRG00000014330	AFF3	54	53.226	Panthera_pardus
ENSTRUG00000014005	-	71	35.652	ENSPTIG00000011838	AFF1	88	36.543	Panthera_tigris_altaica
ENSTRUG00000014005	-	53	47.619	ENSPKIG00000024325	AFF4	56	47.619	Paramormyrops_kingsleyae
ENSTRUG00000014005	-	50	38.788	ENSPSIG00000013003	AFF4	51	41.060	Pelodiscus_sinensis
ENSTRUG00000014005	-	53	43.548	ENSPCIG00000030054	AFF2	67	32.365	Phascolarctos_cinereus
ENSTRUG00000014005	-	99	49.031	ENSPFOG00000004581	-	99	48.290	Poecilia_formosa
ENSTRUG00000014005	-	53	50.000	ENSPLAG00000005101	aff2	64	50.000	Poecilia_latipinna
ENSTRUG00000014005	-	94	47.943	ENSPLAG00000012910	-	99	47.168	Poecilia_latipinna
ENSTRUG00000014005	-	65	47.722	ENSPMEG00000020100	-	99	46.633	Poecilia_mexicana
ENSTRUG00000014005	-	99	48.273	ENSPREG00000003514	-	99	49.364	Poecilia_reticulata
ENSTRUG00000014005	-	54	53.226	ENSPCOG00000016986	AFF3	54	53.226	Propithecus_coquereli
ENSTRUG00000014005	-	50	67.164	ENSPVAG00000014455	AFF1	50	67.164	Pteropus_vampyrus
ENSTRUG00000014005	-	69	31.317	ENSPVAG00000006595	AFF3	62	31.533	Pteropus_vampyrus
ENSTRUG00000014005	-	53	56.000	ENSRNOG00000002232	Aff1	52	64.516	Rattus_norvegicus
ENSTRUG00000014005	-	77	31.737	ENSSHAG00000004203	AFF1	99	31.825	Sarcophilus_harrisii
ENSTRUG00000014005	-	78	37.796	ENSSFOG00015021743	-	99	36.356	Scleropages_formosus
ENSTRUG00000014005	-	98	55.724	ENSSMAG00000007062	-	98	55.230	Scophthalmus_maximus
ENSTRUG00000014005	-	59	55.742	ENSSDUG00000023775	-	97	55.322	Seriola_dumerili
ENSTRUG00000014005	-	99	58.251	ENSSLDG00000006836	-	99	58.436	Seriola_lalandi_dorsalis
ENSTRUG00000014005	-	97	56.729	ENSSPAG00000003972	-	98	56.692	Stegastes_partitus
ENSTRUG00000014005	-	98	65.503	ENSTNIG00000007537	-	99	65.503	Tetraodon_nigroviridis
ENSTRUG00000014005	-	53	40.110	ENSUMAG00000025433	AFF1	78	35.526	Ursus_maritimus
ENSTRUG00000014005	-	54	53.226	ENSVVUG00000028696	AFF3	52	53.226	Vulpes_vulpes
ENSTRUG00000014005	-	78	33.039	ENSXETG00000019955	aff1	79	32.867	Xenopus_tropicalis
ENSTRUG00000014005	-	99	48.523	ENSXMAG00000004657	-	99	48.270	Xiphophorus_maculatus