EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000014050 (Gene tree)
Gene ID: 101065369
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4804 bases
Position: chr17:3904756-3909559
Accession: 101065369
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000035945	RRM_1	PF00076.22	2.4e-38	1	3
ENSTRUP00000035945	RRM_1	PF00076.22	2.4e-38	2	3
ENSTRUP00000035945	RRM_1	PF00076.22	2.4e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000036075	-	1728	XM_011612612	ENSTRUP00000035945	575 (aa)	XP_011610914	H2UG74

Gene Model

Click here to download ENSTRUG00000014050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000014050's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000014050	rbm47	81	50.640	ENSTRUG00000001982	a1cf	88	51.193
ENSTRUG00000014050	rbm47	50	65.035	ENSTRUG00000004237	rbm46	60	66.084
ENSTRUG00000014050	rbm47	52	55.082	ENSTRUG00000008817	hnrnpr	54	50.685
ENSTRUG00000014050	rbm47	53	54.194	ENSTRUG00000005365	syncripl	76	46.604

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000014050	rbm47	98	84.746	ENSG00000163694	RBM47	100	85.253	Homo_sapiens
ENSTRUG00000014050	rbm47	100	88.870	ENSAPOG00000011062	rbm47	100	89.882	Acanthochromis_polyacanthus
ENSTRUG00000014050	rbm47	100	73.877	ENSAMEG00000009672	RBM47	100	75.541	Ailuropoda_melanoleuca
ENSTRUG00000014050	rbm47	100	89.813	ENSACIG00000011531	rbm47	100	89.813	Amphilophus_citrinellus
ENSTRUG00000014050	rbm47	100	91.017	ENSAOCG00000022245	rbm47	100	91.186	Amphiprion_ocellaris
ENSTRUG00000014050	rbm47	100	91.171	ENSAPEG00000018304	rbm47	100	91.341	Amphiprion_percula
ENSTRUG00000014050	rbm47	100	88.926	ENSATEG00000018400	rbm47	100	89.091	Anabas_testudineus
ENSTRUG00000014050	rbm47	100	74.415	ENSAPLG00000013974	RBM47	100	74.916	Anas_platyrhynchos
ENSTRUG00000014050	rbm47	100	74.043	ENSACAG00000011833	RBM47	100	74.751	Anolis_carolinensis
ENSTRUG00000014050	rbm47	100	83.288	ENSANAG00000029440	RBM47	93	84.658	Aotus_nancymaae
ENSTRUG00000014050	rbm47	100	87.664	ENSACLG00000016902	rbm47	100	87.664	Astatotilapia_calliptera
ENSTRUG00000014050	rbm47	98	83.681	ENSAMXG00000021794	rbm47	95	83.333	Astyanax_mexicanus
ENSTRUG00000014050	rbm47	100	74.787	ENSBTAG00000002356	RBM47	98	77.172	Bos_taurus
ENSTRUG00000014050	rbm47	99	84.123	ENSCJAG00000019385	RBM47	93	84.384	Callithrix_jacchus
ENSTRUG00000014050	rbm47	98	75.261	ENSCAFG00000015898	RBM47	100	75.084	Canis_familiaris
ENSTRUG00000014050	rbm47	83	77.393	ENSCAFG00020010558	RBM47	94	81.698	Canis_lupus_dingo
ENSTRUG00000014050	rbm47	100	74.787	ENSCHIG00000026214	RBM47	98	77.172	Capra_hircus
ENSTRUG00000014050	rbm47	87	65.878	ENSTSYG00000033612	RBM47	93	65.680	Carlito_syrichta
ENSTRUG00000014050	rbm47	100	70.588	ENSCAPG00000008426	RBM47	100	70.420	Cavia_aperea
ENSTRUG00000014050	rbm47	100	82.400	ENSCPOG00000014100	RBM47	100	76.174	Cavia_porcellus
ENSTRUG00000014050	rbm47	100	84.110	ENSCCAG00000030129	-	93	84.110	Cebus_capucinus
ENSTRUG00000014050	rbm47	99	55.095	ENSCCAG00000024397	-	98	54.922	Cebus_capucinus
ENSTRUG00000014050	rbm47	98	84.746	ENSCATG00000042064	RBM47	95	83.690	Cercocebus_atys
ENSTRUG00000014050	rbm47	100	74.790	ENSCLAG00000001684	RBM47	94	83.893	Chinchilla_lanigera
ENSTRUG00000014050	rbm47	100	74.415	ENSCSAG00000017060	RBM47	100	76.087	Chlorocebus_sabaeus
ENSTRUG00000014050	rbm47	89	72.748	ENSCHOG00000011731	RBM47	88	76.404	Choloepus_hoffmanni
ENSTRUG00000014050	rbm47	100	77.592	ENSCPBG00000013831	RBM47	100	78.130	Chrysemys_picta_bellii
ENSTRUG00000014050	rbm47	100	81.551	ENSCANG00000019997	RBM47	95	83.422	Colobus_angolensis_palliatus
ENSTRUG00000014050	rbm47	90	76.800	ENSCGRG00001020102	-	100	63.667	Cricetulus_griseus_chok1gshd
ENSTRUG00000014050	rbm47	100	74.210	ENSCGRG00001000623	-	100	75.208	Cricetulus_griseus_chok1gshd
ENSTRUG00000014050	rbm47	100	73.667	ENSCGRG00000007762	-	100	82.278	Cricetulus_griseus_crigri
ENSTRUG00000014050	rbm47	88	78.512	ENSCGRG00000014760	-	98	64.471	Cricetulus_griseus_crigri
ENSTRUG00000014050	rbm47	100	88.475	ENSCSEG00000004545	rbm47	100	88.475	Cynoglossus_semilaevis
ENSTRUG00000014050	rbm47	100	89.116	ENSCVAG00000020144	rbm47	100	89.116	Cyprinodon_variegatus
ENSTRUG00000014050	rbm47	98	83.798	ENSDARG00000061985	rbm47	100	81.488	Danio_rerio
ENSTRUG00000014050	rbm47	100	74.536	ENSDNOG00000046854	RBM47	98	77.740	Dasypus_novemcinctus
ENSTRUG00000014050	rbm47	100	74.917	ENSDORG00000010144	Rbm47	100	75.748	Dipodomys_ordii
ENSTRUG00000014050	rbm47	99	75.129	ENSETEG00000009194	RBM47	100	75.960	Echinops_telfairi
ENSTRUG00000014050	rbm47	97	60.279	ENSEBUG00000011912	rbm47	95	60.771	Eptatretus_burgeri
ENSTRUG00000014050	rbm47	100	73.826	ENSEASG00005008443	RBM47	100	76.510	Equus_asinus_asinus
ENSTRUG00000014050	rbm47	100	73.826	ENSECAG00000004400	RBM47	100	76.510	Equus_caballus
ENSTRUG00000014050	rbm47	72	88.517	ENSEEUG00000001194	RBM47	74	86.036	Erinaceus_europaeus
ENSTRUG00000014050	rbm47	100	78.339	ENSELUG00000006148	rbm47	100	80.130	Esox_lucius
ENSTRUG00000014050	rbm47	100	75.630	ENSFCAG00000012399	RBM47	100	77.311	Felis_catus
ENSTRUG00000014050	rbm47	100	76.087	ENSFALG00000002861	RBM47	100	77.258	Ficedula_albicollis
ENSTRUG00000014050	rbm47	100	75.726	ENSFDAG00000016326	RBM47	98	75.597	Fukomys_damarensis
ENSTRUG00000014050	rbm47	100	88.547	ENSFHEG00000007938	rbm47	100	88.547	Fundulus_heteroclitus
ENSTRUG00000014050	rbm47	98	83.276	ENSGMOG00000014802	rbm47	94	83.276	Gadus_morhua
ENSTRUG00000014050	rbm47	63	84.511	ENSGALG00000014267	RBM47	98	85.326	Gallus_gallus
ENSTRUG00000014050	rbm47	63	93.225	ENSGAFG00000020571	rbm47	98	93.225	Gambusia_affinis
ENSTRUG00000014050	rbm47	100	85.289	ENSGACG00000016223	rbm47	100	86.340	Gasterosteus_aculeatus
ENSTRUG00000014050	rbm47	100	77.592	ENSGAGG00000020051	RBM47	100	78.130	Gopherus_agassizii
ENSTRUG00000014050	rbm47	98	84.746	ENSGGOG00000001367	RBM47	95	83.690	Gorilla_gorilla
ENSTRUG00000014050	rbm47	100	87.377	ENSHBUG00000003520	rbm47	100	87.377	Haplochromis_burtoni
ENSTRUG00000014050	rbm47	85	64.402	ENSHGLG00000016914	RBM47	94	84.564	Heterocephalus_glaber_female
ENSTRUG00000014050	rbm47	100	67.227	ENSHGLG00100003071	-	100	67.227	Heterocephalus_glaber_male
ENSTRUG00000014050	rbm47	100	75.427	ENSHGLG00100014028	-	94	84.564	Heterocephalus_glaber_male
ENSTRUG00000014050	rbm47	99	88.625	ENSHCOG00000002074	rbm47	99	88.625	Hippocampus_comes
ENSTRUG00000014050	rbm47	100	83.533	ENSIPUG00000004743	rbm47	100	84.048	Ictalurus_punctatus
ENSTRUG00000014050	rbm47	100	73.790	ENSSTOG00000004727	RBM47	100	80.380	Ictidomys_tridecemlineatus
ENSTRUG00000014050	rbm47	98	75.779	ENSJJAG00000013823	Rbm47	100	74.875	Jaculus_jaculus
ENSTRUG00000014050	rbm47	100	87.416	ENSKMAG00000000084	rbm47	100	87.248	Kryptolebias_marmoratus
ENSTRUG00000014050	rbm47	100	90.169	ENSLBEG00000008436	rbm47	100	90.339	Labrus_bergylta
ENSTRUG00000014050	rbm47	100	77.441	ENSLACG00000007196	RBM47	100	77.852	Latimeria_chalumnae
ENSTRUG00000014050	rbm47	100	81.926	ENSLOCG00000012966	rbm47	95	82.462	Lepisosteus_oculatus
ENSTRUG00000014050	rbm47	100	76.271	ENSLAFG00000011998	RBM47	100	76.949	Loxodonta_africana
ENSTRUG00000014050	rbm47	98	84.746	ENSMFAG00000037967	RBM47	95	83.690	Macaca_fascicularis
ENSTRUG00000014050	rbm47	100	74.415	ENSMMUG00000012036	RBM47	100	83.420	Macaca_mulatta
ENSTRUG00000014050	rbm47	98	84.463	ENSMNEG00000040774	RBM47	95	83.422	Macaca_nemestrina
ENSTRUG00000014050	rbm47	100	83.175	ENSMLEG00000041432	RBM47	100	85.714	Mandrillus_leucophaeus
ENSTRUG00000014050	rbm47	100	88.889	ENSMAMG00000019143	rbm47	100	88.889	Mastacembelus_armatus
ENSTRUG00000014050	rbm47	100	87.664	ENSMZEG00005023659	rbm47	100	87.664	Maylandia_zebra
ENSTRUG00000014050	rbm47	100	76.167	ENSMGAG00000012226	RBM47	100	77.205	Meleagris_gallopavo
ENSTRUG00000014050	rbm47	100	81.167	ENSMAUG00000006493	Rbm47	100	82.278	Mesocricetus_auratus
ENSTRUG00000014050	rbm47	98	74.427	ENSMICG00000026417	RBM47	100	75.593	Microcebus_murinus
ENSTRUG00000014050	rbm47	100	81.383	ENSMOCG00000021170	Rbm47	100	81.646	Microtus_ochrogaster
ENSTRUG00000014050	rbm47	100	88.889	ENSMMOG00000007260	rbm47	100	88.889	Mola_mola
ENSTRUG00000014050	rbm47	100	76.421	ENSMODG00000007003	RBM47	100	76.923	Monodelphis_domestica
ENSTRUG00000014050	rbm47	100	72.509	ENSMODG00000020561	-	99	73.413	Monodelphis_domestica
ENSTRUG00000014050	rbm47	53	78.710	ENSMODG00000015426	-	97	78.710	Monodelphis_domestica
ENSTRUG00000014050	rbm47	100	90.614	ENSMALG00000005167	rbm47	100	90.614	Monopterus_albus
ENSTRUG00000014050	rbm47	100	81.383	MGP_CAROLIEiJ_G0027258	Rbm47	100	82.278	Mus_caroli
ENSTRUG00000014050	rbm47	100	81.649	ENSMUSG00000070780	Rbm47	100	82.278	Mus_musculus
ENSTRUG00000014050	rbm47	100	81.383	MGP_PahariEiJ_G0017040	Rbm47	100	82.278	Mus_pahari
ENSTRUG00000014050	rbm47	100	81.649	MGP_SPRETEiJ_G0028253	Rbm47	100	82.278	Mus_spretus
ENSTRUG00000014050	rbm47	100	73.913	ENSMPUG00000006177	RBM47	94	75.753	Mustela_putorius_furo
ENSTRUG00000014050	rbm47	99	75.639	ENSMLUG00000000889	RBM47	98	77.172	Myotis_lucifugus
ENSTRUG00000014050	rbm47	100	74.450	ENSNGAG00000003325	Rbm47	98	75.127	Nannospalax_galili
ENSTRUG00000014050	rbm47	100	87.685	ENSNBRG00000015092	rbm47	100	87.685	Neolamprologus_brichardi
ENSTRUG00000014050	rbm47	98	84.746	ENSNLEG00000017151	RBM47	95	83.690	Nomascus_leucogenys
ENSTRUG00000014050	rbm47	73	78.972	ENSMEUG00000009516	-	99	78.972	Notamacropus_eugenii
ENSTRUG00000014050	rbm47	75	84.583	ENSOPRG00000016507	-	75	84.583	Ochotona_princeps
ENSTRUG00000014050	rbm47	100	74.286	ENSODEG00000004873	RBM47	98	76.451	Octodon_degus
ENSTRUG00000014050	rbm47	100	87.171	ENSONIG00000009061	rbm47	100	87.171	Oreochromis_niloticus
ENSTRUG00000014050	rbm47	98	78.421	ENSOANG00000008978	RBM47	96	79.123	Ornithorhynchus_anatinus
ENSTRUG00000014050	rbm47	100	74.874	ENSOCUG00000012034	RBM47	100	76.214	Oryctolagus_cuniculus
ENSTRUG00000014050	rbm47	100	89.474	ENSORLG00000005847	rbm47	100	89.474	Oryzias_latipes
ENSTRUG00000014050	rbm47	100	89.643	ENSORLG00020005154	rbm47	100	89.643	Oryzias_latipes_hni
ENSTRUG00000014050	rbm47	100	89.304	ENSORLG00015000066	rbm47	100	89.304	Oryzias_latipes_hsok
ENSTRUG00000014050	rbm47	100	88.946	ENSOMEG00000010730	rbm47	100	88.946	Oryzias_melastigma
ENSTRUG00000014050	rbm47	98	75.606	ENSOGAG00000029367	-	100	75.960	Otolemur_garnettii
ENSTRUG00000014050	rbm47	100	68.855	ENSOGAG00000025193	-	100	70.084	Otolemur_garnettii
ENSTRUG00000014050	rbm47	100	66.780	ENSOARG00000012711	RBM47	98	69.165	Ovis_aries
ENSTRUG00000014050	rbm47	100	75.338	ENSPPAG00000029763	RBM47	95	83.690	Pan_paniscus
ENSTRUG00000014050	rbm47	100	80.267	ENSPPRG00000012873	RBM47	100	83.467	Panthera_pardus
ENSTRUG00000014050	rbm47	86	73.757	ENSPTIG00000017046	RBM47	100	75.149	Panthera_tigris_altaica
ENSTRUG00000014050	rbm47	98	84.746	ENSPTRG00000016006	RBM47	95	83.690	Pan_troglodytes
ENSTRUG00000014050	rbm47	98	84.746	ENSPANG00000005980	RBM47	95	83.690	Papio_anubis
ENSTRUG00000014050	rbm47	99	80.035	ENSPKIG00000005037	rbm47	100	78.167	Paramormyrops_kingsleyae
ENSTRUG00000014050	rbm47	98	76.174	ENSPKIG00000013431	RBM47	100	75.809	Paramormyrops_kingsleyae
ENSTRUG00000014050	rbm47	88	79.017	ENSPSIG00000017516	RBM47	97	79.017	Pelodiscus_sinensis
ENSTRUG00000014050	rbm47	100	89.249	ENSPMGG00000018540	rbm47	100	89.249	Periophthalmus_magnuspinnatus
ENSTRUG00000014050	rbm47	100	81.117	ENSPEMG00000011088	Rbm47	100	75.333	Peromyscus_maniculatus_bairdii
ENSTRUG00000014050	rbm47	99	89.501	ENSPFOG00000007997	rbm47	100	86.252	Poecilia_formosa
ENSTRUG00000014050	rbm47	99	89.483	ENSPLAG00000002072	rbm47	100	86.230	Poecilia_latipinna
ENSTRUG00000014050	rbm47	100	89.002	ENSPMEG00000017492	rbm47	100	89.002	Poecilia_mexicana
ENSTRUG00000014050	rbm47	99	88.966	ENSPREG00000008456	rbm47	100	85.738	Poecilia_reticulata
ENSTRUG00000014050	rbm47	99	66.724	ENSPPYG00000014688	RBM47	99	67.065	Pongo_abelii
ENSTRUG00000014050	rbm47	81	82.732	ENSPCAG00000011879	RBM47	79	84.278	Procavia_capensis
ENSTRUG00000014050	rbm47	98	74.695	ENSPCOG00000023451	RBM47	100	75.379	Propithecus_coquereli
ENSTRUG00000014050	rbm47	100	73.456	ENSPVAG00000003812	RBM47	100	75.459	Pteropus_vampyrus
ENSTRUG00000014050	rbm47	100	87.234	ENSPNYG00000022868	rbm47	100	87.234	Pundamilia_nyererei
ENSTRUG00000014050	rbm47	98	84.896	ENSPNAG00000007940	rbm47	95	85.243	Pygocentrus_nattereri
ENSTRUG00000014050	rbm47	100	74.247	ENSRNOG00000002408	Rbm47	100	75.920	Rattus_norvegicus
ENSTRUG00000014050	rbm47	100	81.551	ENSRBIG00000039601	RBM47	95	83.422	Rhinopithecus_bieti
ENSTRUG00000014050	rbm47	100	81.551	ENSRROG00000044696	RBM47	95	83.422	Rhinopithecus_roxellana
ENSTRUG00000014050	rbm47	100	73.883	ENSSBOG00000028475	RBM47	94	84.699	Saimiri_boliviensis_boliviensis
ENSTRUG00000014050	rbm47	100	76.846	ENSSHAG00000017576	RBM47	100	77.387	Sarcophilus_harrisii
ENSTRUG00000014050	rbm47	99	79.896	ENSSFOG00015024101	RBM47	97	79.896	Scleropages_formosus
ENSTRUG00000014050	rbm47	98	79.094	ENSSFOG00015012445	rbm47	100	76.285	Scleropages_formosus
ENSTRUG00000014050	rbm47	100	87.748	ENSSMAG00000009744	rbm47	100	89.796	Scophthalmus_maximus
ENSTRUG00000014050	rbm47	100	91.892	ENSSDUG00000022684	rbm47	100	91.892	Seriola_dumerili
ENSTRUG00000014050	rbm47	100	92.334	ENSSLDG00000003109	rbm47	100	92.334	Seriola_lalandi_dorsalis
ENSTRUG00000014050	rbm47	85	77.955	ENSSARG00000001735	RBM47	74	80.587	Sorex_araneus
ENSTRUG00000014050	rbm47	100	82.620	ENSSPUG00000007515	RBM47	100	76.094	Sphenodon_punctatus
ENSTRUG00000014050	rbm47	100	92.177	ENSSPAG00000001257	rbm47	100	92.177	Stegastes_partitus
ENSTRUG00000014050	rbm47	100	79.787	ENSSSCG00000008796	RBM47	100	76.471	Sus_scrofa
ENSTRUG00000014050	rbm47	100	76.047	ENSTGUG00000008705	RBM47	100	77.052	Taeniopygia_guttata
ENSTRUG00000014050	rbm47	100	91.528	ENSTNIG00000006127	rbm47	100	91.528	Tetraodon_nigroviridis
ENSTRUG00000014050	rbm47	78	80.214	ENSTBEG00000001607	RBM47	75	81.370	Tupaia_belangeri
ENSTRUG00000014050	rbm47	100	74.579	ENSTTRG00000002839	RBM47	98	77.094	Tursiops_truncatus
ENSTRUG00000014050	rbm47	100	75.251	ENSUAMG00000021346	RBM47	100	76.087	Ursus_americanus
ENSTRUG00000014050	rbm47	55	84.127	ENSVPAG00000000641	-	56	80.690	Vicugna_pacos
ENSTRUG00000014050	rbm47	98	75.218	ENSVVUG00000014774	RBM47	100	75.209	Vulpes_vulpes
ENSTRUG00000014050	rbm47	100	75.418	ENSXETG00000012802	rbm47	100	75.753	Xenopus_tropicalis
ENSTRUG00000014050	rbm47	63	92.935	ENSXCOG00000000780	rbm47	100	66.781	Xiphophorus_couchianus
ENSTRUG00000014050	rbm47	100	88.265	ENSXMAG00000009874	rbm47	100	88.435	Xiphophorus_maculatus