EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000014067 (Gene tree)
Gene ID: 445892
Gene Symbol: snd1
Alias: sn4tdr
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 90824 bases
Position: chr18:4291954-4382777
Accession: 445892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000035991	TUDOR	PF00567.24	6.7e-27	1	1
ENSTRUP00000035992	TUDOR	PF00567.24	6.7e-27	1	1
ENSTRUP00000053996	TUDOR	PF00567.24	7.6e-27	1	1
ENSTRUP00000047914	TUDOR	PF00567.24	8.1e-27	1	1
ENSTRUP00000035991	SNase	PF00565.17	1.6e-64	1	4
ENSTRUP00000035991	SNase	PF00565.17	1.6e-64	2	4
ENSTRUP00000035991	SNase	PF00565.17	1.6e-64	3	4
ENSTRUP00000035991	SNase	PF00565.17	1.6e-64	4	4
ENSTRUP00000035992	SNase	PF00565.17	1.6e-64	1	4
ENSTRUP00000035992	SNase	PF00565.17	1.6e-64	2	4
ENSTRUP00000035992	SNase	PF00565.17	1.6e-64	3	4
ENSTRUP00000035992	SNase	PF00565.17	1.6e-64	4	4
ENSTRUP00000053996	SNase	PF00565.17	1.9e-53	1	3
ENSTRUP00000053996	SNase	PF00565.17	1.9e-53	2	3
ENSTRUP00000053996	SNase	PF00565.17	1.9e-53	3	3
ENSTRUP00000047914	SNase	PF00565.17	1.2e-50	1	3
ENSTRUP00000047914	SNase	PF00565.17	1.2e-50	2	3
ENSTRUP00000047914	SNase	PF00565.17	1.2e-50	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000036122	-	4085	-	ENSTRUP00000035992	911 (aa)	-	H2UGC1
ENSTRUT00000036121	-	3927	-	ENSTRUP00000035991	911 (aa)	-	H2UGC0
ENSTRUT00000054245	-	4286	-	ENSTRUP00000053996	978 (aa)	-	-
ENSTRUT00000054894	-	4082	-	ENSTRUP00000047914	910 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000014067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000014067's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000014067	snd1	98	83.557	ENSG00000197157	SND1	99	83.040	Homo_sapiens
ENSTRUG00000014067	snd1	100	93.085	ENSAPOG00000017599	snd1	100	93.624	Acanthochromis_polyacanthus
ENSTRUG00000014067	snd1	100	82.495	ENSAMEG00000004664	SND1	94	82.495	Ailuropoda_melanoleuca
ENSTRUG00000014067	snd1	100	88.474	ENSACIG00000003551	snd1	100	88.571	Amphilophus_citrinellus
ENSTRUG00000014067	snd1	100	93.414	ENSAOCG00000014166	snd1	100	94.128	Amphiprion_ocellaris
ENSTRUG00000014067	snd1	100	93.194	ENSAPEG00000007067	snd1	100	93.960	Amphiprion_percula
ENSTRUG00000014067	snd1	98	91.834	ENSATEG00000018475	snd1	89	92.573	Anabas_testudineus
ENSTRUG00000014067	snd1	98	83.669	ENSANAG00000034463	SND1	99	85.098	Aotus_nancymaae
ENSTRUG00000014067	snd1	100	91.987	ENSACLG00000022897	snd1	100	93.960	Astatotilapia_calliptera
ENSTRUG00000014067	snd1	99	89.011	ENSAMXG00000016318	snd1	99	89.130	Astyanax_mexicanus
ENSTRUG00000014067	snd1	98	83.781	ENSBTAG00000010692	SND1	99	83.755	Bos_taurus
ENSTRUG00000014067	snd1	99	46.838	WBGene00006626	tsn-1	99	46.945	Caenorhabditis_elegans
ENSTRUG00000014067	snd1	98	83.669	ENSCJAG00000017668	SND1	99	85.098	Callithrix_jacchus
ENSTRUG00000014067	snd1	100	82.785	ENSCAFG00000001700	SND1	100	82.785	Canis_familiaris
ENSTRUG00000014067	snd1	100	82.785	ENSCAFG00020021639	SND1	100	82.785	Canis_lupus_dingo
ENSTRUG00000014067	snd1	98	83.669	ENSCHIG00000023390	SND1	98	85.098	Capra_hircus
ENSTRUG00000014067	snd1	71	87.500	ENSTSYG00000004979	SND1	97	87.500	Carlito_syrichta
ENSTRUG00000014067	snd1	86	86.111	ENSCAPG00000010677	SND1	90	86.111	Cavia_aperea
ENSTRUG00000014067	snd1	98	83.333	ENSCPOG00000006251	SND1	99	83.755	Cavia_porcellus
ENSTRUG00000014067	snd1	98	83.669	ENSCCAG00000036847	SND1	98	84.706	Cebus_capucinus
ENSTRUG00000014067	snd1	98	83.893	ENSCATG00000035214	SND1	99	85.098	Cercocebus_atys
ENSTRUG00000014067	snd1	99	83.537	ENSCLAG00000011796	SND1	98	87.143	Chinchilla_lanigera
ENSTRUG00000014067	snd1	98	83.893	ENSCSAG00000010182	SND1	99	83.394	Chlorocebus_sabaeus
ENSTRUG00000014067	snd1	77	73.267	ENSCHOG00000002218	SND1	86	73.267	Choloepus_hoffmanni
ENSTRUG00000014067	snd1	100	82.437	ENSCPBG00000018094	SND1	100	82.500	Chrysemys_picta_bellii
ENSTRUG00000014067	snd1	98	55.482	ENSCING00000000524	-	99	54.832	Ciona_intestinalis
ENSTRUG00000014067	snd1	99	56.455	ENSCSAVG00000008807	-	99	56.455	Ciona_savignyi
ENSTRUG00000014067	snd1	98	83.893	ENSCANG00000035119	SND1	99	83.394	Colobus_angolensis_palliatus
ENSTRUG00000014067	snd1	98	83.333	ENSCGRG00001022514	Snd1	97	86.429	Cricetulus_griseus_chok1gshd
ENSTRUG00000014067	snd1	97	83.296	ENSCGRG00000012277	Snd1	99	85.098	Cricetulus_griseus_crigri
ENSTRUG00000014067	snd1	100	91.438	ENSCSEG00000008661	snd1	100	91.946	Cynoglossus_semilaevis
ENSTRUG00000014067	snd1	100	92.536	ENSCVAG00000010316	snd1	100	93.792	Cyprinodon_variegatus
ENSTRUG00000014067	snd1	100	88.499	ENSDARG00000006766	snd1	99	93.227	Danio_rerio
ENSTRUG00000014067	snd1	97	81.215	ENSDNOG00000006795	SND1	100	81.605	Dasypus_novemcinctus
ENSTRUG00000014067	snd1	98	83.333	ENSDORG00000000336	Snd1	99	82.819	Dipodomys_ordii
ENSTRUG00000014067	snd1	98	50.054	FBgn0035121	Tudor-SN	99	49.571	Drosophila_melanogaster
ENSTRUG00000014067	snd1	90	86.111	ENSETEG00000000375	SND1	92	86.111	Echinops_telfairi
ENSTRUG00000014067	snd1	57	70.909	ENSEBUG00000014201	-	84	76.087	Eptatretus_burgeri
ENSTRUG00000014067	snd1	98	82.398	ENSEASG00005008513	SND1	99	82.671	Equus_asinus_asinus
ENSTRUG00000014067	snd1	98	83.557	ENSECAG00000011451	SND1	99	83.040	Equus_caballus
ENSTRUG00000014067	snd1	100	73.136	ENSEEUG00000014737	SND1	99	81.949	Erinaceus_europaeus
ENSTRUG00000014067	snd1	99	87.816	ENSELUG00000001805	snd1	96	88.945	Esox_lucius
ENSTRUG00000014067	snd1	100	82.675	ENSFCAG00000008289	SND1	100	82.675	Felis_catus
ENSTRUG00000014067	snd1	98	83.445	ENSFDAG00000015881	SND1	99	83.394	Fukomys_damarensis
ENSTRUG00000014067	snd1	100	90.011	ENSFHEG00000004093	snd1	99	92.553	Fundulus_heteroclitus
ENSTRUG00000014067	snd1	75	82.486	ENSGMOG00000018932	snd1	66	82.486	Gadus_morhua
ENSTRUG00000014067	snd1	100	92.645	ENSGAFG00000008421	snd1	100	93.960	Gambusia_affinis
ENSTRUG00000014067	snd1	89	97.222	ENSGACG00000019793	snd1	90	97.222	Gasterosteus_aculeatus
ENSTRUG00000014067	snd1	98	83.781	ENSGGOG00000009614	SND1	99	85.098	Gorilla_gorilla
ENSTRUG00000014067	snd1	100	91.987	ENSHBUG00000019135	snd1	100	93.792	Haplochromis_burtoni
ENSTRUG00000014067	snd1	98	83.221	ENSHGLG00000003618	SND1	97	86.786	Heterocephalus_glaber_female
ENSTRUG00000014067	snd1	99	82.709	ENSHGLG00100012449	SND1	99	83.032	Heterocephalus_glaber_male
ENSTRUG00000014067	snd1	100	94.444	ENSHCOG00000005266	snd1	100	91.218	Hippocampus_comes
ENSTRUG00000014067	snd1	99	88.035	ENSIPUG00000013279	snd1	99	88.035	Ictalurus_punctatus
ENSTRUG00000014067	snd1	98	83.557	ENSSTOG00000002140	SND1	99	83.394	Ictidomys_tridecemlineatus
ENSTRUG00000014067	snd1	98	83.445	ENSJJAG00000009561	Snd1	99	82.930	Jaculus_jaculus
ENSTRUG00000014067	snd1	100	92.426	ENSKMAG00000016997	snd1	100	93.792	Kryptolebias_marmoratus
ENSTRUG00000014067	snd1	100	91.548	ENSLBEG00000013563	snd1	97	97.222	Labrus_bergylta
ENSTRUG00000014067	snd1	99	91.667	ENSLOCG00000015537	snd1	100	87.065	Lepisosteus_oculatus
ENSTRUG00000014067	snd1	99	83.040	ENSLAFG00000009696	SND1	99	83.040	Loxodonta_africana
ENSTRUG00000014067	snd1	98	83.893	ENSMFAG00000038114	SND1	99	85.098	Macaca_fascicularis
ENSTRUG00000014067	snd1	98	83.893	ENSMMUG00000015432	SND1	96	87.365	Macaca_mulatta
ENSTRUG00000014067	snd1	98	83.893	ENSMNEG00000039808	SND1	100	85.156	Macaca_nemestrina
ENSTRUG00000014067	snd1	98	83.781	ENSMLEG00000029040	SND1	100	85.156	Mandrillus_leucophaeus
ENSTRUG00000014067	snd1	100	91.767	ENSMAMG00000011739	snd1	100	92.953	Mastacembelus_armatus
ENSTRUG00000014067	snd1	100	91.987	ENSMZEG00005005681	snd1	100	93.960	Maylandia_zebra
ENSTRUG00000014067	snd1	98	83.669	ENSMICG00000000097	SND1	99	83.150	Microcebus_murinus
ENSTRUG00000014067	snd1	98	83.669	ENSMOCG00000005040	Snd1	99	83.394	Microtus_ochrogaster
ENSTRUG00000014067	snd1	100	97.222	ENSMMOG00000001795	snd1	100	93.289	Mola_mola
ENSTRUG00000014067	snd1	98	83.221	ENSMODG00000015182	SND1	99	82.709	Monodelphis_domestica
ENSTRUG00000014067	snd1	100	91.667	ENSMALG00000012071	snd1	100	92.450	Monopterus_albus
ENSTRUG00000014067	snd1	98	83.221	MGP_CAROLIEiJ_G0028159	Snd1	99	86.738	Mus_caroli
ENSTRUG00000014067	snd1	98	82.998	ENSMUSG00000001424	Snd1	99	83.904	Mus_musculus
ENSTRUG00000014067	snd1	98	83.221	MGP_PahariEiJ_G0021917	Snd1	100	86.380	Mus_pahari
ENSTRUG00000014067	snd1	98	83.221	MGP_SPRETEiJ_G0029159	Snd1	99	83.904	Mus_spretus
ENSTRUG00000014067	snd1	100	82.456	ENSMPUG00000006545	SND1	100	82.456	Mustela_putorius_furo
ENSTRUG00000014067	snd1	97	82.497	ENSMLUG00000017130	SND1	99	84.314	Myotis_lucifugus
ENSTRUG00000014067	snd1	98	83.557	ENSNGAG00000011186	Snd1	99	83.394	Nannospalax_galili
ENSTRUG00000014067	snd1	100	91.767	ENSNBRG00000006681	snd1	100	93.624	Neolamprologus_brichardi
ENSTRUG00000014067	snd1	99	83.260	ENSNLEG00000012263	SND1	98	87.455	Nomascus_leucogenys
ENSTRUG00000014067	snd1	91	86.111	ENSOPRG00000013405	SND1	92	86.111	Ochotona_princeps
ENSTRUG00000014067	snd1	99	83.315	ENSODEG00000011502	SND1	100	82.918	Octodon_degus
ENSTRUG00000014067	snd1	100	91.767	ENSONIG00000011481	snd1	97	93.624	Oreochromis_niloticus
ENSTRUG00000014067	snd1	98	82.584	ENSOANG00000000817	SND1	99	81.711	Ornithorhynchus_anatinus
ENSTRUG00000014067	snd1	100	82.237	ENSOCUG00000001620	SND1	100	82.237	Oryctolagus_cuniculus
ENSTRUG00000014067	snd1	100	90.779	ENSORLG00000015201	snd1	100	91.611	Oryzias_latipes
ENSTRUG00000014067	snd1	100	97.222	ENSORLG00020013991	snd1	100	91.779	Oryzias_latipes_hni
ENSTRUG00000014067	snd1	100	97.222	ENSORLG00015012436	snd1	100	91.779	Oryzias_latipes_hsok
ENSTRUG00000014067	snd1	100	91.438	ENSOMEG00000006406	snd1	100	91.779	Oryzias_melastigma
ENSTRUG00000014067	snd1	98	83.594	ENSOGAG00000013356	SND1	94	83.394	Otolemur_garnettii
ENSTRUG00000014067	snd1	97	81.172	ENSOARG00000002149	SND1	100	85.156	Ovis_aries
ENSTRUG00000014067	snd1	99	82.759	ENSPPAG00000042947	SND1	99	85.098	Pan_paniscus
ENSTRUG00000014067	snd1	100	82.675	ENSPPRG00000004494	SND1	100	82.675	Panthera_pardus
ENSTRUG00000014067	snd1	100	82.566	ENSPTIG00000014214	SND1	100	82.566	Panthera_tigris_altaica
ENSTRUG00000014067	snd1	99	82.759	ENSPTRG00000023911	SND1	99	85.098	Pan_troglodytes
ENSTRUG00000014067	snd1	97	83.860	ENSPANG00000011997	SND1	99	85.098	Papio_anubis
ENSTRUG00000014067	snd1	99	85.226	ENSPKIG00000023494	snd1	99	84.733	Paramormyrops_kingsleyae
ENSTRUG00000014067	snd1	92	91.148	ENSPMGG00000003629	snd1	100	91.148	Periophthalmus_magnuspinnatus
ENSTRUG00000014067	snd1	98	83.557	ENSPEMG00000010240	Snd1	99	83.394	Peromyscus_maniculatus_bairdii
ENSTRUG00000014067	snd1	97	73.589	ENSPMAG00000007915	-	99	77.043	Petromyzon_marinus
ENSTRUG00000014067	snd1	98	83.781	ENSPCIG00000011561	SND1	99	83.260	Phascolarctos_cinereus
ENSTRUG00000014067	snd1	100	92.097	ENSPFOG00000001557	snd1	100	93.289	Poecilia_formosa
ENSTRUG00000014067	snd1	100	92.316	ENSPLAG00000018459	snd1	97	93.456	Poecilia_latipinna
ENSTRUG00000014067	snd1	100	92.536	ENSPMEG00000006803	snd1	100	93.456	Poecilia_mexicana
ENSTRUG00000014067	snd1	100	92.316	ENSPREG00000002189	snd1	100	93.121	Poecilia_reticulata
ENSTRUG00000014067	snd1	91	86.111	ENSPPYG00000017972	SND1	99	86.111	Pongo_abelii
ENSTRUG00000014067	snd1	89	86.111	ENSPCAG00000011305	SND1	99	81.949	Procavia_capensis
ENSTRUG00000014067	snd1	98	83.781	ENSPCOG00000026791	SND1	100	84.766	Propithecus_coquereli
ENSTRUG00000014067	snd1	98	81.767	ENSPVAG00000013945	SND1	99	82.310	Pteropus_vampyrus
ENSTRUG00000014067	snd1	100	91.877	ENSPNYG00000000932	snd1	100	93.792	Pundamilia_nyererei
ENSTRUG00000014067	snd1	99	88.352	ENSPNAG00000001206	snd1	92	97.222	Pygocentrus_nattereri
ENSTRUG00000014067	snd1	98	83.110	ENSRNOG00000031173	Snd1	100	82.812	Rattus_norvegicus
ENSTRUG00000014067	snd1	70	87.453	ENSRBIG00000027782	-	93	89.300	Rhinopithecus_bieti
ENSTRUG00000014067	snd1	98	83.893	ENSRROG00000033020	SND1	99	83.394	Rhinopithecus_roxellana
ENSTRUG00000014067	snd1	98	83.669	ENSSBOG00000032461	SND1	99	85.098	Saimiri_boliviensis_boliviensis
ENSTRUG00000014067	snd1	98	80.449	ENSSHAG00000015359	SND1	100	81.467	Sarcophilus_harrisii
ENSTRUG00000014067	snd1	98	86.696	ENSSFOG00015001103	snd1	99	85.839	Scleropages_formosus
ENSTRUG00000014067	snd1	100	92.097	ENSSMAG00000001932	snd1	92	97.222	Scophthalmus_maximus
ENSTRUG00000014067	snd1	100	92.755	ENSSDUG00000002699	snd1	94	93.289	Seriola_dumerili
ENSTRUG00000014067	snd1	100	85.401	ENSSLDG00000001950	snd1	100	86.577	Seriola_lalandi_dorsalis
ENSTRUG00000014067	snd1	86	79.381	ENSSARG00000004877	SND1	92	84.314	Sorex_araneus
ENSTRUG00000014067	snd1	72	77.685	ENSSPUG00000017586	SND1	97	83.529	Sphenodon_punctatus
ENSTRUG00000014067	snd1	73	92.893	ENSSPAG00000021398	snd1	99	95.290	Stegastes_partitus
ENSTRUG00000014067	snd1	98	83.669	ENSSSCG00000016590	SND1	99	83.755	Sus_scrofa
ENSTRUG00000014067	snd1	100	96.926	ENSTNIG00000011019	snd1	100	97.500	Tetraodon_nigroviridis
ENSTRUG00000014067	snd1	93	78.000	ENSTBEG00000003999	SND1	100	84.314	Tupaia_belangeri
ENSTRUG00000014067	snd1	98	79.418	ENSTTRG00000006059	SND1	99	81.879	Tursiops_truncatus
ENSTRUG00000014067	snd1	87	82.319	ENSUAMG00000005604	-	93	82.319	Ursus_americanus
ENSTRUG00000014067	snd1	65	87.879	ENSUAMG00000002820	-	89	87.879	Ursus_americanus
ENSTRUG00000014067	snd1	100	82.675	ENSUMAG00000005960	SND1	100	82.675	Ursus_maritimus
ENSTRUG00000014067	snd1	77	86.111	ENSVPAG00000008302	SND1	74	86.111	Vicugna_pacos
ENSTRUG00000014067	snd1	100	82.675	ENSVVUG00000007226	SND1	100	82.675	Vulpes_vulpes
ENSTRUG00000014067	snd1	97	79.369	ENSXETG00000023043	snd1	100	83.922	Xenopus_tropicalis
ENSTRUG00000014067	snd1	92	90.143	ENSXCOG00000013629	snd1	99	90.336	Xiphophorus_couchianus
ENSTRUG00000014067	snd1	100	92.865	ENSXMAG00000011469	snd1	100	94.128	Xiphophorus_maculatus