EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000014094 (Gene tree)
Gene ID: 101068027
Gene Symbol: smarca5
Alias: SWI/SNF related|matrix associated|actin dependent regulator of chromatin A5|chunp6878|fb26d12|fb49g04|im:7146484|wu:fb26d12|wu:fb49g04|zgc:158434
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 6851 bases
Position: chr17:8077508-8084358
Accession: 101068027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000036063	ResIII	PF04851.15	4.1e-11	1	1
ENSTRUP00000036063	DEAD	PF00270.29	3.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000036194	-	3852	XM_011612946	ENSTRUP00000036063	1034 (aa)	XP_011611248	H2UGJ2

Gene Model

Click here to download ENSTRUG00000014094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000014094's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000014094	smarca5	58	38.932	ENSTRUG00000006682	chd8	70	40.863

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000014094	smarca5	95	82.727	ENSG00000102038	SMARCA1	93	83.401	Homo_sapiens
ENSTRUG00000014094	smarca5	100	96.139	ENSAPOG00000016035	smarca5	100	96.622	Acanthochromis_polyacanthus
ENSTRUG00000014094	smarca5	95	81.737	ENSAMEG00000015218	SMARCA1	93	82.294	Ailuropoda_melanoleuca
ENSTRUG00000014094	smarca5	87	97.003	ENSACIG00000016982	smarca5	100	97.003	Amphilophus_citrinellus
ENSTRUG00000014094	smarca5	100	96.139	ENSAOCG00000015578	smarca5	100	96.622	Amphiprion_ocellaris
ENSTRUG00000014094	smarca5	100	96.139	ENSAPEG00000011117	smarca5	100	96.622	Amphiprion_percula
ENSTRUG00000014094	smarca5	100	96.329	ENSATEG00000012894	smarca5	100	96.329	Anabas_testudineus
ENSTRUG00000014094	smarca5	95	84.012	ENSAPLG00000013149	SMARCA1	99	84.012	Anas_platyrhynchos
ENSTRUG00000014094	smarca5	98	82.307	ENSACAG00000011376	SMARCA1	94	84.725	Anolis_carolinensis
ENSTRUG00000014094	smarca5	95	78.283	ENSANAG00000023098	SMARCA1	93	78.921	Aotus_nancymaae
ENSTRUG00000014094	smarca5	100	96.139	ENSACLG00000025356	smarca5	100	96.139	Astatotilapia_calliptera
ENSTRUG00000014094	smarca5	90	84.318	ENSAMXG00000011227	smarca1	99	85.525	Astyanax_mexicanus
ENSTRUG00000014094	smarca5	98	91.797	ENSAMXG00000005709	smarca5	97	92.567	Astyanax_mexicanus
ENSTRUG00000014094	smarca5	95	83.078	ENSBTAG00000002292	SMARCA1	91	83.246	Bos_taurus
ENSTRUG00000014094	smarca5	96	62.451	WBGene00002169	isw-1	95	63.169	Caenorhabditis_elegans
ENSTRUG00000014094	smarca5	95	82.846	ENSCJAG00000002868	SMARCA1	93	83.401	Callithrix_jacchus
ENSTRUG00000014094	smarca5	95	73.188	ENSCAFG00000018673	SMARCA1	99	74.706	Canis_familiaris
ENSTRUG00000014094	smarca5	95	82.929	ENSCAFG00020001751	SMARCA1	93	83.503	Canis_lupus_dingo
ENSTRUG00000014094	smarca5	95	82.776	ENSCHIG00000009837	SMARCA1	92	83.096	Capra_hircus
ENSTRUG00000014094	smarca5	98	80.019	ENSTSYG00000004240	SMARCA1	94	84.161	Carlito_syrichta
ENSTRUG00000014094	smarca5	95	82.028	ENSCPOG00000013601	SMARCA1	93	82.591	Cavia_porcellus
ENSTRUG00000014094	smarca5	95	80.101	ENSCCAG00000030817	SMARCA1	93	80.754	Cebus_capucinus
ENSTRUG00000014094	smarca5	95	81.737	ENSCATG00000015921	SMARCA1	93	82.394	Cercocebus_atys
ENSTRUG00000014094	smarca5	95	82.323	ENSCLAG00000002171	SMARCA1	93	82.892	Chinchilla_lanigera
ENSTRUG00000014094	smarca5	95	82.727	ENSCSAG00000008460	SMARCA1	93	83.401	Chlorocebus_sabaeus
ENSTRUG00000014094	smarca5	95	84.093	ENSCPBG00000001146	SMARCA1	93	84.420	Chrysemys_picta_bellii
ENSTRUG00000014094	smarca5	96	73.831	ENSCING00000004110	swi/snf	99	73.831	Ciona_intestinalis
ENSTRUG00000014094	smarca5	96	73.241	ENSCSAVG00000004620	-	99	75.839	Ciona_savignyi
ENSTRUG00000014094	smarca5	95	82.828	ENSCANG00000007183	SMARCA1	93	83.503	Colobus_angolensis_palliatus
ENSTRUG00000014094	smarca5	95	81.919	ENSCGRG00001010776	Smarca1	93	82.485	Cricetulus_griseus_chok1gshd
ENSTRUG00000014094	smarca5	95	81.092	ENSCGRG00000015301	Smarca1	94	82.911	Cricetulus_griseus_crigri
ENSTRUG00000014094	smarca5	100	95.845	ENSCSEG00000000328	smarca5	100	95.845	Cynoglossus_semilaevis
ENSTRUG00000014094	smarca5	100	94.976	ENSCVAG00000008668	smarca5	100	94.976	Cyprinodon_variegatus
ENSTRUG00000014094	smarca5	99	90.997	ENSDARG00000052348	smarca5	99	90.883	Danio_rerio
ENSTRUG00000014094	smarca5	94	82.371	ENSDARG00000012776	smarca1	97	82.371	Danio_rerio
ENSTRUG00000014094	smarca5	95	82.383	ENSDNOG00000004315	SMARCA1	91	84.199	Dasypus_novemcinctus
ENSTRUG00000014094	smarca5	96	81.891	ENSDORG00000009270	Smarca1	90	84.517	Dipodomys_ordii
ENSTRUG00000014094	smarca5	95	74.294	FBgn0011604	Iswi	99	72.464	Drosophila_melanogaster
ENSTRUG00000014094	smarca5	78	81.818	ENSETEG00000017426	SMARCA1	83	81.818	Echinops_telfairi
ENSTRUG00000014094	smarca5	97	80.338	ENSEBUG00000001239	smarca5	96	82.088	Eptatretus_burgeri
ENSTRUG00000014094	smarca5	95	79.049	ENSEASG00005008218	SMARCA1	99	79.656	Equus_asinus_asinus
ENSTRUG00000014094	smarca5	95	82.828	ENSECAG00000012106	SMARCA1	92	83.401	Equus_caballus
ENSTRUG00000014094	smarca5	76	84.437	ENSEEUG00000014927	SMARCA1	80	84.437	Erinaceus_europaeus
ENSTRUG00000014094	smarca5	94	84.086	ENSELUG00000010515	smarca1	95	85.142	Esox_lucius
ENSTRUG00000014094	smarca5	95	82.828	ENSFCAG00000018496	SMARCA1	93	83.401	Felis_catus
ENSTRUG00000014094	smarca5	88	85.120	ENSFALG00000000209	SMARCA1	98	85.120	Ficedula_albicollis
ENSTRUG00000014094	smarca5	93	82.311	ENSFDAG00000009818	SMARCA1	94	83.037	Fukomys_damarensis
ENSTRUG00000014094	smarca5	100	94.455	ENSFHEG00000007687	smarca5	100	93.977	Fundulus_heteroclitus
ENSTRUG00000014094	smarca5	96	82.154	ENSGALG00000008431	SMARCA1	95	85.162	Gallus_gallus
ENSTRUG00000014094	smarca5	100	95.652	ENSGAFG00000017731	smarca5	100	95.652	Gambusia_affinis
ENSTRUG00000014094	smarca5	94	84.671	ENSGAGG00000023575	SMARCA1	99	84.671	Gopherus_agassizii
ENSTRUG00000014094	smarca5	74	78.827	ENSGGOG00000012841	-	92	79.854	Gorilla_gorilla
ENSTRUG00000014094	smarca5	95	81.818	ENSHGLG00000003080	SMARCA1	93	82.383	Heterocephalus_glaber_female
ENSTRUG00000014094	smarca5	95	81.325	ENSHGLG00100001102	SMARCA1	99	81.883	Heterocephalus_glaber_male
ENSTRUG00000014094	smarca5	100	94.589	ENSHCOG00000005458	smarca5	100	95.656	Hippocampus_comes
ENSTRUG00000014094	smarca5	96	81.927	ENSIPUG00000016905	Smarca1	99	83.503	Ictalurus_punctatus
ENSTRUG00000014094	smarca5	100	89.971	ENSIPUG00000005229	SMARCA5	99	92.715	Ictalurus_punctatus
ENSTRUG00000014094	smarca5	97	81.710	ENSSTOG00000014524	SMARCA1	98	81.089	Ictidomys_tridecemlineatus
ENSTRUG00000014094	smarca5	95	81.608	ENSJJAG00000002593	Smarca1	93	82.168	Jaculus_jaculus
ENSTRUG00000014094	smarca5	100	95.362	ENSKMAG00000003777	smarca5	100	95.362	Kryptolebias_marmoratus
ENSTRUG00000014094	smarca5	94	95.189	ENSLBEG00000013295	SMARCA1	100	96.962	Labrus_bergylta
ENSTRUG00000014094	smarca5	100	95.072	ENSLBEG00000018112	smarca5	100	95.072	Labrus_bergylta
ENSTRUG00000014094	smarca5	95	84.913	ENSLACG00000016697	SMARCA1	96	85.246	Latimeria_chalumnae
ENSTRUG00000014094	smarca5	94	85.744	ENSLOCG00000014591	smarca1	95	85.744	Lepisosteus_oculatus
ENSTRUG00000014094	smarca5	96	81.175	ENSLAFG00000000896	SMARCA1	98	82.186	Loxodonta_africana
ENSTRUG00000014094	smarca5	95	82.727	ENSMFAG00000002117	SMARCA1	94	84.339	Macaca_fascicularis
ENSTRUG00000014094	smarca5	95	81.737	ENSMMUG00000008818	SMARCA1	97	84.722	Macaca_mulatta
ENSTRUG00000014094	smarca5	95	81.737	ENSMNEG00000041768	SMARCA1	94	84.339	Macaca_nemestrina
ENSTRUG00000014094	smarca5	95	82.727	ENSMLEG00000043198	SMARCA1	93	83.401	Mandrillus_leucophaeus
ENSTRUG00000014094	smarca5	100	95.861	ENSMAMG00000014294	smarca5	100	95.958	Mastacembelus_armatus
ENSTRUG00000014094	smarca5	100	96.139	ENSMZEG00005009369	smarca5	100	96.139	Maylandia_zebra
ENSTRUG00000014094	smarca5	95	82.998	ENSMGAG00000007042	SMARCA1	98	82.998	Meleagris_gallopavo
ENSTRUG00000014094	smarca5	93	82.286	ENSMAUG00000008133	Smarca1	91	82.408	Mesocricetus_auratus
ENSTRUG00000014094	smarca5	95	83.131	ENSMICG00000015768	SMARCA1	93	83.707	Microcebus_murinus
ENSTRUG00000014094	smarca5	95	81.407	ENSMOCG00000009464	Smarca1	93	81.966	Microtus_ochrogaster
ENSTRUG00000014094	smarca5	96	95.267	ENSMMOG00000005547	smarca5	100	95.267	Mola_mola
ENSTRUG00000014094	smarca5	95	84.302	ENSMODG00000013187	-	94	84.302	Monodelphis_domestica
ENSTRUG00000014094	smarca5	100	95.169	ENSMALG00000002081	smarca5	100	95.468	Monopterus_albus
ENSTRUG00000014094	smarca5	95	81.709	MGP_CAROLIEiJ_G0033034	Smarca1	92	82.671	Mus_caroli
ENSTRUG00000014094	smarca5	95	81.809	ENSMUSG00000031099	Smarca1	93	82.371	Mus_musculus
ENSTRUG00000014094	smarca5	95	81.883	MGP_PahariEiJ_G0031579	Smarca1	92	82.551	Mus_pahari
ENSTRUG00000014094	smarca5	95	81.809	MGP_SPRETEiJ_G0034192	Smarca1	93	82.371	Mus_spretus
ENSTRUG00000014094	smarca5	95	81.936	ENSMPUG00000017423	SMARCA1	88	82.495	Mustela_putorius_furo
ENSTRUG00000014094	smarca5	95	80.677	ENSMLUG00000029614	SMARCA1	93	80.924	Myotis_lucifugus
ENSTRUG00000014094	smarca5	93	82.801	ENSNGAG00000006492	Smarca1	91	82.932	Nannospalax_galili
ENSTRUG00000014094	smarca5	96	97.082	ENSNBRG00000004463	smarca5	99	97.082	Neolamprologus_brichardi
ENSTRUG00000014094	smarca5	95	81.038	ENSNLEG00000015179	SMARCA1	94	83.615	Nomascus_leucogenys
ENSTRUG00000014094	smarca5	89	76.257	ENSMEUG00000008819	SMARCA1	98	76.257	Notamacropus_eugenii
ENSTRUG00000014094	smarca5	97	79.804	ENSODEG00000012163	SMARCA1	91	82.932	Octodon_degus
ENSTRUG00000014094	smarca5	100	96.236	ENSONIG00000009993	smarca5	100	96.236	Oreochromis_niloticus
ENSTRUG00000014094	smarca5	94	85.185	ENSOANG00000002862	SMARCA1	99	85.185	Ornithorhynchus_anatinus
ENSTRUG00000014094	smarca5	95	83.181	ENSOCUG00000001047	SMARCA1	93	83.503	Oryctolagus_cuniculus
ENSTRUG00000014094	smarca5	100	94.899	ENSORLG00000021998	smarca5	100	95.091	Oryzias_latipes
ENSTRUG00000014094	smarca5	100	94.894	ENSORLG00020017679	smarca5	100	95.087	Oryzias_latipes_hni
ENSTRUG00000014094	smarca5	100	94.986	ENSORLG00015017210	smarca5	100	94.889	Oryzias_latipes_hsok
ENSTRUG00000014094	smarca5	100	95.463	ENSOMEG00000000086	smarca5	100	95.270	Oryzias_melastigma
ENSTRUG00000014094	smarca5	93	83.368	ENSOGAG00000004399	SMARCA1	91	83.770	Otolemur_garnettii
ENSTRUG00000014094	smarca5	94	83.402	ENSOARG00000014638	SMARCA1	99	83.402	Ovis_aries
ENSTRUG00000014094	smarca5	95	82.727	ENSPPAG00000034647	SMARCA1	93	83.401	Pan_paniscus
ENSTRUG00000014094	smarca5	95	82.929	ENSPPRG00000008929	SMARCA1	93	83.503	Panthera_pardus
ENSTRUG00000014094	smarca5	95	81.132	ENSPTIG00000000915	SMARCA1	96	81.682	Panthera_tigris_altaica
ENSTRUG00000014094	smarca5	95	82.727	ENSPTRG00000049876	SMARCA1	93	82.394	Pan_troglodytes
ENSTRUG00000014094	smarca5	95	82.727	ENSPANG00000003871	SMARCA1	93	83.401	Papio_anubis
ENSTRUG00000014094	smarca5	94	82.004	ENSPKIG00000013411	smarca1	96	83.596	Paramormyrops_kingsleyae
ENSTRUG00000014094	smarca5	94	84.568	ENSPSIG00000010101	SMARCA1	99	84.568	Pelodiscus_sinensis
ENSTRUG00000014094	smarca5	93	82.595	ENSPEMG00000017503	Smarca1	91	82.723	Peromyscus_maniculatus_bairdii
ENSTRUG00000014094	smarca5	95	84.725	ENSPCIG00000015460	SMARCA1	96	84.725	Phascolarctos_cinereus
ENSTRUG00000014094	smarca5	100	95.556	ENSPFOG00000007649	smarca5	100	95.556	Poecilia_formosa
ENSTRUG00000014094	smarca5	100	95.556	ENSPLAG00000003363	smarca5	100	95.556	Poecilia_latipinna
ENSTRUG00000014094	smarca5	100	95.652	ENSPMEG00000019849	smarca5	100	95.652	Poecilia_mexicana
ENSTRUG00000014094	smarca5	100	95.652	ENSPREG00000023250	smarca5	100	95.652	Poecilia_reticulata
ENSTRUG00000014094	smarca5	95	79.899	ENSPPYG00000020703	SMARCA1	93	80.550	Pongo_abelii
ENSTRUG00000014094	smarca5	75	76.636	ENSPCOG00000020722	SMARCA1	97	78.479	Propithecus_coquereli
ENSTRUG00000014094	smarca5	87	83.226	ENSPVAG00000003805	SMARCA1	85	83.311	Pteropus_vampyrus
ENSTRUG00000014094	smarca5	58	98.153	ENSPNYG00000012299	smarca5	92	98.153	Pundamilia_nyererei
ENSTRUG00000014094	smarca5	95	82.121	ENSRNOG00000003762	Smarca1	93	82.688	Rattus_norvegicus
ENSTRUG00000014094	smarca5	95	82.828	ENSRROG00000034167	SMARCA1	93	83.503	Rhinopithecus_roxellana
ENSTRUG00000014094	smarca5	94	83.607	ENSSBOG00000020641	SMARCA1	99	83.607	Saimiri_boliviensis_boliviensis
ENSTRUG00000014094	smarca5	94	79.630	ENSSHAG00000013518	SMARCA1	99	79.630	Sarcophilus_harrisii
ENSTRUG00000014094	smarca5	95	92.143	ENSSFOG00015016794	smarca5	100	92.371	Scleropages_formosus
ENSTRUG00000014094	smarca5	95	83.943	ENSSFOG00015009043	smarca1	96	84.114	Scleropages_formosus
ENSTRUG00000014094	smarca5	100	94.696	ENSSMAG00000004801	smarca5	100	94.889	Scophthalmus_maximus
ENSTRUG00000014094	smarca5	100	95.845	ENSSDUG00000020690	smarca5	100	95.845	Seriola_dumerili
ENSTRUG00000014094	smarca5	100	95.845	ENSSLDG00000025190	smarca5	100	95.845	Seriola_lalandi_dorsalis
ENSTRUG00000014094	smarca5	78	84.698	ENSSARG00000000842	SMARCA1	81	84.698	Sorex_araneus
ENSTRUG00000014094	smarca5	93	84.472	ENSSPUG00000000590	SMARCA1	96	82.447	Sphenodon_punctatus
ENSTRUG00000014094	smarca5	100	96.718	ENSSPAG00000002894	smarca5	100	96.718	Stegastes_partitus
ENSTRUG00000014094	smarca5	94	83.060	ENSSSCG00000012649	SMARCA1	97	81.393	Sus_scrofa
ENSTRUG00000014094	smarca5	95	83.707	ENSTGUG00000003899	-	99	83.707	Taeniopygia_guttata
ENSTRUG00000014094	smarca5	98	96.752	ENSTNIG00000017717	smarca5	97	96.752	Tetraodon_nigroviridis
ENSTRUG00000014094	smarca5	86	82.483	ENSTBEG00000014973	SMARCA1	89	82.638	Tupaia_belangeri
ENSTRUG00000014094	smarca5	93	79.162	ENSTTRG00000006168	SMARCA1	96	79.557	Tursiops_truncatus
ENSTRUG00000014094	smarca5	95	82.626	ENSUAMG00000020201	SMARCA1	93	83.198	Ursus_americanus
ENSTRUG00000014094	smarca5	96	78.378	ENSUMAG00000004073	SMARCA1	96	85.330	Ursus_maritimus
ENSTRUG00000014094	smarca5	73	85.990	ENSVPAG00000010492	-	77	86.505	Vicugna_pacos
ENSTRUG00000014094	smarca5	95	82.929	ENSVVUG00000008878	SMARCA1	98	84.952	Vulpes_vulpes
ENSTRUG00000014094	smarca5	95	84.130	ENSXETG00000001526	smarca1	98	84.458	Xenopus_tropicalis
ENSTRUG00000014094	smarca5	97	95.933	ENSXCOG00000011170	smarca5	100	95.933	Xiphophorus_couchianus
ENSTRUG00000014094	smarca5	100	95.556	ENSXMAG00000009678	smarca5	100	95.556	Xiphophorus_maculatus