EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000014490 (Gene tree)
Gene ID: 101080146
Gene Symbol: parp1
Alias: si:dkey-206f10.3|wu:fc60f12|zgc:110092
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 9450 bases
Position: chr16:6501548-6510997
Accession: 101080146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000037062	PARP	PF00644.20	7.1e-74	1	1
ENSTRUP00000049295	PARP	PF00644.20	5e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000037194	-	5102	XM_003971676	ENSTRUP00000037062	1013 (aa)	XP_003971725	H2UJE1
ENSTRUT00000053032	-	5257	-	ENSTRUP00000049295	1047 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000014490's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03410	Base excision repair	KEGG
tru04210	Apoptosis	KEGG
tru04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000014490's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000014490	parp1	100	69.902	ENSG00000143799	PARP1	100	69.902	Homo_sapiens
ENSTRUG00000014490	parp1	100	87.377	ENSAPOG00000006414	parp1	100	87.377	Acanthochromis_polyacanthus
ENSTRUG00000014490	parp1	99	68.864	ENSAMEG00000014451	PARP1	100	68.966	Ailuropoda_melanoleuca
ENSTRUG00000014490	parp1	100	86.982	ENSACIG00000005651	parp1	100	86.982	Amphilophus_citrinellus
ENSTRUG00000014490	parp1	100	88.264	ENSAOCG00000021005	parp1	100	88.264	Amphiprion_ocellaris
ENSTRUG00000014490	parp1	100	88.166	ENSAPEG00000004784	parp1	100	88.166	Amphiprion_percula
ENSTRUG00000014490	parp1	100	88.166	ENSATEG00000010457	parp1	100	88.166	Anabas_testudineus
ENSTRUG00000014490	parp1	87	73.016	ENSAPLG00000014039	PARP1	99	73.016	Anas_platyrhynchos
ENSTRUG00000014490	parp1	100	71.554	ENSACAG00000006189	PARP1	100	71.848	Anolis_carolinensis
ENSTRUG00000014490	parp1	100	70.421	ENSANAG00000032699	PARP1	100	70.588	Aotus_nancymaae
ENSTRUG00000014490	parp1	100	86.871	ENSACLG00000015489	parp1	100	86.871	Astatotilapia_calliptera
ENSTRUG00000014490	parp1	100	79.432	ENSAMXG00000006465	parp1	100	80.509	Astyanax_mexicanus
ENSTRUG00000014490	parp1	100	68.524	ENSBTAG00000000837	PARP1	100	68.524	Bos_taurus
ENSTRUG00000014490	parp1	94	43.750	WBGene00004049	parp-1	100	46.743	Caenorhabditis_elegans
ENSTRUG00000014490	parp1	100	69.638	ENSCJAG00000012831	PARP1	100	69.804	Callithrix_jacchus
ENSTRUG00000014490	parp1	99	68.577	ENSCAFG00000016089	PARP1	100	68.680	Canis_familiaris
ENSTRUG00000014490	parp1	100	69.216	ENSCAFG00020001660	PARP1	100	69.314	Canis_lupus_dingo
ENSTRUG00000014490	parp1	100	68.627	ENSCHIG00000018072	PARP1	100	69.013	Capra_hircus
ENSTRUG00000014490	parp1	98	70.011	ENSTSYG00000003699	PARP1	99	70.011	Carlito_syrichta
ENSTRUG00000014490	parp1	99	57.900	ENSCAPG00000011113	-	99	57.596	Cavia_aperea
ENSTRUG00000014490	parp1	100	68.989	ENSCPOG00000015643	-	100	68.989	Cavia_porcellus
ENSTRUG00000014490	parp1	100	70.519	ENSCCAG00000033484	PARP1	100	70.392	Cebus_capucinus
ENSTRUG00000014490	parp1	100	69.412	ENSCATG00000038981	PARP1	100	69.412	Cercocebus_atys
ENSTRUG00000014490	parp1	99	69.132	ENSCLAG00000006637	PARP1	99	69.132	Chinchilla_lanigera
ENSTRUG00000014490	parp1	66	77.344	ENSCHOG00000003539	PARP1	66	77.344	Choloepus_hoffmanni
ENSTRUG00000014490	parp1	99	72.925	ENSCPBG00000011958	PARP1	99	72.925	Chrysemys_picta_bellii
ENSTRUG00000014490	parp1	99	68.948	ENSCANG00000041340	PARP1	100	68.948	Colobus_angolensis_palliatus
ENSTRUG00000014490	parp1	100	68.793	ENSCGRG00001020559	Parp1	100	68.891	Cricetulus_griseus_chok1gshd
ENSTRUG00000014490	parp1	99	68.609	ENSCGRG00000004864	Parp1	100	68.712	Cricetulus_griseus_crigri
ENSTRUG00000014490	parp1	100	84.828	ENSCSEG00000020665	parp1	99	91.365	Cynoglossus_semilaevis
ENSTRUG00000014490	parp1	99	86.939	ENSCVAG00000021372	parp1	99	86.939	Cyprinodon_variegatus
ENSTRUG00000014490	parp1	100	81.729	ENSDARG00000019529	parp1	100	81.219	Danio_rerio
ENSTRUG00000014490	parp1	99	68.750	ENSDNOG00000012059	PARP1	100	69.057	Dasypus_novemcinctus
ENSTRUG00000014490	parp1	99	67.791	ENSDORG00000005234	Parp1	100	68.098	Dipodomys_ordii
ENSTRUG00000014490	parp1	99	41.159	FBgn0010247	Parp	99	40.864	Drosophila_melanogaster
ENSTRUG00000014490	parp1	87	76.562	ENSETEG00000013254	PARP1	88	76.562	Echinops_telfairi
ENSTRUG00000014490	parp1	97	58.870	ENSEBUG00000005820	parp1	100	58.753	Eptatretus_burgeri
ENSTRUG00000014490	parp1	98	69.261	ENSEASG00005013275	PARP1	99	69.760	Equus_asinus_asinus
ENSTRUG00000014490	parp1	100	69.314	ENSECAG00000019207	PARP1	100	69.706	Equus_caballus
ENSTRUG00000014490	parp1	99	66.831	ENSEEUG00000012253	PARP1	99	66.831	Erinaceus_europaeus
ENSTRUG00000014490	parp1	99	82.322	ENSELUG00000017336	parp1	99	82.672	Esox_lucius
ENSTRUG00000014490	parp1	97	68.629	ENSFCAG00000005777	PARP1	100	68.416	Felis_catus
ENSTRUG00000014490	parp1	99	73.183	ENSFALG00000011578	PARP1	100	73.490	Ficedula_albicollis
ENSTRUG00000014490	parp1	99	68.507	ENSFDAG00000017662	PARP1	100	68.507	Fukomys_damarensis
ENSTRUG00000014490	parp1	100	86.601	ENSFHEG00000001117	parp1	100	86.601	Fundulus_heteroclitus
ENSTRUG00000014490	parp1	99	82.660	ENSGMOG00000014929	parp1	99	82.660	Gadus_morhua
ENSTRUG00000014490	parp1	100	73.281	ENSGALG00000009228	PARP1	100	73.438	Gallus_gallus
ENSTRUG00000014490	parp1	100	86.897	ENSGAFG00000010450	parp1	100	86.897	Gambusia_affinis
ENSTRUG00000014490	parp1	100	86.713	ENSGACG00000011280	parp1	100	86.713	Gasterosteus_aculeatus
ENSTRUG00000014490	parp1	99	72.206	ENSGAGG00000010066	PARP1	99	72.799	Gopherus_agassizii
ENSTRUG00000014490	parp1	100	69.608	ENSGGOG00000006308	PARP1	100	69.608	Gorilla_gorilla
ENSTRUG00000014490	parp1	100	87.377	ENSHBUG00000010490	parp1	100	87.377	Haplochromis_burtoni
ENSTRUG00000014490	parp1	96	68.094	ENSHGLG00000003992	PARP1	93	68.094	Heterocephalus_glaber_female
ENSTRUG00000014490	parp1	99	68.094	ENSHGLG00100016965	PARP1	93	68.094	Heterocephalus_glaber_male
ENSTRUG00000014490	parp1	100	85.882	ENSHCOG00000011619	parp1	100	86.176	Hippocampus_comes
ENSTRUG00000014490	parp1	100	80.059	ENSIPUG00000020250	parp1	100	80.059	Ictalurus_punctatus
ENSTRUG00000014490	parp1	100	69.706	ENSSTOG00000016000	PARP1	100	69.706	Ictidomys_tridecemlineatus
ENSTRUG00000014490	parp1	100	68.499	ENSJJAG00000023497	Parp1	100	68.725	Jaculus_jaculus
ENSTRUG00000014490	parp1	100	86.305	ENSKMAG00000011627	parp1	100	86.305	Kryptolebias_marmoratus
ENSTRUG00000014490	parp1	100	88.055	ENSLBEG00000013376	parp1	100	88.055	Labrus_bergylta
ENSTRUG00000014490	parp1	99	56.428	ENSLACG00000002735	PARP1	99	56.453	Latimeria_chalumnae
ENSTRUG00000014490	parp1	100	78.543	ENSLOCG00000015798	parp1	100	78.937	Lepisosteus_oculatus
ENSTRUG00000014490	parp1	99	67.722	ENSLAFG00000007830	PARP1	100	67.824	Loxodonta_africana
ENSTRUG00000014490	parp1	100	69.216	ENSMFAG00000002526	PARP1	100	69.216	Macaca_fascicularis
ENSTRUG00000014490	parp1	100	69.314	ENSMMUG00000021820	PARP1	100	69.314	Macaca_mulatta
ENSTRUG00000014490	parp1	100	69.314	ENSMNEG00000034074	PARP1	100	69.314	Macaca_nemestrina
ENSTRUG00000014490	parp1	100	67.546	ENSMLEG00000012344	PARP1	100	67.546	Mandrillus_leucophaeus
ENSTRUG00000014490	parp1	100	87.870	ENSMAMG00000020652	parp1	100	87.870	Mastacembelus_armatus
ENSTRUG00000014490	parp1	100	87.574	ENSMZEG00005016907	parp1	100	87.574	Maylandia_zebra
ENSTRUG00000014490	parp1	99	73.320	ENSMGAG00000007760	PARP1	100	73.523	Meleagris_gallopavo
ENSTRUG00000014490	parp1	100	68.627	ENSMAUG00000008306	Parp1	100	68.627	Mesocricetus_auratus
ENSTRUG00000014490	parp1	100	67.255	ENSMICG00000017076	PARP1	100	67.255	Microcebus_murinus
ENSTRUG00000014490	parp1	100	69.284	ENSMOCG00000014315	Parp1	100	69.284	Microtus_ochrogaster
ENSTRUG00000014490	parp1	100	87.819	ENSMMOG00000015966	parp1	100	87.819	Mola_mola
ENSTRUG00000014490	parp1	100	70.069	ENSMODG00000006076	PARP1	100	70.167	Monodelphis_domestica
ENSTRUG00000014490	parp1	100	85.404	ENSMALG00000004057	parp1	100	85.404	Monopterus_albus
ENSTRUG00000014490	parp1	100	68.725	MGP_CAROLIEiJ_G0014978	Parp1	100	75.510	Mus_caroli
ENSTRUG00000014490	parp1	100	68.627	ENSMUSG00000026496	Parp1	99	75.510	Mus_musculus
ENSTRUG00000014490	parp1	100	68.627	MGP_SPRETEiJ_G0015777	Parp1	100	75.510	Mus_spretus
ENSTRUG00000014490	parp1	100	69.804	ENSMPUG00000004585	PARP1	100	69.902	Mustela_putorius_furo
ENSTRUG00000014490	parp1	76	74.884	ENSMLUG00000012285	PARP1	85	74.884	Myotis_lucifugus
ENSTRUG00000014490	parp1	100	69.087	ENSNGAG00000003885	Parp1	100	69.382	Nannospalax_galili
ENSTRUG00000014490	parp1	100	86.673	ENSNBRG00000017434	parp1	100	86.673	Neolamprologus_brichardi
ENSTRUG00000014490	parp1	96	72.637	ENSNLEG00000013905	PARP1	100	72.637	Nomascus_leucogenys
ENSTRUG00000014490	parp1	67	78.507	ENSMEUG00000007720	PARP1	87	78.507	Notamacropus_eugenii
ENSTRUG00000014490	parp1	100	70.490	ENSOPRG00000011722	PARP1	100	70.490	Ochotona_princeps
ENSTRUG00000014490	parp1	100	68.324	ENSODEG00000007424	PARP1	100	68.683	Octodon_degus
ENSTRUG00000014490	parp1	100	87.179	ENSONIG00000013486	parp1	100	87.179	Oreochromis_niloticus
ENSTRUG00000014490	parp1	99	70.654	ENSOANG00000001488	PARP1	100	71.063	Ornithorhynchus_anatinus
ENSTRUG00000014490	parp1	100	70.519	ENSOCUG00000017820	PARP1	100	70.519	Oryctolagus_cuniculus
ENSTRUG00000014490	parp1	100	85.616	ENSORLG00000013691	parp1	100	85.616	Oryzias_latipes
ENSTRUG00000014490	parp1	99	85.132	ENSORLG00020001074	parp1	99	85.132	Oryzias_latipes_hni
ENSTRUG00000014490	parp1	100	85.517	ENSORLG00015007090	parp1	100	85.517	Oryzias_latipes_hsok
ENSTRUG00000014490	parp1	100	69.902	ENSOGAG00000016206	PARP1	100	69.902	Otolemur_garnettii
ENSTRUG00000014490	parp1	100	68.622	ENSOARG00000000811	PARP1	100	69.013	Ovis_aries
ENSTRUG00000014490	parp1	100	69.510	ENSPPAG00000040862	PARP1	100	69.510	Pan_paniscus
ENSTRUG00000014490	parp1	99	68.029	ENSPPRG00000003528	PARP1	100	67.919	Panthera_pardus
ENSTRUG00000014490	parp1	93	58.508	ENSPTIG00000009102	PARP1	98	58.105	Panthera_tigris_altaica
ENSTRUG00000014490	parp1	100	69.510	ENSPTRG00000002049	PARP1	100	69.510	Pan_troglodytes
ENSTRUG00000014490	parp1	100	69.442	ENSPANG00000011198	PARP1	100	69.442	Papio_anubis
ENSTRUG00000014490	parp1	100	80.493	ENSPKIG00000006039	parp1	100	80.493	Paramormyrops_kingsleyae
ENSTRUG00000014490	parp1	99	70.744	ENSPSIG00000016374	PARP1	100	71.050	Pelodiscus_sinensis
ENSTRUG00000014490	parp1	100	81.613	ENSPMGG00000008936	parp1	100	81.613	Periophthalmus_magnuspinnatus
ENSTRUG00000014490	parp1	100	69.087	ENSPEMG00000020230	Parp1	100	69.087	Peromyscus_maniculatus_bairdii
ENSTRUG00000014490	parp1	99	70.217	ENSPCIG00000006436	PARP1	99	70.513	Phascolarctos_cinereus
ENSTRUG00000014490	parp1	100	85.813	ENSPFOG00000002342	parp1	100	85.813	Poecilia_formosa
ENSTRUG00000014490	parp1	100	87.488	ENSPLAG00000000909	parp1	100	87.488	Poecilia_latipinna
ENSTRUG00000014490	parp1	100	87.685	ENSPMEG00000013979	parp1	100	87.685	Poecilia_mexicana
ENSTRUG00000014490	parp1	100	86.897	ENSPREG00000001114	parp1	100	86.897	Poecilia_reticulata
ENSTRUG00000014490	parp1	99	69.089	ENSPPYG00000000164	PARP1	100	69.089	Pongo_abelii
ENSTRUG00000014490	parp1	59	77.160	ENSPCAG00000005558	-	59	77.160	Procavia_capensis
ENSTRUG00000014490	parp1	100	70.225	ENSPCOG00000016918	PARP1	100	70.225	Propithecus_coquereli
ENSTRUG00000014490	parp1	90	80.488	ENSPVAG00000005543	PARP1	86	80.488	Pteropus_vampyrus
ENSTRUG00000014490	parp1	100	86.871	ENSPNYG00000009702	parp1	100	86.871	Pundamilia_nyererei
ENSTRUG00000014490	parp1	100	81.409	ENSPNAG00000002787	parp1	100	81.783	Pygocentrus_nattereri
ENSTRUG00000014490	parp1	100	68.333	ENSRNOG00000003084	Parp1	100	68.137	Rattus_norvegicus
ENSTRUG00000014490	parp1	100	69.510	ENSRBIG00000044893	PARP1	100	69.510	Rhinopithecus_bieti
ENSTRUG00000014490	parp1	100	69.510	ENSRROG00000029280	PARP1	100	69.510	Rhinopithecus_roxellana
ENSTRUG00000014490	parp1	100	51.965	ENSRROG00000040615	-	97	58.701	Rhinopithecus_roxellana
ENSTRUG00000014490	parp1	100	70.617	ENSSBOG00000010144	PARP1	100	70.490	Saimiri_boliviensis_boliviensis
ENSTRUG00000014490	parp1	99	69.969	ENSSHAG00000001991	PARP1	100	70.276	Sarcophilus_harrisii
ENSTRUG00000014490	parp1	100	80.569	ENSSFOG00015020017	parp1	100	80.667	Scleropages_formosus
ENSTRUG00000014490	parp1	100	87.475	ENSSMAG00000013799	parp1	100	87.475	Scophthalmus_maximus
ENSTRUG00000014490	parp1	100	87.870	ENSSDUG00000016626	parp1	100	87.870	Seriola_dumerili
ENSTRUG00000014490	parp1	100	87.870	ENSSLDG00000006384	parp1	100	87.870	Seriola_lalandi_dorsalis
ENSTRUG00000014490	parp1	53	75.758	ENSSARG00000009436	-	58	75.758	Sorex_araneus
ENSTRUG00000014490	parp1	100	68.110	ENSSPUG00000007790	PARP1	100	68.996	Sphenodon_punctatus
ENSTRUG00000014490	parp1	100	85.291	ENSSPAG00000019074	parp1	100	87.944	Stegastes_partitus
ENSTRUG00000014490	parp1	100	69.412	ENSSSCG00000023660	PARP1	100	69.510	Sus_scrofa
ENSTRUG00000014490	parp1	97	72.395	ENSTGUG00000004260	-	100	72.506	Taeniopygia_guttata
ENSTRUG00000014490	parp1	100	91.675	ENSTNIG00000016384	parp1	100	91.675	Tetraodon_nigroviridis
ENSTRUG00000014490	parp1	81	76.923	ENSTBEG00000002364	PARP1	91	76.923	Tupaia_belangeri
ENSTRUG00000014490	parp1	100	65.000	ENSTTRG00000000188	PARP1	100	65.392	Tursiops_truncatus
ENSTRUG00000014490	parp1	99	68.980	ENSUAMG00000014388	PARP1	100	69.082	Ursus_americanus
ENSTRUG00000014490	parp1	96	62.258	ENSUMAG00000014555	PARP1	99	62.755	Ursus_maritimus
ENSTRUG00000014490	parp1	83	76.471	ENSVPAG00000011411	PARP1	83	76.471	Vicugna_pacos
ENSTRUG00000014490	parp1	96	68.475	ENSVVUG00000001655	PARP1	100	68.577	Vulpes_vulpes
ENSTRUG00000014490	parp1	98	70.600	ENSXETG00000022610	parp1	99	69.811	Xenopus_tropicalis
ENSTRUG00000014490	parp1	100	86.700	ENSXMAG00000003632	parp1	100	86.700	Xiphophorus_maculatus