EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000014571 (Gene tree)
Gene ID: 101069433
Gene Symbol: mtrex
Alias: julie|mtrex|skiv2l2|wu:fd11a05|zgc:63838
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 15446 bases
Position: chr6:3937581-3953026
Accession: 101069433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000037244	rRNA_proc-arch	PF13234.6	4.5e-86	1	1
ENSTRUP00000057467	rRNA_proc-arch	PF13234.6	4.7e-86	1	1
ENSTRUP00000050676	rRNA_proc-arch	PF13234.6	3.7e-81	1	1
ENSTRUP00000050676	DEAD	PF00270.29	8e-17	1	1
ENSTRUP00000037244	DEAD	PF00270.29	1.1e-16	1	1
ENSTRUP00000057467	DEAD	PF00270.29	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000057553	-	7411	-	ENSTRUP00000050676	1061 (aa)	-	-
ENSTRUT00000037379	-	3015	-	ENSTRUP00000037244	1004 (aa)	-	H2UJX3
ENSTRUT00000054627	-	7330	XM_003965185	ENSTRUP00000057467	1034 (aa)	XP_003965234	UPI00016E7673

Gene Model

Click here to download ENSTRUG00000014571's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000014571's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000014571	mtrex	65	45.399	ENSTRUG00000000966	skiv2l	75	40.684

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000014571	mtrex	100	82.762	ENSG00000039123	MTREX	100	82.952	Homo_sapiens
ENSTRUG00000014571	mtrex	100	91.514	ENSAPOG00000007814	mtrex	100	91.514	Acanthochromis_polyacanthus
ENSTRUG00000014571	mtrex	100	82.514	ENSAMEG00000013856	MTREX	100	82.514	Ailuropoda_melanoleuca
ENSTRUG00000014571	mtrex	98	90.562	ENSACIG00000015117	mtrex	99	90.361	Amphilophus_citrinellus
ENSTRUG00000014571	mtrex	100	91.610	ENSAOCG00000011884	mtrex	100	91.610	Amphiprion_ocellaris
ENSTRUG00000014571	mtrex	100	91.514	ENSAPEG00000019384	mtrex	100	91.514	Amphiprion_percula
ENSTRUG00000014571	mtrex	100	92.478	ENSATEG00000015117	mtrex	100	92.478	Anabas_testudineus
ENSTRUG00000014571	mtrex	97	83.813	ENSAPLG00000009694	MTREX	100	83.813	Anas_platyrhynchos
ENSTRUG00000014571	mtrex	100	82.887	ENSACAG00000015200	MTREX	96	82.887	Anolis_carolinensis
ENSTRUG00000014571	mtrex	100	82.745	ENSANAG00000023095	MTREX	100	82.857	Aotus_nancymaae
ENSTRUG00000014571	mtrex	100	91.514	ENSACLG00000001921	mtrex	100	91.514	Astatotilapia_calliptera
ENSTRUG00000014571	mtrex	95	85.324	ENSAMXG00000018751	mtrex	99	85.324	Astyanax_mexicanus
ENSTRUG00000014571	mtrex	100	83.078	ENSBTAG00000010518	MTREX	100	83.048	Bos_taurus
ENSTRUG00000014571	mtrex	96	51.417	WBGene00012342	mtr-4	96	51.113	Caenorhabditis_elegans
ENSTRUG00000014571	mtrex	100	82.180	ENSCJAG00000001773	MTREX	100	82.126	Callithrix_jacchus
ENSTRUG00000014571	mtrex	100	82.857	ENSCAFG00000006818	MTREX	100	83.048	Canis_familiaris
ENSTRUG00000014571	mtrex	100	82.857	ENSCAFG00020024352	MTREX	100	83.048	Canis_lupus_dingo
ENSTRUG00000014571	mtrex	100	82.762	ENSCHIG00000024413	MTREX	100	82.857	Capra_hircus
ENSTRUG00000014571	mtrex	93	84.201	ENSTSYG00000007389	MTREX	100	84.201	Carlito_syrichta
ENSTRUG00000014571	mtrex	87	75.342	ENSCAPG00000008696	MTREX	95	75.171	Cavia_aperea
ENSTRUG00000014571	mtrex	100	82.745	ENSCPOG00000009797	MTREX	100	82.857	Cavia_porcellus
ENSTRUG00000014571	mtrex	100	82.650	ENSCCAG00000014177	MTREX	100	82.857	Cebus_capucinus
ENSTRUG00000014571	mtrex	100	82.873	ENSCATG00000042153	MTREX	100	82.952	Cercocebus_atys
ENSTRUG00000014571	mtrex	100	82.555	ENSCLAG00000006622	MTREX	100	82.571	Chinchilla_lanigera
ENSTRUG00000014571	mtrex	100	79.107	ENSCSAG00000016445	MTREX	100	79.297	Chlorocebus_sabaeus
ENSTRUG00000014571	mtrex	61	97.222	ENSCHOG00000010936	-	62	97.222	Choloepus_hoffmanni
ENSTRUG00000014571	mtrex	100	83.750	ENSCPBG00000026551	MTREX	94	83.766	Chrysemys_picta_bellii
ENSTRUG00000014571	mtrex	99	65.670	ENSCING00000003239	-	99	65.134	Ciona_intestinalis
ENSTRUG00000014571	mtrex	99	64.498	ENSCSAVG00000009304	-	99	69.173	Ciona_savignyi
ENSTRUG00000014571	mtrex	100	82.873	ENSCANG00000035770	MTREX	100	82.873	Colobus_angolensis_palliatus
ENSTRUG00000014571	mtrex	100	83.111	ENSCGRG00001024680	Mtrex	100	83.111	Cricetulus_griseus_chok1gshd
ENSTRUG00000014571	mtrex	100	83.111	ENSCGRG00000000307	Mtrex	100	83.111	Cricetulus_griseus_crigri
ENSTRUG00000014571	mtrex	100	90.260	ENSCSEG00000018621	mtrex	98	90.453	Cynoglossus_semilaevis
ENSTRUG00000014571	mtrex	100	90.935	ENSCVAG00000004556	mtrex	100	90.935	Cyprinodon_variegatus
ENSTRUG00000014571	mtrex	100	85.439	ENSDARG00000013457	mtrex	100	85.439	Danio_rerio
ENSTRUG00000014571	mtrex	100	82.890	ENSDNOG00000015375	MTREX	100	82.890	Dasypus_novemcinctus
ENSTRUG00000014571	mtrex	100	82.920	ENSDORG00000006782	Mtrex	100	83.015	Dipodomys_ordii
ENSTRUG00000014571	mtrex	93	65.429	FBgn0001986	Mtr4	92	63.265	Drosophila_melanogaster
ENSTRUG00000014571	mtrex	83	75.610	ENSETEG00000000727	MTREX	85	75.610	Echinops_telfairi
ENSTRUG00000014571	mtrex	99	72.534	ENSEBUG00000012869	mtrex	99	72.534	Eptatretus_burgeri
ENSTRUG00000014571	mtrex	100	82.555	ENSEASG00005013270	MTREX	100	82.667	Equus_asinus_asinus
ENSTRUG00000014571	mtrex	100	82.650	ENSECAG00000023723	MTREX	100	87.907	Equus_caballus
ENSTRUG00000014571	mtrex	98	75.364	ENSEEUG00000000527	MTREX	100	75.315	Erinaceus_europaeus
ENSTRUG00000014571	mtrex	98	86.301	ENSELUG00000004898	mtrex	100	89.927	Esox_lucius
ENSTRUG00000014571	mtrex	100	83.065	ENSFCAG00000010575	MTREX	100	83.065	Felis_catus
ENSTRUG00000014571	mtrex	100	81.304	ENSFALG00000010850	MTREX	100	81.400	Ficedula_albicollis
ENSTRUG00000014571	mtrex	100	82.729	ENSFDAG00000011199	MTREX	100	82.729	Fukomys_damarensis
ENSTRUG00000014571	mtrex	100	90.935	ENSFHEG00000023014	mtrex	100	88.772	Fundulus_heteroclitus
ENSTRUG00000014571	mtrex	100	85.164	ENSGMOG00000014702	mtrex	100	85.164	Gadus_morhua
ENSTRUG00000014571	mtrex	100	82.885	ENSGALG00000014709	MTREX	86	82.885	Gallus_gallus
ENSTRUG00000014571	mtrex	100	90.357	ENSGAFG00000012425	mtrex	100	90.357	Gambusia_affinis
ENSTRUG00000014571	mtrex	100	86.473	ENSGACG00000016260	mtrex	99	90.978	Gasterosteus_aculeatus
ENSTRUG00000014571	mtrex	100	83.462	ENSGAGG00000020036	MTREX	100	83.670	Gopherus_agassizii
ENSTRUG00000014571	mtrex	100	82.762	ENSGGOG00000001867	MTREX	100	82.952	Gorilla_gorilla
ENSTRUG00000014571	mtrex	100	91.514	ENSHBUG00000006229	mtrex	100	91.514	Haplochromis_burtoni
ENSTRUG00000014571	mtrex	100	82.792	ENSHGLG00000019445	SKIV2L2	100	82.729	Heterocephalus_glaber_female
ENSTRUG00000014571	mtrex	100	82.792	ENSHGLG00100011833	SKIV2L2	100	82.729	Heterocephalus_glaber_male
ENSTRUG00000014571	mtrex	94	88.662	ENSHCOG00000019995	mtrex	100	90.316	Hippocampus_comes
ENSTRUG00000014571	mtrex	100	84.822	ENSIPUG00000024348	skiv2l2	100	84.726	Ictalurus_punctatus
ENSTRUG00000014571	mtrex	100	82.634	ENSSTOG00000010802	MTREX	100	82.510	Ictidomys_tridecemlineatus
ENSTRUG00000014571	mtrex	100	78.544	ENSJJAG00000020975	Mtrex	100	78.298	Jaculus_jaculus
ENSTRUG00000014571	mtrex	100	91.691	ENSKMAG00000012642	mtrex	100	91.691	Kryptolebias_marmoratus
ENSTRUG00000014571	mtrex	100	92.382	ENSLBEG00000019367	mtrex	100	92.382	Labrus_bergylta
ENSTRUG00000014571	mtrex	100	83.719	ENSLACG00000009075	MTREX	100	83.719	Latimeria_chalumnae
ENSTRUG00000014571	mtrex	100	85.591	ENSLOCG00000010186	mtrex	100	85.591	Lepisosteus_oculatus
ENSTRUG00000014571	mtrex	99	80.458	ENSLAFG00000010497	MTREX	100	80.398	Loxodonta_africana
ENSTRUG00000014571	mtrex	100	82.873	ENSMFAG00000031610	MTREX	100	82.952	Macaca_fascicularis
ENSTRUG00000014571	mtrex	100	82.571	ENSMMUG00000010379	MTREX	100	82.605	Macaca_mulatta
ENSTRUG00000014571	mtrex	100	82.873	ENSMNEG00000032746	MTREX	100	82.952	Macaca_nemestrina
ENSTRUG00000014571	mtrex	100	82.873	ENSMLEG00000041051	MTREX	100	82.952	Mandrillus_leucophaeus
ENSTRUG00000014571	mtrex	97	92.807	ENSMAMG00000016753	mtrex	98	92.807	Mastacembelus_armatus
ENSTRUG00000014571	mtrex	100	91.514	ENSMZEG00005000414	mtrex	100	91.514	Maylandia_zebra
ENSTRUG00000014571	mtrex	95	61.290	ENSMGAG00000003980	MTREX	99	61.089	Meleagris_gallopavo
ENSTRUG00000014571	mtrex	100	82.824	ENSMAUG00000010727	Mtrex	100	82.824	Mesocricetus_auratus
ENSTRUG00000014571	mtrex	100	83.048	ENSMICG00000012779	MTREX	100	83.048	Microcebus_murinus
ENSTRUG00000014571	mtrex	100	82.936	ENSMOCG00000019886	Mtrex	100	83.111	Microtus_ochrogaster
ENSTRUG00000014571	mtrex	98	91.474	ENSMMOG00000002476	mtrex	99	91.474	Mola_mola
ENSTRUG00000014571	mtrex	100	82.788	ENSMODG00000019494	MTREX	100	82.692	Monodelphis_domestica
ENSTRUG00000014571	mtrex	98	86.070	ENSMALG00000002917	mtrex	99	88.187	Monopterus_albus
ENSTRUG00000014571	mtrex	100	83.078	MGP_CAROLIEiJ_G0018896	Mtrex	100	83.078	Mus_caroli
ENSTRUG00000014571	mtrex	100	82.887	ENSMUSG00000016018	Mtrex	100	82.887	Mus_musculus
ENSTRUG00000014571	mtrex	100	83.078	MGP_PahariEiJ_G0015967	Mtrex	100	83.078	Mus_pahari
ENSTRUG00000014571	mtrex	100	82.887	MGP_SPRETEiJ_G0019775	Mtrex	100	82.887	Mus_spretus
ENSTRUG00000014571	mtrex	100	82.576	ENSMPUG00000007619	MTREX	100	82.781	Mustela_putorius_furo
ENSTRUG00000014571	mtrex	100	82.398	ENSMLUG00000001152	MTREX	100	82.431	Myotis_lucifugus
ENSTRUG00000014571	mtrex	100	83.333	ENSNGAG00000011938	Mtrex	100	83.429	Nannospalax_galili
ENSTRUG00000014571	mtrex	100	91.610	ENSNBRG00000011293	mtrex	100	91.610	Neolamprologus_brichardi
ENSTRUG00000014571	mtrex	100	79.107	ENSNLEG00000001494	MTREX	100	78.897	Nomascus_leucogenys
ENSTRUG00000014571	mtrex	83	96.078	ENSMEUG00000006496	-	83	96.078	Notamacropus_eugenii
ENSTRUG00000014571	mtrex	100	69.981	ENSOPRG00000008009	MTREX	95	76.027	Ochotona_princeps
ENSTRUG00000014571	mtrex	100	81.792	ENSODEG00000017234	MTREX	100	81.646	Octodon_degus
ENSTRUG00000014571	mtrex	100	91.321	ENSONIG00000007587	mtrex	100	91.321	Oreochromis_niloticus
ENSTRUG00000014571	mtrex	51	82.592	ENSOANG00000004885	-	99	82.592	Ornithorhynchus_anatinus
ENSTRUG00000014571	mtrex	100	83.174	ENSOCUG00000004463	MTREX	100	83.048	Oryctolagus_cuniculus
ENSTRUG00000014571	mtrex	100	90.164	ENSORLG00000005443	mtrex	100	90.164	Oryzias_latipes
ENSTRUG00000014571	mtrex	100	90.164	ENSORLG00020006329	mtrex	100	90.164	Oryzias_latipes_hni
ENSTRUG00000014571	mtrex	100	90.164	ENSORLG00015012924	mtrex	100	90.260	Oryzias_latipes_hsok
ENSTRUG00000014571	mtrex	100	90.183	ENSOMEG00000008825	mtrex	100	90.183	Oryzias_melastigma
ENSTRUG00000014571	mtrex	100	83.015	ENSOGAG00000002886	MTREX	100	82.781	Otolemur_garnettii
ENSTRUG00000014571	mtrex	100	82.526	ENSOARG00000007764	MTREX	100	82.621	Ovis_aries
ENSTRUG00000014571	mtrex	100	82.873	ENSPPAG00000039291	MTREX	100	82.952	Pan_paniscus
ENSTRUG00000014571	mtrex	100	83.065	ENSPPRG00000019701	MTREX	100	83.065	Panthera_pardus
ENSTRUG00000014571	mtrex	100	81.741	ENSPTIG00000009313	MTREX	100	81.741	Panthera_tigris_altaica
ENSTRUG00000014571	mtrex	100	82.873	ENSPTRG00000016878	MTREX	100	82.952	Pan_troglodytes
ENSTRUG00000014571	mtrex	100	82.778	ENSPANG00000009697	MTREX	100	82.857	Papio_anubis
ENSTRUG00000014571	mtrex	100	85.742	ENSPKIG00000020833	mtrex	100	85.742	Paramormyrops_kingsleyae
ENSTRUG00000014571	mtrex	100	83.381	ENSPSIG00000012150	MTREX	100	83.477	Pelodiscus_sinensis
ENSTRUG00000014571	mtrex	100	87.476	ENSPMGG00000002582	mtrex	100	87.476	Periophthalmus_magnuspinnatus
ENSTRUG00000014571	mtrex	95	64.949	ENSPMAG00000009668	mtrex	100	64.985	Petromyzon_marinus
ENSTRUG00000014571	mtrex	94	86.120	ENSPCIG00000024730	MTREX	100	87.198	Phascolarctos_cinereus
ENSTRUG00000014571	mtrex	78	91.730	ENSPFOG00000003141	mtrex	100	93.147	Poecilia_formosa
ENSTRUG00000014571	mtrex	100	90.743	ENSPLAG00000021311	mtrex	100	90.743	Poecilia_latipinna
ENSTRUG00000014571	mtrex	95	90.681	ENSPMEG00000010597	mtrex	99	91.441	Poecilia_mexicana
ENSTRUG00000014571	mtrex	100	90.646	ENSPREG00000003089	mtrex	100	90.646	Poecilia_reticulata
ENSTRUG00000014571	mtrex	98	82.592	ENSPPYG00000015469	MTREX	98	82.672	Pongo_abelii
ENSTRUG00000014571	mtrex	94	73.023	ENSPCAG00000013120	MTREX	94	73.023	Procavia_capensis
ENSTRUG00000014571	mtrex	99	77.487	ENSPCOG00000018092	MTREX	100	77.429	Propithecus_coquereli
ENSTRUG00000014571	mtrex	100	82.667	ENSPVAG00000002445	MTREX	100	82.857	Pteropus_vampyrus
ENSTRUG00000014571	mtrex	100	91.418	ENSPNYG00000006164	mtrex	100	91.418	Pundamilia_nyererei
ENSTRUG00000014571	mtrex	100	85.756	ENSPNAG00000008794	mtrex	100	85.756	Pygocentrus_nattereri
ENSTRUG00000014571	mtrex	99	82.449	ENSRNOG00000010125	Mtrex	97	82.546	Rattus_norvegicus
ENSTRUG00000014571	mtrex	100	81.048	ENSRBIG00000034930	MTREX	100	81.048	Rhinopithecus_bieti
ENSTRUG00000014571	mtrex	100	82.762	ENSRROG00000039895	MTREX	100	82.762	Rhinopithecus_roxellana
ENSTRUG00000014571	mtrex	91	55.473	YJL050W	MTR4	89	55.370	Saccharomyces_cerevisiae
ENSTRUG00000014571	mtrex	100	82.745	ENSSBOG00000026693	MTREX	100	82.687	Saimiri_boliviensis_boliviensis
ENSTRUG00000014571	mtrex	96	85.389	ENSSHAG00000004600	MTREX	99	84.909	Sarcophilus_harrisii
ENSTRUG00000014571	mtrex	100	86.127	ENSSFOG00015014355	skiv2l2	100	85.934	Scleropages_formosus
ENSTRUG00000014571	mtrex	100	91.498	ENSSMAG00000007572	mtrex	100	91.498	Scophthalmus_maximus
ENSTRUG00000014571	mtrex	100	92.671	ENSSDUG00000023789	mtrex	100	92.671	Seriola_dumerili
ENSTRUG00000014571	mtrex	100	92.671	ENSSLDG00000006301	mtrex	100	92.671	Seriola_lalandi_dorsalis
ENSTRUG00000014571	mtrex	95	86.178	ENSSARG00000008387	MTREX	100	81.268	Sorex_araneus
ENSTRUG00000014571	mtrex	89	84.743	ENSSPUG00000007071	MTREX	96	84.743	Sphenodon_punctatus
ENSTRUG00000014571	mtrex	100	88.104	ENSSPAG00000011319	mtrex	100	88.008	Stegastes_partitus
ENSTRUG00000014571	mtrex	100	82.952	ENSSSCG00000016911	MTREX	100	83.048	Sus_scrofa
ENSTRUG00000014571	mtrex	100	81.496	ENSTGUG00000002480	MTREX	100	81.496	Taeniopygia_guttata
ENSTRUG00000014571	mtrex	100	68.416	ENSTBEG00000007769	MTREX	100	68.571	Tupaia_belangeri
ENSTRUG00000014571	mtrex	100	82.887	ENSTTRG00000008678	MTREX	100	82.762	Tursiops_truncatus
ENSTRUG00000014571	mtrex	100	82.667	ENSUAMG00000023061	MTREX	100	82.592	Ursus_americanus
ENSTRUG00000014571	mtrex	100	82.901	ENSUMAG00000009373	MTREX	99	88.128	Ursus_maritimus
ENSTRUG00000014571	mtrex	100	74.095	ENSVPAG00000011174	MTREX	94	81.342	Vicugna_pacos
ENSTRUG00000014571	mtrex	100	82.952	ENSVVUG00000021337	MTREX	100	82.876	Vulpes_vulpes
ENSTRUG00000014571	mtrex	100	82.964	ENSXETG00000032798	MTREX	100	82.964	Xenopus_tropicalis
ENSTRUG00000014571	mtrex	100	91.032	ENSXMAG00000004799	mtrex	100	91.032	Xiphophorus_maculatus