EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000014923 (Gene tree)
Gene ID: 101073935
Gene Symbol: prpf3
Alias: HPRP3|wu:fa11f05
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4327 bases
Position: chrHE591902.1:75730-80056
Accession: 101073935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000038145	PRP3	PF08572.10	8e-76	1	1
ENSTRUP00000038145	PWI	PF01480.17	7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000038282	-	2010	XM_011617069	ENSTRUP00000038145	669 (aa)	XP_011615371	H2UMH4

Gene Model

Click here to download ENSTRUG00000014923's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000014923's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000014923	prpf3	99	71.635	ENSG00000117360	PRPF3	100	71.925	Homo_sapiens
ENSTRUG00000014923	prpf3	100	83.095	ENSAPOG00000015584	prpf3	100	83.095	Acanthochromis_polyacanthus
ENSTRUG00000014923	prpf3	99	71.635	ENSAMEG00000001630	PRPF3	100	71.925	Ailuropoda_melanoleuca
ENSTRUG00000014923	prpf3	100	82.117	ENSACIG00000007876	prpf3	100	82.117	Amphilophus_citrinellus
ENSTRUG00000014923	prpf3	100	83.095	ENSAOCG00000011449	prpf3	100	83.262	Amphiprion_ocellaris
ENSTRUG00000014923	prpf3	100	84.527	ENSATEG00000023583	prpf3	100	84.527	Anabas_testudineus
ENSTRUG00000014923	prpf3	99	72.754	ENSAPLG00000002440	PRPF3	100	72.754	Anas_platyrhynchos
ENSTRUG00000014923	prpf3	99	71.284	ENSACAG00000003176	PRPF3	100	71.758	Anolis_carolinensis
ENSTRUG00000014923	prpf3	99	71.635	ENSANAG00000026138	PRPF3	100	71.925	Aotus_nancymaae
ENSTRUG00000014923	prpf3	100	83.994	ENSACLG00000020127	prpf3	100	83.994	Astatotilapia_calliptera
ENSTRUG00000014923	prpf3	100	77.433	ENSAMXG00000007306	prpf3	100	77.010	Astyanax_mexicanus
ENSTRUG00000014923	prpf3	99	71.635	ENSBTAG00000013946	PRPF3	100	71.925	Bos_taurus
ENSTRUG00000014923	prpf3	83	38.908	WBGene00010844	prp-3	96	36.364	Caenorhabditis_elegans
ENSTRUG00000014923	prpf3	99	71.635	ENSCJAG00000009926	PRPF3	100	71.925	Callithrix_jacchus
ENSTRUG00000014923	prpf3	99	71.635	ENSCAFG00000011820	PRPF3	100	71.925	Canis_familiaris
ENSTRUG00000014923	prpf3	80	71.351	ENSCAFG00020019653	PRPF3	100	71.892	Canis_lupus_dingo
ENSTRUG00000014923	prpf3	99	71.635	ENSCHIG00000015434	PRPF3	100	71.925	Capra_hircus
ENSTRUG00000014923	prpf3	99	70.893	ENSTSYG00000001383	PRPF3	100	71.182	Carlito_syrichta
ENSTRUG00000014923	prpf3	93	63.391	ENSCAPG00000017812	PRPF3	95	63.233	Cavia_aperea
ENSTRUG00000014923	prpf3	99	70.809	ENSCPOG00000008068	PRPF3	100	71.098	Cavia_porcellus
ENSTRUG00000014923	prpf3	99	71.635	ENSCCAG00000026380	PRPF3	100	71.925	Cebus_capucinus
ENSTRUG00000014923	prpf3	99	59.568	ENSCATG00000041778	PRPF3	100	59.856	Cercocebus_atys
ENSTRUG00000014923	prpf3	99	71.780	ENSCLAG00000015009	PRPF3	100	72.069	Chinchilla_lanigera
ENSTRUG00000014923	prpf3	77	79.359	ENSCHOG00000011645	PRPF3	77	79.004	Choloepus_hoffmanni
ENSTRUG00000014923	prpf3	99	71.079	ENSCPBG00000008216	PRPF3	100	71.367	Chrysemys_picta_bellii
ENSTRUG00000014923	prpf3	61	60.680	ENSCING00000003312	-	99	60.680	Ciona_intestinalis
ENSTRUG00000014923	prpf3	81	54.219	ENSCSAVG00000008720	-	94	54.578	Ciona_savignyi
ENSTRUG00000014923	prpf3	99	71.201	ENSCANG00000036769	PRPF3	100	71.491	Colobus_angolensis_palliatus
ENSTRUG00000014923	prpf3	99	71.635	ENSCGRG00001019100	Prpf3	100	71.925	Cricetulus_griseus_chok1gshd
ENSTRUG00000014923	prpf3	99	71.635	ENSCGRG00000007322	Prpf3	100	71.925	Cricetulus_griseus_crigri
ENSTRUG00000014923	prpf3	100	80.595	ENSCSEG00000002532	prpf3	100	81.020	Cynoglossus_semilaevis
ENSTRUG00000014923	prpf3	100	81.897	ENSCVAG00000009318	prpf3	100	81.897	Cyprinodon_variegatus
ENSTRUG00000014923	prpf3	100	78.857	ENSDARG00000086425	prpf3	100	78.857	Danio_rerio
ENSTRUG00000014923	prpf3	99	68.321	ENSDNOG00000005904	PRPF3	100	68.175	Dasypus_novemcinctus
ENSTRUG00000014923	prpf3	92	70.561	ENSDORG00000008664	Prpf3	99	70.872	Dipodomys_ordii
ENSTRUG00000014923	prpf3	81	52.297	FBgn0036915	Prp3	99	52.432	Drosophila_melanogaster
ENSTRUG00000014923	prpf3	99	70.605	ENSETEG00000019124	PRPF3	100	70.893	Echinops_telfairi
ENSTRUG00000014923	prpf3	100	59.973	ENSEBUG00000011680	prpf3	99	60.298	Eptatretus_burgeri
ENSTRUG00000014923	prpf3	99	71.491	ENSEASG00005001566	PRPF3	100	71.780	Equus_asinus_asinus
ENSTRUG00000014923	prpf3	99	71.635	ENSECAG00000019840	PRPF3	100	71.925	Equus_caballus
ENSTRUG00000014923	prpf3	84	72.665	ENSEEUG00000007338	PRPF3	85	72.437	Erinaceus_europaeus
ENSTRUG00000014923	prpf3	100	73.043	ENSELUG00000013624	prpf3	100	73.188	Esox_lucius
ENSTRUG00000014923	prpf3	99	71.635	ENSFCAG00000013940	PRPF3	100	71.925	Felis_catus
ENSTRUG00000014923	prpf3	99	72.069	ENSFDAG00000010365	PRPF3	100	72.359	Fukomys_damarensis
ENSTRUG00000014923	prpf3	100	83.212	ENSFHEG00000021746	prpf3	100	83.212	Fundulus_heteroclitus
ENSTRUG00000014923	prpf3	100	78.348	ENSGMOG00000008535	prpf3	100	78.348	Gadus_morhua
ENSTRUG00000014923	prpf3	99	72.899	ENSGALG00000028205	PRPF3	100	72.899	Gallus_gallus
ENSTRUG00000014923	prpf3	100	81.214	ENSGAFG00000012671	prpf3	100	81.214	Gambusia_affinis
ENSTRUG00000014923	prpf3	100	81.081	ENSGACG00000011792	prpf3	100	81.081	Gasterosteus_aculeatus
ENSTRUG00000014923	prpf3	99	71.079	ENSGAGG00000013765	PRPF3	100	73.036	Gopherus_agassizii
ENSTRUG00000014923	prpf3	85	77.219	ENSGGOG00000013174	PRPF3	100	76.923	Gorilla_gorilla
ENSTRUG00000014923	prpf3	100	83.406	ENSHBUG00000003493	prpf3	100	83.406	Haplochromis_burtoni
ENSTRUG00000014923	prpf3	99	71.780	ENSHGLG00000016569	PRPF3	100	72.069	Heterocephalus_glaber_female
ENSTRUG00000014923	prpf3	99	54.357	ENSHGLG00000016033	-	100	54.210	Heterocephalus_glaber_female
ENSTRUG00000014923	prpf3	99	71.780	ENSHGLG00100007590	PRPF3	100	72.069	Heterocephalus_glaber_male
ENSTRUG00000014923	prpf3	99	54.130	ENSHGLG00100008951	-	100	53.982	Heterocephalus_glaber_male
ENSTRUG00000014923	prpf3	100	78.857	ENSHCOG00000014058	prpf3	100	78.970	Hippocampus_comes
ENSTRUG00000014923	prpf3	100	77.240	ENSIPUG00000000902	PRPF3	100	77.240	Ictalurus_punctatus
ENSTRUG00000014923	prpf3	99	71.635	ENSSTOG00000001889	PRPF3	100	71.925	Ictidomys_tridecemlineatus
ENSTRUG00000014923	prpf3	100	81.116	ENSKMAG00000001390	prpf3	100	81.116	Kryptolebias_marmoratus
ENSTRUG00000014923	prpf3	100	83.333	ENSLBEG00000026310	prpf3	100	83.333	Labrus_bergylta
ENSTRUG00000014923	prpf3	93	67.445	ENSLACG00000010541	PRPF3	100	67.290	Latimeria_chalumnae
ENSTRUG00000014923	prpf3	99	71.635	ENSLAFG00000004713	PRPF3	100	71.925	Loxodonta_africana
ENSTRUG00000014923	prpf3	99	71.635	ENSMFAG00000039791	PRPF3	100	71.925	Macaca_fascicularis
ENSTRUG00000014923	prpf3	89	72.285	ENSMMUG00000016301	PRPF3	97	72.771	Macaca_mulatta
ENSTRUG00000014923	prpf3	99	71.635	ENSMNEG00000038161	PRPF3	100	71.925	Macaca_nemestrina
ENSTRUG00000014923	prpf3	99	50.223	ENSMLEG00000041065	-	97	50.446	Mandrillus_leucophaeus
ENSTRUG00000014923	prpf3	85	77.219	ENSMLEG00000040609	PRPF3	100	76.923	Mandrillus_leucophaeus
ENSTRUG00000014923	prpf3	100	81.624	ENSMAMG00000014968	prpf3	100	81.624	Mastacembelus_armatus
ENSTRUG00000014923	prpf3	100	81.445	ENSMZEG00005015970	prpf3	100	81.445	Maylandia_zebra
ENSTRUG00000014923	prpf3	99	72.899	ENSMGAG00000000707	PRPF3	100	72.899	Meleagris_gallopavo
ENSTRUG00000014923	prpf3	99	71.635	ENSMAUG00000017112	Prpf3	100	71.925	Mesocricetus_auratus
ENSTRUG00000014923	prpf3	99	70.954	ENSMICG00000015386	PRPF3	100	73.070	Microcebus_murinus
ENSTRUG00000014923	prpf3	99	71.635	ENSMOCG00000000242	Prpf3	100	71.925	Microtus_ochrogaster
ENSTRUG00000014923	prpf3	100	81.977	ENSMMOG00000016131	prpf3	100	82.029	Mola_mola
ENSTRUG00000014923	prpf3	99	72.006	ENSMODG00000018774	PRPF3	100	72.294	Monodelphis_domestica
ENSTRUG00000014923	prpf3	100	80.580	ENSMALG00000007257	prpf3	100	80.725	Monopterus_albus
ENSTRUG00000014923	prpf3	99	70.520	MGP_CAROLIEiJ_G0025354	Prpf3	100	70.809	Mus_caroli
ENSTRUG00000014923	prpf3	99	70.520	ENSMUSG00000015748	Prpf3	100	70.809	Mus_musculus
ENSTRUG00000014923	prpf3	99	71.076	MGP_PahariEiJ_G0026798	Prpf3	100	71.366	Mus_pahari
ENSTRUG00000014923	prpf3	99	70.520	MGP_SPRETEiJ_G0026298	Prpf3	100	70.809	Mus_spretus
ENSTRUG00000014923	prpf3	99	69.986	ENSMPUG00000005080	PRPF3	100	70.274	Mustela_putorius_furo
ENSTRUG00000014923	prpf3	99	71.965	ENSMLUG00000004646	-	100	72.254	Myotis_lucifugus
ENSTRUG00000014923	prpf3	99	71.635	ENSNGAG00000000910	Prpf3	100	71.925	Nannospalax_galili
ENSTRUG00000014923	prpf3	100	80.618	ENSNBRG00000003462	prpf3	100	80.618	Neolamprologus_brichardi
ENSTRUG00000014923	prpf3	89	72.285	ENSNLEG00000009841	PRPF3	99	72.771	Nomascus_leucogenys
ENSTRUG00000014923	prpf3	82	64.412	ENSMEUG00000008733	PRPF3	89	64.118	Notamacropus_eugenii
ENSTRUG00000014923	prpf3	99	70.809	ENSOPRG00000010139	PRPF3	100	71.098	Ochotona_princeps
ENSTRUG00000014923	prpf3	99	54.993	ENSODEG00000014412	-	100	55.137	Octodon_degus
ENSTRUG00000014923	prpf3	99	70.809	ENSODEG00000011363	-	100	71.098	Octodon_degus
ENSTRUG00000014923	prpf3	100	81.586	ENSONIG00000006394	prpf3	100	81.870	Oreochromis_niloticus
ENSTRUG00000014923	prpf3	99	56.440	ENSOANG00000015441	PRPF3	100	56.440	Ornithorhynchus_anatinus
ENSTRUG00000014923	prpf3	99	71.635	ENSOCUG00000011760	PRPF3	100	71.925	Oryctolagus_cuniculus
ENSTRUG00000014923	prpf3	100	82.471	ENSORLG00000010330	prpf3	100	82.040	Oryzias_latipes
ENSTRUG00000014923	prpf3	100	82.353	ENSORLG00020009054	prpf3	100	82.040	Oryzias_latipes_hni
ENSTRUG00000014923	prpf3	100	82.184	ENSORLG00015015016	prpf3	100	81.753	Oryzias_latipes_hsok
ENSTRUG00000014923	prpf3	100	83.070	ENSOMEG00000000940	prpf3	100	83.190	Oryzias_melastigma
ENSTRUG00000014923	prpf3	99	67.677	ENSOGAG00000005352	PRPF3	100	67.821	Otolemur_garnettii
ENSTRUG00000014923	prpf3	99	71.635	ENSOARG00000020798	PRPF3	100	71.925	Ovis_aries
ENSTRUG00000014923	prpf3	98	55.947	ENSPPAG00000043769	-	99	55.279	Pan_paniscus
ENSTRUG00000014923	prpf3	99	71.491	ENSPPAG00000030983	PRPF3	100	71.780	Pan_paniscus
ENSTRUG00000014923	prpf3	99	71.635	ENSPPRG00000000731	PRPF3	100	71.925	Panthera_pardus
ENSTRUG00000014923	prpf3	99	71.635	ENSPTIG00000005516	PRPF3	100	71.925	Panthera_tigris_altaica
ENSTRUG00000014923	prpf3	98	55.066	ENSPTRG00000047819	-	99	54.399	Pan_troglodytes
ENSTRUG00000014923	prpf3	99	71.635	ENSPTRG00000001254	PRPF3	100	71.925	Pan_troglodytes
ENSTRUG00000014923	prpf3	99	71.491	ENSPANG00000000499	PRPF3	100	71.780	Papio_anubis
ENSTRUG00000014923	prpf3	100	78.317	ENSPKIG00000010501	prpf3	100	78.031	Paramormyrops_kingsleyae
ENSTRUG00000014923	prpf3	99	71.758	ENSPSIG00000014877	PRPF3	100	71.758	Pelodiscus_sinensis
ENSTRUG00000014923	prpf3	100	75.780	ENSPMGG00000007776	prpf3	100	75.632	Periophthalmus_magnuspinnatus
ENSTRUG00000014923	prpf3	99	71.635	ENSPEMG00000011672	Prpf3	100	71.925	Peromyscus_maniculatus_bairdii
ENSTRUG00000014923	prpf3	63	70.481	ENSPMAG00000005588	prpf3	97	70.481	Petromyzon_marinus
ENSTRUG00000014923	prpf3	99	72.006	ENSPCIG00000008795	PRPF3	100	72.294	Phascolarctos_cinereus
ENSTRUG00000014923	prpf3	100	80.484	ENSPFOG00000013638	prpf3	100	80.912	Poecilia_formosa
ENSTRUG00000014923	prpf3	100	81.792	ENSPLAG00000018103	prpf3	100	81.792	Poecilia_latipinna
ENSTRUG00000014923	prpf3	100	81.936	ENSPMEG00000023546	prpf3	100	81.936	Poecilia_mexicana
ENSTRUG00000014923	prpf3	100	81.358	ENSPREG00000017216	prpf3	100	81.358	Poecilia_reticulata
ENSTRUG00000014923	prpf3	93	70.762	ENSPPYG00000000900	PRPF3	99	71.073	Pongo_abelii
ENSTRUG00000014923	prpf3	75	61.759	ENSPPYG00000018646	-	100	62.452	Pongo_abelii
ENSTRUG00000014923	prpf3	87	73.401	ENSPCAG00000014908	PRPF3	86	73.737	Procavia_capensis
ENSTRUG00000014923	prpf3	99	71.780	ENSPCOG00000013828	PRPF3	100	72.069	Propithecus_coquereli
ENSTRUG00000014923	prpf3	99	70.665	ENSPVAG00000013472	PRPF3	100	70.954	Pteropus_vampyrus
ENSTRUG00000014923	prpf3	100	83.261	ENSPNYG00000004279	prpf3	100	83.261	Pundamilia_nyererei
ENSTRUG00000014923	prpf3	100	78.420	ENSPNAG00000001799	prpf3	100	78.138	Pygocentrus_nattereri
ENSTRUG00000014923	prpf3	99	70.665	ENSRNOG00000025629	Prpf3	100	70.954	Rattus_norvegicus
ENSTRUG00000014923	prpf3	82	70.213	ENSRBIG00000028854	PRPF3	98	69.504	Rhinopithecus_bieti
ENSTRUG00000014923	prpf3	99	71.635	ENSRROG00000027464	PRPF3	100	71.925	Rhinopithecus_roxellana
ENSTRUG00000014923	prpf3	99	65.412	ENSSBOG00000033104	PRPF3	100	65.702	Saimiri_boliviensis_boliviensis
ENSTRUG00000014923	prpf3	99	71.614	ENSSHAG00000009548	PRPF3	100	71.902	Sarcophilus_harrisii
ENSTRUG00000014923	prpf3	100	77.356	ENSSFOG00015022014	prpf3	100	76.934	Scleropages_formosus
ENSTRUG00000014923	prpf3	100	81.268	ENSSMAG00000015739	prpf3	100	81.268	Scophthalmus_maximus
ENSTRUG00000014923	prpf3	100	81.341	ENSSDUG00000006840	prpf3	100	81.341	Seriola_dumerili
ENSTRUG00000014923	prpf3	100	81.742	ENSSLDG00000015423	prpf3	100	82.584	Seriola_lalandi_dorsalis
ENSTRUG00000014923	prpf3	99	71.491	ENSSARG00000011064	PRPF3	100	71.780	Sorex_araneus
ENSTRUG00000014923	prpf3	99	71.469	ENSSPUG00000000809	PRPF3	100	70.697	Sphenodon_punctatus
ENSTRUG00000014923	prpf3	100	81.791	ENSSPAG00000018721	prpf3	100	82.812	Stegastes_partitus
ENSTRUG00000014923	prpf3	99	71.635	ENSSSCG00000030119	PRPF3	100	73.921	Sus_scrofa
ENSTRUG00000014923	prpf3	99	63.081	ENSTGUG00000004552	PRPF3	100	62.936	Taeniopygia_guttata
ENSTRUG00000014923	prpf3	99	90.754	ENSTNIG00000008058	prpf3	100	90.469	Tetraodon_nigroviridis
ENSTRUG00000014923	prpf3	80	70.843	ENSTBEG00000014072	PRPF3	88	71.982	Tupaia_belangeri
ENSTRUG00000014923	prpf3	99	66.281	ENSTTRG00000010616	PRPF3	100	66.570	Tursiops_truncatus
ENSTRUG00000014923	prpf3	81	74.101	ENSUAMG00000009345	PRPF3	100	73.921	Ursus_americanus
ENSTRUG00000014923	prpf3	99	71.635	ENSUMAG00000003720	PRPF3	100	71.925	Ursus_maritimus
ENSTRUG00000014923	prpf3	88	76.765	ENSVPAG00000005425	PRPF3	89	76.538	Vicugna_pacos
ENSTRUG00000014923	prpf3	99	71.635	ENSVVUG00000007933	PRPF3	100	71.925	Vulpes_vulpes
ENSTRUG00000014923	prpf3	99	69.771	ENSXETG00000018654	prpf3	100	70.201	Xenopus_tropicalis
ENSTRUG00000014923	prpf3	100	81.792	ENSXMAG00000016347	prpf3	100	81.792	Xiphophorus_maculatus