EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000014990 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 10345 bases
Position: chr8:12192707-12203051
Accession: 101074344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000038304	ResIII	PF04851.15	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000038441	-	4911	XM_011606714	ENSTRUP00000038304	1636 (aa)	XP_011605016	H2UMY3

Gene Model

Click here to download ENSTRUG00000014990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000014990's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000014990	chd3	85	72.453	ENSTRUG00000007623	-	75	72.404
ENSTRUG00000014990	chd3	92	67.430	ENSTRUG00000007202	-	81	69.863
ENSTRUG00000014990	chd3	52	37.570	ENSTRUG00000006682	chd8	87	42.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000014990	chd3	89	76.335	ENSG00000170004	CHD3	99	67.225	Homo_sapiens
ENSTRUG00000014990	chd3	84	89.564	ENSAPOG00000005614	chd3	83	89.635	Acanthochromis_polyacanthus
ENSTRUG00000014990	chd3	60	80.241	ENSAMEG00000003025	-	67	84.607	Ailuropoda_melanoleuca
ENSTRUG00000014990	chd3	83	90.397	ENSACIG00000019671	chd3	87	91.480	Amphilophus_citrinellus
ENSTRUG00000014990	chd3	89	91.728	ENSAOCG00000023784	chd3	88	89.028	Amphiprion_ocellaris
ENSTRUG00000014990	chd3	92	88.053	ENSAPEG00000006341	chd3	79	85.714	Amphiprion_percula
ENSTRUG00000014990	chd3	97	84.615	ENSATEG00000000848	chd3	85	86.889	Anabas_testudineus
ENSTRUG00000014990	chd3	89	76.923	ENSACAG00000004276	CHD3	71	77.778	Anolis_carolinensis
ENSTRUG00000014990	chd3	86	78.144	ENSANAG00000034323	CHD3	76	77.869	Aotus_nancymaae
ENSTRUG00000014990	chd3	89	88.283	ENSACLG00000009222	chd3	93	87.159	Astatotilapia_calliptera
ENSTRUG00000014990	chd3	89	76.439	ENSBTAG00000014377	CHD3	75	76.764	Bos_taurus
ENSTRUG00000014990	chd3	93	74.037	ENSCJAG00000014766	CHD3	76	74.742	Callithrix_jacchus
ENSTRUG00000014990	chd3	89	76.370	ENSCAFG00000016859	CHD3	74	76.693	Canis_familiaris
ENSTRUG00000014990	chd3	86	78.076	ENSCAFG00020007422	CHD3	77	78.007	Canis_lupus_dingo
ENSTRUG00000014990	chd3	89	76.238	ENSCHIG00000016737	CHD3	75	76.560	Capra_hircus
ENSTRUG00000014990	chd3	89	76.335	ENSTSYG00000035658	CHD3	75	76.560	Carlito_syrichta
ENSTRUG00000014990	chd3	89	72.889	ENSCAPG00000014864	CHD3	73	73.307	Cavia_aperea
ENSTRUG00000014990	chd3	89	75.989	ENSCPOG00000022653	CHD3	74	76.428	Cavia_porcellus
ENSTRUG00000014990	chd3	89	76.335	ENSCCAG00000034792	CHD3	74	76.560	Cebus_capucinus
ENSTRUG00000014990	chd3	89	76.269	ENSCATG00000041717	CHD3	77	74.410	Cercocebus_atys
ENSTRUG00000014990	chd3	95	72.520	ENSCLAG00000010523	CHD3	77	76.494	Chinchilla_lanigera
ENSTRUG00000014990	chd3	89	76.272	ENSCSAG00000011122	CHD3	77	74.600	Chlorocebus_sabaeus
ENSTRUG00000014990	chd3	89	80.136	ENSCPBG00000011966	CHD3	96	79.345	Chrysemys_picta_bellii
ENSTRUG00000014990	chd3	89	76.269	ENSCANG00000037641	CHD3	77	74.410	Colobus_angolensis_palliatus
ENSTRUG00000014990	chd3	95	72.570	ENSCGRG00001011306	Chd3	77	76.443	Cricetulus_griseus_chok1gshd
ENSTRUG00000014990	chd3	89	71.909	ENSCGRG00000007878	Chd3	75	75.424	Cricetulus_griseus_crigri
ENSTRUG00000014990	chd3	89	90.631	ENSCSEG00000004489	chd3	81	90.593	Cynoglossus_semilaevis
ENSTRUG00000014990	chd3	88	90.566	ENSCVAG00000007293	chd3	81	90.566	Cyprinodon_variegatus
ENSTRUG00000014990	chd3	91	83.024	ENSDARG00000021405	chd3	81	83.169	Danio_rerio
ENSTRUG00000014990	chd3	84	81.900	ENSDNOG00000047846	CHD3	67	86.585	Dasypus_novemcinctus
ENSTRUG00000014990	chd3	89	76.370	ENSDORG00000010713	Chd3	77	76.560	Dipodomys_ordii
ENSTRUG00000014990	chd3	89	70.929	ENSETEG00000017733	CHD3	77	71.116	Echinops_telfairi
ENSTRUG00000014990	chd3	65	74.839	ENSEBUG00000008310	chd3	71	74.380	Eptatretus_burgeri
ENSTRUG00000014990	chd3	83	77.911	ENSEASG00005019360	CHD3	76	77.911	Equus_asinus_asinus
ENSTRUG00000014990	chd3	83	77.911	ENSECAG00000010051	CHD3	76	77.911	Equus_caballus
ENSTRUG00000014990	chd3	89	70.429	ENSEEUG00000015205	CHD3	75	70.651	Erinaceus_europaeus
ENSTRUG00000014990	chd3	83	82.679	ENSELUG00000019499	chd3	90	82.935	Esox_lucius
ENSTRUG00000014990	chd3	95	73.362	ENSFCAG00000009629	CHD3	72	76.959	Felis_catus
ENSTRUG00000014990	chd3	86	77.923	ENSFDAG00000008220	CHD3	72	77.648	Fukomys_damarensis
ENSTRUG00000014990	chd3	89	73.656	ENSGMOG00000013599	chd3	74	85.556	Gadus_morhua
ENSTRUG00000014990	chd3	69	88.147	ENSGAFG00000004055	chd3	99	89.405	Gambusia_affinis
ENSTRUG00000014990	chd3	93	78.602	ENSGACG00000019275	chd3	81	78.050	Gasterosteus_aculeatus
ENSTRUG00000014990	chd3	77	80.808	ENSGAGG00000013164	CHD3	91	78.298	Gopherus_agassizii
ENSTRUG00000014990	chd3	89	76.269	ENSGGOG00000013496	CHD3	75	76.494	Gorilla_gorilla
ENSTRUG00000014990	chd3	89	76.172	ENSHGLG00000012017	CHD3	74	76.295	Heterocephalus_glaber_female
ENSTRUG00000014990	chd3	76	83.529	ENSHGLG00100013902	CHD3	76	83.643	Heterocephalus_glaber_male
ENSTRUG00000014990	chd3	97	81.303	ENSHCOG00000010170	chd3	82	81.582	Hippocampus_comes
ENSTRUG00000014990	chd3	84	85.043	ENSIPUG00000003271	chd3	82	83.508	Ictalurus_punctatus
ENSTRUG00000014990	chd3	93	73.814	ENSSTOG00000025907	CHD3	77	76.494	Ictidomys_tridecemlineatus
ENSTRUG00000014990	chd3	89	76.568	ENSJJAG00000017633	Chd3	77	76.560	Jaculus_jaculus
ENSTRUG00000014990	chd3	90	90.148	ENSKMAG00000019292	chd3	81	88.904	Kryptolebias_marmoratus
ENSTRUG00000014990	chd3	89	87.348	ENSLBEG00000028485	chd3	77	88.079	Labrus_bergylta
ENSTRUG00000014990	chd3	87	74.272	ENSLACG00000008031	CHD3	79	72.693	Latimeria_chalumnae
ENSTRUG00000014990	chd3	93	78.752	ENSLOCG00000013965	chd3	74	81.543	Lepisosteus_oculatus
ENSTRUG00000014990	chd3	93	72.675	ENSLAFG00000000572	CHD3	78	75.450	Loxodonta_africana
ENSTRUG00000014990	chd3	89	76.269	ENSMFAG00000020113	CHD3	78	73.645	Macaca_fascicularis
ENSTRUG00000014990	chd3	89	74.391	ENSMMUG00000022221	CHD3	76	73.168	Macaca_mulatta
ENSTRUG00000014990	chd3	89	76.269	ENSMNEG00000001728	CHD3	78	75.000	Macaca_nemestrina
ENSTRUG00000014990	chd3	89	76.269	ENSMLEG00000032249	CHD3	77	74.410	Mandrillus_leucophaeus
ENSTRUG00000014990	chd3	85	89.514	ENSMAMG00000000564	chd3	83	91.301	Mastacembelus_armatus
ENSTRUG00000014990	chd3	96	71.902	ENSMAUG00000013873	Chd3	73	77.999	Mesocricetus_auratus
ENSTRUG00000014990	chd3	93	74.018	ENSMICG00000008741	CHD3	72	76.760	Microcebus_murinus
ENSTRUG00000014990	chd3	96	72.025	ENSMOCG00000004848	Chd3	77	76.244	Microtus_ochrogaster
ENSTRUG00000014990	chd3	94	87.372	ENSMMOG00000012699	chd3	85	87.636	Mola_mola
ENSTRUG00000014990	chd3	87	75.747	ENSMODG00000007509	CHD3	77	78.211	Monodelphis_domestica
ENSTRUG00000014990	chd3	89	75.594	MGP_CAROLIEiJ_G0016564	Chd3	79	76.311	Mus_caroli
ENSTRUG00000014990	chd3	95	72.384	ENSMUSG00000018474	Chd3	78	76.311	Mus_musculus
ENSTRUG00000014990	chd3	95	73.110	MGP_PahariEiJ_G0017695	Chd3	78	76.560	Mus_pahari
ENSTRUG00000014990	chd3	95	72.446	MGP_SPRETEiJ_G0017400	Chd3	78	76.311	Mus_spretus
ENSTRUG00000014990	chd3	77	79.612	ENSMPUG00000008861	CHD3	74	79.612	Mustela_putorius_furo
ENSTRUG00000014990	chd3	89	75.908	ENSMLUG00000014643	-	74	76.428	Myotis_lucifugus
ENSTRUG00000014990	chd3	95	73.110	ENSNGAG00000000773	Chd3	74	76.560	Nannospalax_galili
ENSTRUG00000014990	chd3	83	89.363	ENSNBRG00000000636	chd3	83	88.062	Neolamprologus_brichardi
ENSTRUG00000014990	chd3	89	75.198	ENSNLEG00000009770	CHD3	77	75.282	Nomascus_leucogenys
ENSTRUG00000014990	chd3	79	77.234	ENSMEUG00000005852	CHD3	68	77.234	Notamacropus_eugenii
ENSTRUG00000014990	chd3	86	77.510	ENSOPRG00000011069	CHD3	76	77.235	Ochotona_princeps
ENSTRUG00000014990	chd3	89	76.106	ENSODEG00000017785	CHD3	74	76.494	Octodon_degus
ENSTRUG00000014990	chd3	94	88.232	ENSONIG00000009292	chd3	83	86.109	Oreochromis_niloticus
ENSTRUG00000014990	chd3	93	72.872	ENSOCUG00000029299	CHD3	75	74.685	Oryctolagus_cuniculus
ENSTRUG00000014990	chd3	88	90.318	ENSORLG00000007107	chd3	87	90.664	Oryzias_latipes
ENSTRUG00000014990	chd3	67	85.162	ENSORLG00020008387	chd3	94	86.104	Oryzias_latipes_hni
ENSTRUG00000014990	chd3	83	90.188	ENSOMEG00000013691	chd3	87	86.635	Oryzias_melastigma
ENSTRUG00000014990	chd3	89	75.246	ENSOGAG00000003216	CHD3	75	76.693	Otolemur_garnettii
ENSTRUG00000014990	chd3	89	75.936	ENSOARG00000017855	CHD3	73	76.395	Ovis_aries
ENSTRUG00000014990	chd3	89	74.351	ENSPPAG00000032886	CHD3	75	74.478	Pan_paniscus
ENSTRUG00000014990	chd3	89	76.568	ENSPPRG00000000626	CHD3	75	76.892	Panthera_pardus
ENSTRUG00000014990	chd3	89	76.335	ENSPTRG00000008714	CHD3	75	76.560	Pan_troglodytes
ENSTRUG00000014990	chd3	89	76.269	ENSPANG00000023938	CHD3	78	73.645	Papio_anubis
ENSTRUG00000014990	chd3	97	79.951	ENSPKIG00000006305	chd3	79	79.697	Paramormyrops_kingsleyae
ENSTRUG00000014990	chd3	65	78.327	ENSPSIG00000010177	CHD3	98	78.623	Pelodiscus_sinensis
ENSTRUG00000014990	chd3	89	75.726	ENSPEMG00000014262	Chd3	75	76.443	Peromyscus_maniculatus_bairdii
ENSTRUG00000014990	chd3	87	82.589	ENSPCIG00000005442	CHD3	81	78.616	Phascolarctos_cinereus
ENSTRUG00000014990	chd3	94	85.635	ENSPFOG00000012464	chd3	77	83.976	Poecilia_formosa
ENSTRUG00000014990	chd3	88	88.459	ENSPLAG00000002887	chd3	92	86.380	Poecilia_latipinna
ENSTRUG00000014990	chd3	67	84.950	ENSPMEG00000016725	chd3	91	87.008	Poecilia_mexicana
ENSTRUG00000014990	chd3	89	88.799	ENSPREG00000011044	chd3	81	88.050	Poecilia_reticulata
ENSTRUG00000014990	chd3	89	73.650	ENSPPYG00000007940	CHD3	75	73.453	Pongo_abelii
ENSTRUG00000014990	chd3	85	84.375	ENSPCAG00000004350	CHD3	72	84.375	Procavia_capensis
ENSTRUG00000014990	chd3	89	76.137	ENSPCOG00000020952	CHD3	76	74.474	Propithecus_coquereli
ENSTRUG00000014990	chd3	70	82.432	ENSPVAG00000016344	CHD3	60	82.432	Pteropus_vampyrus
ENSTRUG00000014990	chd3	89	86.318	ENSPNAG00000020393	chd3	82	86.931	Pygocentrus_nattereri
ENSTRUG00000014990	chd3	89	73.698	ENSRNOG00000009722	Chd3	76	77.574	Rattus_norvegicus
ENSTRUG00000014990	chd3	89	73.913	ENSRBIG00000033562	CHD3	78	73.200	Rhinopithecus_bieti
ENSTRUG00000014990	chd3	89	76.269	ENSRROG00000029554	CHD3	78	73.849	Rhinopithecus_roxellana
ENSTRUG00000014990	chd3	89	76.335	ENSSBOG00000020719	CHD3	76	77.314	Saimiri_boliviensis_boliviensis
ENSTRUG00000014990	chd3	89	76.140	ENSSHAG00000014412	CHD3	77	76.518	Sarcophilus_harrisii
ENSTRUG00000014990	chd3	79	86.913	ENSSFOG00015023123	chd3	74	86.913	Scleropages_formosus
ENSTRUG00000014990	chd3	91	84.640	ENSSMAG00000006451	chd3	84	90.330	Scophthalmus_maximus
ENSTRUG00000014990	chd3	65	86.007	ENSSDUG00000005792	chd3	96	87.418	Seriola_dumerili
ENSTRUG00000014990	chd3	89	91.661	ENSSPAG00000013694	chd3	86	89.265	Stegastes_partitus
ENSTRUG00000014990	chd3	93	74.237	ENSSSCG00000021363	CHD3	81	78.202	Sus_scrofa
ENSTRUG00000014990	chd3	93	88.846	ENSTNIG00000012998	chd3	80	86.316	Tetraodon_nigroviridis
ENSTRUG00000014990	chd3	65	83.568	ENSTBEG00000011454	-	62	83.568	Tupaia_belangeri
ENSTRUG00000014990	chd3	85	82.842	ENSTTRG00000010295	CHD3	72	81.395	Tursiops_truncatus
ENSTRUG00000014990	chd3	89	75.116	ENSUAMG00000005475	CHD3	82	74.784	Ursus_americanus
ENSTRUG00000014990	chd3	56	89.164	ENSVPAG00000010794	-	56	89.164	Vicugna_pacos
ENSTRUG00000014990	chd3	89	76.370	ENSVVUG00000028011	CHD3	75	78.007	Vulpes_vulpes
ENSTRUG00000014990	chd3	93	67.327	ENSXETG00000012991	chd3	71	69.548	Xenopus_tropicalis
ENSTRUG00000014990	chd3	65	90.146	ENSXCOG00000000809	chd3	93	91.377	Xiphophorus_couchianus
ENSTRUG00000014990	chd3	83	88.495	ENSXMAG00000016035	chd3	88	89.508	Xiphophorus_maculatus