EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000015295 (Gene tree)
Gene ID: 105417680
Gene Symbol: -
Alias: -
Full Name: RNA exonuclease 5
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 5219 bases
Position: chr17:5713870-5719088
Accession: 105417680
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000039073	RRM_1	PF00076.22	1.1e-12	1	1
ENSTRUP00000048469	RRM_1	PF00076.22	1.1e-12	1	1
ENSTRUP00000039073	RNase_T	PF00929.24	1.3e-06	1	1
ENSTRUP00000048469	RNase_T	PF00929.24	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000039214	-	2451	XM_011612827	ENSTRUP00000039073	816 (aa)	XP_011611129	H2UQ52
ENSTRUT00000050353	-	2535	-	ENSTRUP00000048469	844 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000015295's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000015295's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000015295	-	93	34.821	ENSG00000005189	REXO5	99	59.859	Homo_sapiens
ENSTRUG00000015295	-	96	64.994	ENSAPOG00000008514	REXO5	99	64.059	Acanthochromis_polyacanthus
ENSTRUG00000015295	-	98	33.573	ENSAMEG00000006178	REXO5	99	33.573	Ailuropoda_melanoleuca
ENSTRUG00000015295	-	51	63.636	ENSAOCG00000003481	-	85	56.090	Amphiprion_ocellaris
ENSTRUG00000015295	-	96	64.232	ENSAPEG00000010627	REXO5	98	64.232	Amphiprion_percula
ENSTRUG00000015295	-	74	69.421	ENSATEG00000004682	REXO5	97	70.816	Anabas_testudineus
ENSTRUG00000015295	-	92	35.346	ENSAPLG00000015740	REXO5	99	35.422	Anas_platyrhynchos
ENSTRUG00000015295	-	90	34.967	ENSACAG00000009744	REXO5	92	34.967	Anolis_carolinensis
ENSTRUG00000015295	-	90	34.293	ENSANAG00000034379	REXO5	91	34.293	Aotus_nancymaae
ENSTRUG00000015295	-	77	56.406	ENSACLG00000004778	REXO5	99	56.406	Astatotilapia_calliptera
ENSTRUG00000015295	-	98	34.262	ENSBTAG00000006449	REXO5	97	34.140	Bos_taurus
ENSTRUG00000015295	-	91	34.850	ENSCJAG00000009363	REXO5	86	46.269	Callithrix_jacchus
ENSTRUG00000015295	-	93	34.474	ENSCAFG00000017924	REXO5	98	34.146	Canis_familiaris
ENSTRUG00000015295	-	93	34.137	ENSCAFG00020021846	REXO5	75	39.249	Canis_lupus_dingo
ENSTRUG00000015295	-	98	34.836	ENSCHIG00000022443	REXO5	98	34.836	Capra_hircus
ENSTRUG00000015295	-	97	33.333	ENSCPOG00000008940	REXO5	92	36.466	Cavia_porcellus
ENSTRUG00000015295	-	90	34.817	ENSCCAG00000034936	REXO5	91	34.817	Cebus_capucinus
ENSTRUG00000015295	-	93	35.361	ENSCATG00000044063	REXO5	94	35.361	Cercocebus_atys
ENSTRUG00000015295	-	97	33.698	ENSCLAG00000008033	REXO5	93	33.698	Chinchilla_lanigera
ENSTRUG00000015295	-	93	35.361	ENSCSAG00000007562	REXO5	94	35.361	Chlorocebus_sabaeus
ENSTRUG00000015295	-	96	34.432	ENSCPBG00000019062	REXO5	87	34.469	Chrysemys_picta_bellii
ENSTRUG00000015295	-	93	35.234	ENSCANG00000035776	REXO5	94	35.234	Colobus_angolensis_palliatus
ENSTRUG00000015295	-	96	33.785	ENSCGRG00001016179	-	99	33.785	Cricetulus_griseus_chok1gshd
ENSTRUG00000015295	-	96	33.785	ENSCGRG00000010868	-	91	42.675	Cricetulus_griseus_crigri
ENSTRUG00000015295	-	69	54.049	ENSCSEG00000002060	-	99	53.873	Cynoglossus_semilaevis
ENSTRUG00000015295	-	53	65.957	ENSCVAG00000014887	-	84	65.957	Cyprinodon_variegatus
ENSTRUG00000015295	-	92	35.121	ENSEASG00005007266	REXO5	90	43.269	Equus_asinus_asinus
ENSTRUG00000015295	-	98	34.173	ENSECAG00000018769	REXO5	89	34.173	Equus_caballus
ENSTRUG00000015295	-	80	50.000	ENSEEUG00000003572	REXO5	84	50.000	Erinaceus_europaeus
ENSTRUG00000015295	-	97	33.660	ENSFCAG00000015160	REXO5	98	33.660	Felis_catus
ENSTRUG00000015295	-	90	35.556	ENSFALG00000014026	REXO5	97	35.556	Ficedula_albicollis
ENSTRUG00000015295	-	98	57.108	ENSFHEG00000013388	REXO5	99	57.353	Fundulus_heteroclitus
ENSTRUG00000015295	-	94	33.776	ENSGALG00000002239	REXO5	98	33.776	Gallus_gallus
ENSTRUG00000015295	-	97	53.856	ENSGAFG00000011045	REXO5	98	54.401	Gambusia_affinis
ENSTRUG00000015295	-	96	33.859	ENSGAGG00000008242	REXO5	98	33.738	Gopherus_agassizii
ENSTRUG00000015295	-	93	34.872	ENSGGOG00000004539	REXO5	74	40.171	Gorilla_gorilla
ENSTRUG00000015295	-	96	56.838	ENSHBUG00000017976	REXO5	99	56.838	Haplochromis_burtoni
ENSTRUG00000015295	-	86	31.317	ENSHGLG00000012652	REXO5	99	32.410	Heterocephalus_glaber_female
ENSTRUG00000015295	-	93	32.690	ENSHGLG00100013255	REXO5	88	41.769	Heterocephalus_glaber_male
ENSTRUG00000015295	-	65	54.360	ENSHCOG00000008648	REXO5	94	54.917	Hippocampus_comes
ENSTRUG00000015295	-	67	40.250	ENSSTOG00000007071	REXO5	81	40.250	Ictidomys_tridecemlineatus
ENSTRUG00000015295	-	91	34.788	ENSJJAG00000023821	-	93	34.259	Jaculus_jaculus
ENSTRUG00000015295	-	98	58.128	ENSKMAG00000009488	REXO5	99	58.128	Kryptolebias_marmoratus
ENSTRUG00000015295	-	97	63.535	ENSLBEG00000009276	REXO5	99	63.535	Labrus_bergylta
ENSTRUG00000015295	-	78	37.004	ENSLACG00000001758	REXO5	99	37.500	Latimeria_chalumnae
ENSTRUG00000015295	-	90	35.000	ENSLAFG00000006157	REXO5	92	35.000	Loxodonta_africana
ENSTRUG00000015295	-	93	35.361	ENSMFAG00000036613	REXO5	94	35.361	Macaca_fascicularis
ENSTRUG00000015295	-	93	35.361	ENSMMUG00000016748	REXO5	94	35.361	Macaca_mulatta
ENSTRUG00000015295	-	93	35.361	ENSMNEG00000045028	REXO5	94	35.361	Macaca_nemestrina
ENSTRUG00000015295	-	93	35.361	ENSMLEG00000029851	REXO5	94	35.361	Mandrillus_leucophaeus
ENSTRUG00000015295	-	99	62.850	ENSMAMG00000006915	REXO5	97	62.728	Mastacembelus_armatus
ENSTRUG00000015295	-	96	56.085	ENSMZEG00005013657	REXO5	99	56.085	Maylandia_zebra
ENSTRUG00000015295	-	90	35.104	ENSMGAG00000010369	REXO5	97	35.104	Meleagris_gallopavo
ENSTRUG00000015295	-	93	34.810	ENSMICG00000014886	REXO5	94	34.810	Microcebus_murinus
ENSTRUG00000015295	-	51	39.080	ENSMOCG00000010062	-	88	40.049	Microtus_ochrogaster
ENSTRUG00000015295	-	50	72.340	ENSMMOG00000011330	-	83	72.340	Mola_mola
ENSTRUG00000015295	-	90	35.398	ENSMODG00000007059	REXO5	87	35.145	Monodelphis_domestica
ENSTRUG00000015295	-	91	32.500	MGP_CAROLIEiJ_G0030385	-	92	32.063	Mus_caroli
ENSTRUG00000015295	-	91	33.770	ENSMUSG00000030924	Rexo5	91	39.234	Mus_musculus
ENSTRUG00000015295	-	91	33.465	MGP_SPRETEiJ_G0031499	-	92	33.465	Mus_spretus
ENSTRUG00000015295	-	98	34.620	ENSMPUG00000013643	REXO5	99	34.620	Mustela_putorius_furo
ENSTRUG00000015295	-	91	34.987	ENSNGAG00000002025	-	91	42.553	Nannospalax_galili
ENSTRUG00000015295	-	68	51.323	ENSNBRG00000006877	REXO5	90	57.623	Neolamprologus_brichardi
ENSTRUG00000015295	-	93	35.414	ENSNLEG00000012334	REXO5	94	35.414	Nomascus_leucogenys
ENSTRUG00000015295	-	91	33.596	ENSMEUG00000015298	REXO5	98	33.160	Notamacropus_eugenii
ENSTRUG00000015295	-	73	58.125	ENSOPRG00000011398	REXO5	72	58.125	Ochotona_princeps
ENSTRUG00000015295	-	96	56.587	ENSONIG00000000148	REXO5	99	59.552	Oreochromis_niloticus
ENSTRUG00000015295	-	90	37.778	ENSOANG00000014291	REXO5	98	37.778	Ornithorhynchus_anatinus
ENSTRUG00000015295	-	90	35.209	ENSOCUG00000009913	REXO5	90	35.209	Oryctolagus_cuniculus
ENSTRUG00000015295	-	97	57.516	ENSORLG00000009738	REXO5	99	57.516	Oryzias_latipes
ENSTRUG00000015295	-	97	57.214	ENSORLG00020010270	REXO5	99	57.214	Oryzias_latipes_hni
ENSTRUG00000015295	-	97	56.841	ENSORLG00015009678	REXO5	99	56.841	Oryzias_latipes_hsok
ENSTRUG00000015295	-	96	56.943	ENSOMEG00000019491	REXO5	99	56.675	Oryzias_melastigma
ENSTRUG00000015295	-	93	33.291	ENSOGAG00000011564	REXO5	94	33.291	Otolemur_garnettii
ENSTRUG00000015295	-	98	34.714	ENSOARG00000013401	REXO5	99	34.223	Ovis_aries
ENSTRUG00000015295	-	93	34.766	ENSPPAG00000035005	REXO5	74	39.898	Pan_paniscus
ENSTRUG00000015295	-	90	44.275	ENSPPRG00000022345	REXO5	97	44.935	Panthera_pardus
ENSTRUG00000015295	-	97	33.535	ENSPTIG00000012096	REXO5	98	33.741	Panthera_tigris_altaica
ENSTRUG00000015295	-	93	34.766	ENSPTRG00000007851	REXO5	74	39.898	Pan_troglodytes
ENSTRUG00000015295	-	93	35.361	ENSPANG00000006898	REXO5	94	35.361	Papio_anubis
ENSTRUG00000015295	-	90	41.022	ENSPKIG00000014406	REXO5	94	41.022	Paramormyrops_kingsleyae
ENSTRUG00000015295	-	96	33.978	ENSPSIG00000012172	REXO5	86	34.626	Pelodiscus_sinensis
ENSTRUG00000015295	-	85	47.701	ENSPCIG00000029238	-	92	34.969	Phascolarctos_cinereus
ENSTRUG00000015295	-	97	55.732	ENSPFOG00000012767	REXO5	99	55.976	Poecilia_formosa
ENSTRUG00000015295	-	97	55.854	ENSPLAG00000006408	REXO5	99	56.098	Poecilia_latipinna
ENSTRUG00000015295	-	97	55.814	ENSPMEG00000007726	REXO5	99	56.059	Poecilia_mexicana
ENSTRUG00000015295	-	97	55.692	ENSPREG00000000146	REXO5	99	55.692	Poecilia_reticulata
ENSTRUG00000015295	-	93	34.777	ENSPPYG00000007163	REXO5	74	39.829	Pongo_abelii
ENSTRUG00000015295	-	88	33.649	ENSPCAG00000006265	REXO5	89	34.673	Procavia_capensis
ENSTRUG00000015295	-	95	34.027	ENSPCOG00000018775	REXO5	98	34.027	Propithecus_coquereli
ENSTRUG00000015295	-	90	34.794	ENSPVAG00000003293	REXO5	97	34.794	Pteropus_vampyrus
ENSTRUG00000015295	-	81	52.994	ENSPNYG00000006922	REXO5	92	56.678	Pundamilia_nyererei
ENSTRUG00000015295	-	97	40.025	ENSPNAG00000018866	-	99	40.025	Pygocentrus_nattereri
ENSTRUG00000015295	-	91	33.068	ENSRNOG00000014513	Rexo5	93	33.068	Rattus_norvegicus
ENSTRUG00000015295	-	93	35.369	ENSRBIG00000035163	REXO5	76	45.358	Rhinopithecus_bieti
ENSTRUG00000015295	-	93	35.369	ENSRROG00000034741	REXO5	94	35.332	Rhinopithecus_roxellana
ENSTRUG00000015295	-	90	35.000	ENSSBOG00000029650	REXO5	94	35.148	Saimiri_boliviensis_boliviensis
ENSTRUG00000015295	-	90	37.124	ENSSHAG00000005042	REXO5	92	36.294	Sarcophilus_harrisii
ENSTRUG00000015295	-	91	41.558	ENSSFOG00015007581	REXO5	93	41.429	Scleropages_formosus
ENSTRUG00000015295	-	98	60.806	ENSSMAG00000000709	REXO5	99	60.632	Scophthalmus_maximus
ENSTRUG00000015295	-	96	63.250	ENSSDUG00000014528	REXO5	99	63.022	Seriola_dumerili
ENSTRUG00000015295	-	96	63.990	ENSSLDG00000007641	REXO5	98	63.490	Seriola_lalandi_dorsalis
ENSTRUG00000015295	-	52	73.913	ENSSPAG00000007050	-	83	73.913	Stegastes_partitus
ENSTRUG00000015295	-	97	34.670	ENSSSCG00000007855	REXO5	98	34.670	Sus_scrofa
ENSTRUG00000015295	-	90	36.115	ENSTGUG00000009219	REXO5	97	35.533	Taeniopygia_guttata
ENSTRUG00000015295	-	66	35.602	ENSTBEG00000008797	REXO5	70	36.298	Tupaia_belangeri
ENSTRUG00000015295	-	91	35.038	ENSTTRG00000016439	REXO5	91	35.310	Tursiops_truncatus
ENSTRUG00000015295	-	86	35.090	ENSUAMG00000017756	REXO5	99	35.090	Ursus_americanus
ENSTRUG00000015295	-	93	31.425	ENSVPAG00000003459	REXO5	74	35.678	Vicugna_pacos
ENSTRUG00000015295	-	93	34.474	ENSVVUG00000023257	REXO5	94	34.474	Vulpes_vulpes
ENSTRUG00000015295	-	89	32.480	ENSXETG00000016735	rexo5	95	32.480	Xenopus_tropicalis
ENSTRUG00000015295	-	91	43.067	ENSXCOG00000015997	REXO5	98	43.067	Xiphophorus_couchianus
ENSTRUG00000015295	-	97	57.108	ENSXMAG00000014770	REXO5	99	57.108	Xiphophorus_maculatus