EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000015354 (Gene tree)
Gene ID: 101062432
Gene Symbol: grsf1
Alias: wu:fb62c04|zgc:153305
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 4172 bases
Position: chr21:12210595-12214766
Accession: 101062432
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000039239	RRM_1	PF00076.22	3.7e-24	1	2
ENSTRUP00000039239	RRM_1	PF00076.22	3.7e-24	2	2
ENSTRUP00000039241	RRM_1	PF00076.22	3.7e-24	1	2
ENSTRUP00000039241	RRM_1	PF00076.22	3.7e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000039382	-	2634	XM_011615934	ENSTRUP00000039241	386 (aa)	XP_011614236	H2UQL8
ENSTRUT00000039380	-	2832	XM_011615935	ENSTRUP00000039239	386 (aa)	XP_011614237	H2UQL6

Gene Model

Click here to download ENSTRUG00000015354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000015354's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000015354	grsf1	74	30.144	ENSTRUG00000013738	rbm12b	71	30.144
ENSTRUG00000015354	grsf1	75	43.344	ENSTRUG00000020069	hnrnph1	85	43.827
ENSTRUG00000015354	grsf1	75	47.541	ENSTRUG00000023443	hnrnph3	82	47.541

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000015354	grsf1	99	60.859	ENSAPOG00000012487	grsf1	96	61.198	Acanthochromis_polyacanthus
ENSTRUG00000015354	grsf1	99	61.757	ENSACIG00000005871	grsf1	96	61.867	Amphilophus_citrinellus
ENSTRUG00000015354	grsf1	99	61.519	ENSAOCG00000017462	-	96	61.880	Amphiprion_ocellaris
ENSTRUG00000015354	grsf1	99	61.055	ENSAPEG00000007240	-	96	61.399	Amphiprion_percula
ENSTRUG00000015354	grsf1	100	60.358	ENSATEG00000007185	grsf1	97	59.894	Anabas_testudineus
ENSTRUG00000015354	grsf1	99	59.398	ENSACLG00000003685	-	96	59.432	Astatotilapia_calliptera
ENSTRUG00000015354	grsf1	99	50.325	ENSAMXG00000012270	grsf1	98	50.325	Astyanax_mexicanus
ENSTRUG00000015354	grsf1	100	57.500	ENSCSEG00000019209	-	99	56.305	Cynoglossus_semilaevis
ENSTRUG00000015354	grsf1	100	58.247	ENSCVAG00000004476	grsf1	97	58.511	Cyprinodon_variegatus
ENSTRUG00000015354	grsf1	84	51.840	ENSDARG00000053021	grsf1	79	51.840	Danio_rerio
ENSTRUG00000015354	grsf1	100	45.320	ENSFHEG00000013358	-	96	46.429	Fundulus_heteroclitus
ENSTRUG00000015354	grsf1	76	67.273	ENSGMOG00000014047	grsf1	81	67.273	Gadus_morhua
ENSTRUG00000015354	grsf1	99	56.219	ENSGAFG00000004496	grsf1	97	56.154	Gambusia_affinis
ENSTRUG00000015354	grsf1	76	58.824	ENSGACG00000014447	grsf1	99	58.824	Gasterosteus_aculeatus
ENSTRUG00000015354	grsf1	99	59.296	ENSHBUG00000006284	grsf1	96	59.326	Haplochromis_burtoni
ENSTRUG00000015354	grsf1	99	53.535	ENSHCOG00000007715	-	91	56.461	Hippocampus_comes
ENSTRUG00000015354	grsf1	95	50.802	ENSIPUG00000010533	grsf1	96	50.802	Ictalurus_punctatus
ENSTRUG00000015354	grsf1	100	52.257	ENSKMAG00000004528	grsf1	90	55.236	Kryptolebias_marmoratus
ENSTRUG00000015354	grsf1	76	53.356	ENSLBEG00000018100	grsf1	94	53.691	Labrus_bergylta
ENSTRUG00000015354	grsf1	99	60.902	ENSMAMG00000002627	grsf1	96	61.240	Mastacembelus_armatus
ENSTRUG00000015354	grsf1	99	59.148	ENSMZEG00005020633	-	96	59.173	Maylandia_zebra
ENSTRUG00000015354	grsf1	95	63.934	ENSMMOG00000014231	grsf1	95	63.934	Mola_mola
ENSTRUG00000015354	grsf1	99	61.235	ENSMALG00000000251	grsf1	96	61.578	Monopterus_albus
ENSTRUG00000015354	grsf1	99	59.091	ENSNBRG00000017774	grsf1	93	59.115	Neolamprologus_brichardi
ENSTRUG00000015354	grsf1	99	61.905	ENSONIG00000014119	grsf1	96	62.016	Oreochromis_niloticus
ENSTRUG00000015354	grsf1	99	57.252	ENSORLG00000030211	grsf1	91	59.669	Oryzias_latipes
ENSTRUG00000015354	grsf1	99	57.250	ENSORLG00020014383	grsf1	91	59.229	Oryzias_latipes_hni
ENSTRUG00000015354	grsf1	99	57.286	ENSORLG00015006520	grsf1	91	59.116	Oryzias_latipes_hsok
ENSTRUG00000015354	grsf1	90	58.678	ENSOMEG00000009181	grsf1	94	58.953	Oryzias_melastigma
ENSTRUG00000015354	grsf1	86	54.913	ENSPKIG00000019432	grsf1	84	54.913	Paramormyrops_kingsleyae
ENSTRUG00000015354	grsf1	81	62.388	ENSPMGG00000013654	grsf1	91	62.388	Periophthalmus_magnuspinnatus
ENSTRUG00000015354	grsf1	99	56.585	ENSPFOG00000006122	grsf1	97	56.784	Poecilia_formosa
ENSTRUG00000015354	grsf1	99	57.389	ENSPLAG00000020977	grsf1	97	57.360	Poecilia_latipinna
ENSTRUG00000015354	grsf1	99	56.341	ENSPMEG00000012485	grsf1	97	56.818	Poecilia_mexicana
ENSTRUG00000015354	grsf1	99	56.404	ENSPREG00000013383	grsf1	97	56.853	Poecilia_reticulata
ENSTRUG00000015354	grsf1	99	60.759	ENSPNYG00000005379	grsf1	96	60.836	Pundamilia_nyererei
ENSTRUG00000015354	grsf1	90	54.545	ENSPNAG00000014912	grsf1	82	54.545	Pygocentrus_nattereri
ENSTRUG00000015354	grsf1	85	45.697	ENSSFOG00015014620	grsf1	85	45.697	Scleropages_formosus
ENSTRUG00000015354	grsf1	81	62.145	ENSSMAG00000014181	grsf1	69	62.145	Scophthalmus_maximus
ENSTRUG00000015354	grsf1	100	60.969	ENSSDUG00000009397	-	94	67.450	Seriola_dumerili
ENSTRUG00000015354	grsf1	100	61.480	ENSSLDG00000025494	grsf1	98	60.907	Seriola_lalandi_dorsalis
ENSTRUG00000015354	grsf1	100	54.660	ENSSPAG00000023296	grsf1	96	55.065	Stegastes_partitus
ENSTRUG00000015354	grsf1	83	70.164	ENSTNIG00000015350	-	99	71.569	Tetraodon_nigroviridis
ENSTRUG00000015354	grsf1	100	55.831	ENSXMAG00000029710	grsf1	97	55.754	Xiphophorus_maculatus