EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000015366 (Gene tree)
Gene ID: 101076300
Gene Symbol: patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 5397 bases
Position: chr19:5883020-5888416
Accession: 101076300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000039272	zf-C2H2	PF00096.26	1.7e-30	1	5
ENSTRUP00000039272	zf-C2H2	PF00096.26	1.7e-30	2	5
ENSTRUP00000039272	zf-C2H2	PF00096.26	1.7e-30	3	5
ENSTRUP00000039272	zf-C2H2	PF00096.26	1.7e-30	4	5
ENSTRUP00000039272	zf-C2H2	PF00096.26	1.7e-30	5	5
ENSTRUP00000039269	zf-C2H2	PF00096.26	2e-30	1	5
ENSTRUP00000039269	zf-C2H2	PF00096.26	2e-30	2	5
ENSTRUP00000039269	zf-C2H2	PF00096.26	2e-30	3	5
ENSTRUP00000039269	zf-C2H2	PF00096.26	2e-30	4	5
ENSTRUP00000039269	zf-C2H2	PF00096.26	2e-30	5	5
ENSTRUP00000039272	zf-met	PF12874.7	4.3e-07	1	1
ENSTRUP00000039269	zf-met	PF12874.7	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000039413	-	2046	-	ENSTRUP00000039272	681 (aa)	-	H2UQP9
ENSTRUT00000039410	-	2079	XM_003973311	ENSTRUP00000039269	692 (aa)	XP_003973360	H2UQP6

Gene Model

Click here to download ENSTRUG00000015366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000015366's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000015366	patz1	55	31.343	ENSTRUG00000025597	znf646	56	31.343
ENSTRUG00000015366	patz1	52	32.301	ENSTRUG00000022066	-	87	32.624
ENSTRUG00000015366	patz1	52	31.933	ENSTRUG00000002959	zbtb16a	56	31.933
ENSTRUG00000015366	patz1	50	32.039	ENSTRUG00000009203	zbtb41	56	32.039
ENSTRUG00000015366	patz1	59	33.193	ENSTRUG00000021765	-	62	33.645
ENSTRUG00000015366	patz1	51	33.721	ENSTRUG00000021675	-	64	36.170
ENSTRUG00000015366	patz1	65	40.876	ENSTRUG00000023816	zbtb47b	62	40.876
ENSTRUG00000015366	patz1	64	33.617	ENSTRUG00000024073	-	62	36.686
ENSTRUG00000015366	patz1	58	34.586	ENSTRUG00000014476	-	83	34.586
ENSTRUG00000015366	patz1	53	36.145	ENSTRUG00000006180	si:ch211-216l23.1	51	36.145
ENSTRUG00000015366	patz1	55	39.157	ENSTRUG00000019483	-	97	39.157
ENSTRUG00000015366	patz1	54	34.711	ENSTRUG00000013220	bcl6b	60	34.711
ENSTRUG00000015366	patz1	61	35.172	ENSTRUG00000006896	-	88	34.074
ENSTRUG00000015366	patz1	62	33.858	ENSTRUG00000003454	-	75	36.429
ENSTRUG00000015366	patz1	55	34.409	ENSTRUG00000022843	-	64	34.409
ENSTRUG00000015366	patz1	52	35.185	ENSTRUG00000017456	znf236	60	35.238
ENSTRUG00000015366	patz1	62	38.095	ENSTRUG00000022076	-	81	36.257
ENSTRUG00000015366	patz1	88	35.484	ENSTRUG00000003277	zbtb17	92	42.857
ENSTRUG00000015366	patz1	68	38.255	ENSTRUG00000000995	-	71	38.255
ENSTRUG00000015366	patz1	60	32.203	ENSTRUG00000025881	-	72	31.356
ENSTRUG00000015366	patz1	57	33.333	ENSTRUG00000023491	-	78	33.333
ENSTRUG00000015366	patz1	74	36.126	ENSTRUG00000001268	-	91	39.860
ENSTRUG00000015366	patz1	59	36.179	ENSTRUG00000005321	-	99	35.366
ENSTRUG00000015366	patz1	71	39.815	ENSTRUG00000004140	ZBTB14	92	36.111
ENSTRUG00000015366	patz1	57	34.302	ENSTRUG00000012273	-	80	34.302
ENSTRUG00000015366	patz1	66	37.640	ENSTRUG00000020236	zbtb24	67	38.554
ENSTRUG00000015366	patz1	65	32.773	ENSTRUG00000013906	-	92	32.773
ENSTRUG00000015366	patz1	52	30.622	ENSTRUG00000012157	-	81	31.132
ENSTRUG00000015366	patz1	62	36.257	ENSTRUG00000015687	-	91	36.145

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000015366	patz1	100	57.676	ENSG00000100105	PATZ1	100	58.264	Homo_sapiens
ENSTRUG00000015366	patz1	100	85.294	ENSAPOG00000018447	patz1	100	82.260	Acanthochromis_polyacanthus
ENSTRUG00000015366	patz1	100	57.931	ENSAMEG00000007074	PATZ1	100	58.069	Ailuropoda_melanoleuca
ENSTRUG00000015366	patz1	100	82.302	ENSACIG00000016779	patz1	100	82.302	Amphilophus_citrinellus
ENSTRUG00000015366	patz1	100	85.185	ENSAPEG00000013354	patz1	100	85.185	Amphiprion_percula
ENSTRUG00000015366	patz1	100	83.165	ENSATEG00000011260	patz1	100	83.165	Anabas_testudineus
ENSTRUG00000015366	patz1	88	57.668	ENSAPLG00000003934	PATZ1	99	57.668	Anas_platyrhynchos
ENSTRUG00000015366	patz1	100	57.676	ENSANAG00000029603	PATZ1	100	58.264	Aotus_nancymaae
ENSTRUG00000015366	patz1	96	87.755	ENSAMXG00000002273	patz1	100	63.919	Astyanax_mexicanus
ENSTRUG00000015366	patz1	100	59.417	ENSBTAG00000005478	PATZ1	100	57.655	Bos_taurus
ENSTRUG00000015366	patz1	100	57.676	ENSCJAG00000010978	PATZ1	100	58.264	Callithrix_jacchus
ENSTRUG00000015366	patz1	100	59.417	ENSCAFG00000013087	PATZ1	100	58.069	Canis_familiaris
ENSTRUG00000015366	patz1	100	59.417	ENSCHIG00000020203	PATZ1	100	57.931	Capra_hircus
ENSTRUG00000015366	patz1	100	57.931	ENSTSYG00000033183	PATZ1	100	58.516	Carlito_syrichta
ENSTRUG00000015366	patz1	100	57.676	ENSCCAG00000028772	PATZ1	100	58.264	Cebus_capucinus
ENSTRUG00000015366	patz1	100	57.815	ENSCATG00000006101	PATZ1	100	58.402	Cercocebus_atys
ENSTRUG00000015366	patz1	100	57.592	ENSCPBG00000011277	PATZ1	100	58.140	Chrysemys_picta_bellii
ENSTRUG00000015366	patz1	100	57.815	ENSCANG00000024972	PATZ1	100	58.402	Colobus_angolensis_palliatus
ENSTRUG00000015366	patz1	100	56.690	ENSCGRG00001004071	Patz1	100	56.414	Cricetulus_griseus_chok1gshd
ENSTRUG00000015366	patz1	93	56.828	ENSCGRG00000004814	Patz1	100	56.535	Cricetulus_griseus_crigri
ENSTRUG00000015366	patz1	100	77.163	ENSCSEG00000001385	patz1	100	77.684	Cynoglossus_semilaevis
ENSTRUG00000015366	patz1	100	78.255	ENSCVAG00000007684	patz1	100	78.156	Cyprinodon_variegatus
ENSTRUG00000015366	patz1	100	65.284	ENSDARG00000076584	patz1	100	65.284	Danio_rerio
ENSTRUG00000015366	patz1	89	57.055	ENSDNOG00000003183	PATZ1	100	57.362	Dasypus_novemcinctus
ENSTRUG00000015366	patz1	100	57.931	ENSDORG00000023834	Patz1	100	58.207	Dipodomys_ordii
ENSTRUG00000015366	patz1	100	57.793	ENSECAG00000025030	PATZ1	100	58.379	Equus_caballus
ENSTRUG00000015366	patz1	100	67.222	ENSELUG00000002333	patz1	100	67.222	Esox_lucius
ENSTRUG00000015366	patz1	100	59.417	ENSFCAG00000030253	PATZ1	100	58.069	Felis_catus
ENSTRUG00000015366	patz1	89	57.711	ENSFALG00000007450	PATZ1	99	57.711	Ficedula_albicollis
ENSTRUG00000015366	patz1	97	55.093	ENSFDAG00000005614	PATZ1	100	55.380	Fukomys_damarensis
ENSTRUG00000015366	patz1	100	75.426	ENSFHEG00000014755	patz1	100	75.426	Fundulus_heteroclitus
ENSTRUG00000015366	patz1	100	70.739	ENSGMOG00000001062	patz1	100	70.822	Gadus_morhua
ENSTRUG00000015366	patz1	100	56.852	ENSGALG00000006934	PATZ1	100	57.046	Gallus_gallus
ENSTRUG00000015366	patz1	100	78.000	ENSGAFG00000010053	patz1	100	78.429	Gambusia_affinis
ENSTRUG00000015366	patz1	88	58.080	ENSGAGG00000003214	PATZ1	100	58.080	Gopherus_agassizii
ENSTRUG00000015366	patz1	100	57.676	ENSGGOG00000017171	PATZ1	100	58.264	Gorilla_gorilla
ENSTRUG00000015366	patz1	100	76.025	ENSHCOG00000017644	patz1	99	71.391	Hippocampus_comes
ENSTRUG00000015366	patz1	100	63.624	ENSIPUG00000017653	patz1	99	63.624	Ictalurus_punctatus
ENSTRUG00000015366	patz1	100	57.538	ENSSTOG00000020707	PATZ1	100	57.538	Ictidomys_tridecemlineatus
ENSTRUG00000015366	patz1	99	57.961	ENSJJAG00000015259	Patz1	99	58.414	Jaculus_jaculus
ENSTRUG00000015366	patz1	100	79.598	ENSKMAG00000008157	patz1	100	79.598	Kryptolebias_marmoratus
ENSTRUG00000015366	patz1	100	58.790	ENSLAFG00000002317	PATZ1	100	58.790	Loxodonta_africana
ENSTRUG00000015366	patz1	100	57.815	ENSMFAG00000040968	PATZ1	100	58.402	Macaca_fascicularis
ENSTRUG00000015366	patz1	100	57.815	ENSMNEG00000037588	PATZ1	100	58.402	Macaca_nemestrina
ENSTRUG00000015366	patz1	100	57.815	ENSMLEG00000030938	PATZ1	100	58.402	Mandrillus_leucophaeus
ENSTRUG00000015366	patz1	100	86.402	ENSMAMG00000023652	patz1	100	86.402	Mastacembelus_armatus
ENSTRUG00000015366	patz1	88	54.386	ENSMGAG00000008439	PATZ1	100	54.386	Meleagris_gallopavo
ENSTRUG00000015366	patz1	100	58.207	ENSMAUG00000004129	Patz1	100	57.931	Mesocricetus_auratus
ENSTRUG00000015366	patz1	100	57.655	ENSMICG00000005430	PATZ1	100	57.967	Microcebus_murinus
ENSTRUG00000015366	patz1	100	58.127	ENSMOCG00000014488	Patz1	100	58.127	Microtus_ochrogaster
ENSTRUG00000015366	patz1	100	77.029	ENSMMOG00000021679	patz1	100	77.029	Mola_mola
ENSTRUG00000015366	patz1	100	82.734	ENSMALG00000021172	patz1	100	82.734	Monopterus_albus
ENSTRUG00000015366	patz1	100	58.402	MGP_CAROLIEiJ_G0016007	Patz1	100	58.402	Mus_caroli
ENSTRUG00000015366	patz1	100	58.402	ENSMUSG00000020453	Patz1	100	58.127	Mus_musculus
ENSTRUG00000015366	patz1	100	58.402	MGP_PahariEiJ_G0016884	Patz1	100	58.127	Mus_pahari
ENSTRUG00000015366	patz1	100	58.402	MGP_SPRETEiJ_G0016846	Patz1	99	59.806	Mus_spretus
ENSTRUG00000015366	patz1	100	59.612	ENSMLUG00000009942	PATZ1	100	58.069	Myotis_lucifugus
ENSTRUG00000015366	patz1	100	57.989	ENSNGAG00000010268	Patz1	100	57.989	Nannospalax_galili
ENSTRUG00000015366	patz1	100	84.892	ENSNBRG00000016032	patz1	100	84.892	Neolamprologus_brichardi
ENSTRUG00000015366	patz1	74	55.058	ENSMEUG00000016293	PATZ1	99	57.831	Notamacropus_eugenii
ENSTRUG00000015366	patz1	100	57.793	ENSODEG00000003589	PATZ1	100	58.069	Octodon_degus
ENSTRUG00000015366	patz1	100	81.429	ENSONIG00000004248	patz1	100	81.429	Oreochromis_niloticus
ENSTRUG00000015366	patz1	100	58.702	ENSOANG00000014654	PATZ1	100	59.034	Ornithorhynchus_anatinus
ENSTRUG00000015366	patz1	100	81.670	ENSORLG00020010937	patz1	100	79.149	Oryzias_latipes_hni
ENSTRUG00000015366	patz1	100	79.374	ENSORLG00015007396	patz1	100	79.374	Oryzias_latipes_hsok
ENSTRUG00000015366	patz1	100	76.547	ENSOMEG00000006636	patz1	100	76.547	Oryzias_melastigma
ENSTRUG00000015366	patz1	100	57.931	ENSOGAG00000027905	PATZ1	100	58.516	Otolemur_garnettii
ENSTRUG00000015366	patz1	100	57.676	ENSPPAG00000033227	PATZ1	100	58.264	Pan_paniscus
ENSTRUG00000015366	patz1	100	59.417	ENSPPRG00000001573	PATZ1	100	58.069	Panthera_pardus
ENSTRUG00000015366	patz1	89	57.920	ENSPTIG00000007937	PATZ1	90	57.920	Panthera_tigris_altaica
ENSTRUG00000015366	patz1	100	57.676	ENSPTRG00000014268	PATZ1	100	58.264	Pan_troglodytes
ENSTRUG00000015366	patz1	100	57.815	ENSPANG00000006821	PATZ1	100	58.402	Papio_anubis
ENSTRUG00000015366	patz1	100	68.234	ENSPKIG00000019584	patz1	100	68.803	Paramormyrops_kingsleyae
ENSTRUG00000015366	patz1	74	73.303	ENSPSIG00000011562	-	99	62.150	Pelodiscus_sinensis
ENSTRUG00000015366	patz1	60	57.009	ENSPSIG00000016553	-	96	54.853	Pelodiscus_sinensis
ENSTRUG00000015366	patz1	100	75.718	ENSPMGG00000010196	patz1	100	75.718	Periophthalmus_magnuspinnatus
ENSTRUG00000015366	patz1	100	57.989	ENSPEMG00000005321	Patz1	100	57.989	Peromyscus_maniculatus_bairdii
ENSTRUG00000015366	patz1	100	77.746	ENSPLAG00000010425	patz1	100	78.352	Poecilia_latipinna
ENSTRUG00000015366	patz1	100	79.487	ENSPMEG00000000255	patz1	100	79.915	Poecilia_mexicana
ENSTRUG00000015366	patz1	100	81.312	ENSPREG00000002440	patz1	100	81.740	Poecilia_reticulata
ENSTRUG00000015366	patz1	100	57.676	ENSPPYG00000011732	PATZ1	100	58.264	Pongo_abelii
ENSTRUG00000015366	patz1	100	57.655	ENSPCOG00000019729	PATZ1	100	58.242	Propithecus_coquereli
ENSTRUG00000015366	patz1	100	57.793	ENSPVAG00000001749	PATZ1	100	58.069	Pteropus_vampyrus
ENSTRUG00000015366	patz1	100	85.755	ENSPNYG00000013542	patz1	100	85.755	Pundamilia_nyererei
ENSTRUG00000015366	patz1	88	63.665	ENSPNAG00000017222	patz1	100	63.665	Pygocentrus_nattereri
ENSTRUG00000015366	patz1	100	57.815	ENSRBIG00000044231	PATZ1	100	58.402	Rhinopithecus_bieti
ENSTRUG00000015366	patz1	100	57.815	ENSRROG00000037155	PATZ1	100	58.402	Rhinopithecus_roxellana
ENSTRUG00000015366	patz1	100	57.676	ENSSBOG00000003894	PATZ1	100	58.264	Saimiri_boliviensis_boliviensis
ENSTRUG00000015366	patz1	83	89.130	ENSSFOG00015013244	patz1	77	89.130	Scleropages_formosus
ENSTRUG00000015366	patz1	99	56.708	ENSSPUG00000015298	PATZ1	97	57.400	Sphenodon_punctatus
ENSTRUG00000015366	patz1	88	59.756	ENSSSCG00000010027	PATZ1	100	57.742	Sus_scrofa
ENSTRUG00000015366	patz1	100	57.655	ENSTTRG00000010279	PATZ1	100	57.931	Tursiops_truncatus
ENSTRUG00000015366	patz1	100	59.417	ENSUAMG00000015014	PATZ1	100	54.633	Ursus_americanus
ENSTRUG00000015366	patz1	100	56.348	ENSXETG00000004190	patz1	100	56.286	Xenopus_tropicalis
ENSTRUG00000015366	patz1	100	78.561	ENSXMAG00000015531	patz1	100	78.984	Xiphophorus_maculatus