EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000015402 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 5583 bases
Position: chr1:21850545-21856127
Accession: 101065570
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000039374	RNase_Zc3h12a	PF11977.8	1.1e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000039515	-	1479	XM_011613359	ENSTRUP00000039374	492 (aa)	XP_011611661	H2UR01

Gene Model

Click here to download ENSTRUG00000015402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000015402's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000015402	-	65	55.623	ENSTRUG00000010565	si:dkey-206d17.12	50	59.060

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000015402	-	98	77.179	ENSACIG00000005689	-	73	85.776	Amphilophus_citrinellus
ENSTRUG00000015402	-	59	75.421	ENSAPLG00000003874	ZC3H12B	99	74.074	Anas_platyrhynchos
ENSTRUG00000015402	-	74	65.854	ENSECAG00000020993	ZC3H12B	66	69.528	Equus_caballus
ENSTRUG00000015402	-	58	74.476	ENSFALG00000004293	ZC3H12B	69	73.793	Ficedula_albicollis
ENSTRUG00000015402	-	97	79.494	ENSFHEG00000014717	-	75	86.869	Fundulus_heteroclitus
ENSTRUG00000015402	-	96	78.592	ENSGAFG00000004701	-	53	78.592	Gambusia_affinis
ENSTRUG00000015402	-	94	83.626	ENSHBUG00000003376	-	91	76.667	Haplochromis_burtoni
ENSTRUG00000015402	-	92	84.866	ENSMALG00000016807	-	81	79.856	Monopterus_albus
ENSTRUG00000015402	-	74	64.324	ENSMUSG00000035045	Zc3h12b	66	88.571	Mus_musculus
ENSTRUG00000015402	-	93	80.480	ENSORLG00000009188	-	74	78.979	Oryzias_latipes
ENSTRUG00000015402	-	93	80.480	ENSORLG00020019033	-	84	80.252	Oryzias_latipes_hni
ENSTRUG00000015402	-	94	76.771	ENSORLG00015020619	-	89	79.412	Oryzias_latipes_hsok
ENSTRUG00000015402	-	93	83.537	ENSOMEG00000018642	-	60	76.364	Oryzias_melastigma
ENSTRUG00000015402	-	94	83.626	ENSPNYG00000007151	-	90	76.316	Pundamilia_nyererei
ENSTRUG00000015402	-	74	64.595	ENSRNOG00000011508	Zc3h12b	67	70.130	Rattus_norvegicus
ENSTRUG00000015402	-	62	73.482	ENSSDUG00000014078	zc3h12b	83	69.828	Seriola_dumerili
ENSTRUG00000015402	-	71	90.123	ENSTNIG00000015684	-	58	90.123	Tetraodon_nigroviridis
ENSTRUG00000015402	-	94	77.586	ENSXCOG00000007996	-	86	83.333	Xiphophorus_couchianus