EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000015417 (Gene tree)
Gene ID: 101079611
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4574 bases
Position: chr16:1201675-1206248
Accession: 101079611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000039409	HAT	PF02184.16	1.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000039550	-	2160	XM_003971426	ENSTRUP00000039409	719 (aa)	XP_003971475	H2UR36

Gene Model

Click here to download ENSTRUG00000015417's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000015417's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000015417	crnkl1	90	79.529	ENSG00000101343	CRNKL1	98	80.149	Homo_sapiens
ENSTRUG00000015417	crnkl1	94	82.754	ENSAPOG00000009705	crnkl1	97	86.310	Acanthochromis_polyacanthus
ENSTRUG00000015417	crnkl1	89	80.267	ENSAMEG00000000270	CRNKL1	81	81.045	Ailuropoda_melanoleuca
ENSTRUG00000015417	crnkl1	92	85.159	ENSACIG00000015267	crnkl1	93	84.560	Amphilophus_citrinellus
ENSTRUG00000015417	crnkl1	92	84.218	ENSAOCG00000021964	crnkl1	92	84.218	Amphiprion_ocellaris
ENSTRUG00000015417	crnkl1	92	84.263	ENSAPEG00000015041	crnkl1	93	83.144	Amphiprion_percula
ENSTRUG00000015417	crnkl1	93	84.375	ENSATEG00000001068	crnkl1	88	87.164	Anabas_testudineus
ENSTRUG00000015417	crnkl1	88	80.480	ENSAPLG00000013105	CRNKL1	98	79.732	Anas_platyrhynchos
ENSTRUG00000015417	crnkl1	90	81.471	ENSACAG00000005284	CRNKL1	98	81.967	Anolis_carolinensis
ENSTRUG00000015417	crnkl1	83	80.000	ENSANAG00000024889	CRNKL1	99	80.000	Aotus_nancymaae
ENSTRUG00000015417	crnkl1	93	83.853	ENSACLG00000010813	crnkl1	99	79.920	Astatotilapia_calliptera
ENSTRUG00000015417	crnkl1	91	83.477	ENSAMXG00000018334	crnkl1	90	85.672	Astyanax_mexicanus
ENSTRUG00000015417	crnkl1	91	79.883	ENSBTAG00000008472	CRNKL1	99	78.390	Bos_taurus
ENSTRUG00000015417	crnkl1	88	59.527	WBGene00019762	M03F8.3	88	61.422	Caenorhabditis_elegans
ENSTRUG00000015417	crnkl1	90	79.823	ENSCJAG00000005393	CRNKL1	98	80.448	Callithrix_jacchus
ENSTRUG00000015417	crnkl1	90	79.941	ENSCAFG00000005333	CRNKL1	92	81.045	Canis_familiaris
ENSTRUG00000015417	crnkl1	91	80.088	ENSCAFG00020027488	CRNKL1	98	81.045	Canis_lupus_dingo
ENSTRUG00000015417	crnkl1	91	79.738	ENSCHIG00000013171	CRNKL1	99	77.966	Capra_hircus
ENSTRUG00000015417	crnkl1	91	79.356	ENSTSYG00000004197	CRNKL1	98	80.448	Carlito_syrichta
ENSTRUG00000015417	crnkl1	83	77.162	ENSCAPG00000010501	CRNKL1	97	77.815	Cavia_aperea
ENSTRUG00000015417	crnkl1	90	79.087	ENSCPOG00000004418	CRNKL1	98	79.701	Cavia_porcellus
ENSTRUG00000015417	crnkl1	90	79.971	ENSCCAG00000027037	CRNKL1	98	80.597	Cebus_capucinus
ENSTRUG00000015417	crnkl1	90	79.529	ENSCATG00000034247	CRNKL1	98	80.149	Cercocebus_atys
ENSTRUG00000015417	crnkl1	90	79.381	ENSCLAG00000013859	CRNKL1	98	80.149	Chinchilla_lanigera
ENSTRUG00000015417	crnkl1	90	79.529	ENSCSAG00000011434	CRNKL1	98	80.149	Chlorocebus_sabaeus
ENSTRUG00000015417	crnkl1	89	79.674	ENSCHOG00000006371	CRNKL1	82	80.448	Choloepus_hoffmanni
ENSTRUG00000015417	crnkl1	90	82.353	ENSCPBG00000023501	CRNKL1	98	83.010	Chrysemys_picta_bellii
ENSTRUG00000015417	crnkl1	88	65.512	ENSCING00000002709	-	98	65.075	Ciona_intestinalis
ENSTRUG00000015417	crnkl1	90	79.529	ENSCANG00000038789	CRNKL1	98	80.149	Colobus_angolensis_palliatus
ENSTRUG00000015417	crnkl1	90	79.676	ENSCGRG00001000687	-	97	80.299	Cricetulus_griseus_chok1gshd
ENSTRUG00000015417	crnkl1	90	79.676	ENSCGRG00001001115	-	97	80.299	Cricetulus_griseus_chok1gshd
ENSTRUG00000015417	crnkl1	90	79.676	ENSCGRG00000007854	Crnkl1	97	80.299	Cricetulus_griseus_crigri
ENSTRUG00000015417	crnkl1	91	84.480	ENSCSEG00000005594	crnkl1	85	85.501	Cynoglossus_semilaevis
ENSTRUG00000015417	crnkl1	88	86.057	ENSCVAG00000015172	crnkl1	93	83.792	Cyprinodon_variegatus
ENSTRUG00000015417	crnkl1	92	80.478	ENSDARG00000007901	crnkl1	89	84.352	Danio_rerio
ENSTRUG00000015417	crnkl1	90	80.118	ENSDNOG00000016226	CRNKL1	93	80.988	Dasypus_novemcinctus
ENSTRUG00000015417	crnkl1	88	74.887	ENSDORG00000023724	-	98	74.887	Dipodomys_ordii
ENSTRUG00000015417	crnkl1	90	78.832	ENSDORG00000000394	-	98	79.438	Dipodomys_ordii
ENSTRUG00000015417	crnkl1	88	74.063	ENSDORG00000030174	-	99	74.063	Dipodomys_ordii
ENSTRUG00000015417	crnkl1	89	64.254	FBgn0000377	crn	95	64.715	Drosophila_melanogaster
ENSTRUG00000015417	crnkl1	89	73.403	ENSETEG00000003711	CRNKL1	82	73.433	Echinops_telfairi
ENSTRUG00000015417	crnkl1	88	55.668	ENSEBUG00000013461	crnkl1	94	54.893	Eptatretus_burgeri
ENSTRUG00000015417	crnkl1	90	80.412	ENSEASG00005002072	CRNKL1	98	81.045	Equus_asinus_asinus
ENSTRUG00000015417	crnkl1	90	80.412	ENSECAG00000022215	CRNKL1	98	81.045	Equus_caballus
ENSTRUG00000015417	crnkl1	89	77.448	ENSEEUG00000000413	CRNKL1	90	78.209	Erinaceus_europaeus
ENSTRUG00000015417	crnkl1	89	84.558	ENSELUG00000015424	crnkl1	95	84.352	Esox_lucius
ENSTRUG00000015417	crnkl1	90	80.412	ENSFCAG00000000714	CRNKL1	98	81.045	Felis_catus
ENSTRUG00000015417	crnkl1	88	80.030	ENSFALG00000004611	CRNKL1	99	78.457	Ficedula_albicollis
ENSTRUG00000015417	crnkl1	90	79.529	ENSFDAG00000000604	CRNKL1	98	80.149	Fukomys_damarensis
ENSTRUG00000015417	crnkl1	89	85.757	ENSFHEG00000013163	crnkl1	98	79.947	Fundulus_heteroclitus
ENSTRUG00000015417	crnkl1	88	83.533	ENSGMOG00000007609	crnkl1	93	83.185	Gadus_morhua
ENSTRUG00000015417	crnkl1	90	80.441	ENSGALG00000008429	CRNKL1	98	81.315	Gallus_gallus
ENSTRUG00000015417	crnkl1	89	85.544	ENSGAFG00000014249	crnkl1	88	85.395	Gambusia_affinis
ENSTRUG00000015417	crnkl1	93	81.363	ENSGACG00000011852	crnkl1	90	85.268	Gasterosteus_aculeatus
ENSTRUG00000015417	crnkl1	86	81.607	ENSGAGG00000021233	CRNKL1	98	82.445	Gopherus_agassizii
ENSTRUG00000015417	crnkl1	90	79.529	ENSGGOG00000014176	CRNKL1	98	80.149	Gorilla_gorilla
ENSTRUG00000015417	crnkl1	95	82.531	ENSHBUG00000005246	crnkl1	99	80.212	Haplochromis_burtoni
ENSTRUG00000015417	crnkl1	90	79.381	ENSHGLG00000010856	CRNKL1	98	80.000	Heterocephalus_glaber_female
ENSTRUG00000015417	crnkl1	90	79.381	ENSHGLG00100011521	CRNKL1	98	80.000	Heterocephalus_glaber_male
ENSTRUG00000015417	crnkl1	88	85.157	ENSHCOG00000006420	crnkl1	97	84.799	Hippocampus_comes
ENSTRUG00000015417	crnkl1	84	66.981	ENSIPUG00000000315	-	99	67.610	Ictalurus_punctatus
ENSTRUG00000015417	crnkl1	88	71.536	ENSIPUG00000006836	-	98	71.343	Ictalurus_punctatus
ENSTRUG00000015417	crnkl1	89	81.738	ENSIPUG00000006751	crnkl1	90	84.793	Ictalurus_punctatus
ENSTRUG00000015417	crnkl1	90	79.971	ENSSTOG00000014747	CRNKL1	98	80.597	Ictidomys_tridecemlineatus
ENSTRUG00000015417	crnkl1	90	77.986	ENSJJAG00000016926	Crnkl1	98	78.717	Jaculus_jaculus
ENSTRUG00000015417	crnkl1	95	81.933	ENSKMAG00000003620	crnkl1	90	81.740	Kryptolebias_marmoratus
ENSTRUG00000015417	crnkl1	89	75.115	ENSLBEG00000003543	crnkl1	90	79.601	Labrus_bergylta
ENSTRUG00000015417	crnkl1	90	81.938	ENSLACG00000001129	CRNKL1	98	82.537	Latimeria_chalumnae
ENSTRUG00000015417	crnkl1	88	84.962	ENSLOCG00000016889	crnkl1	99	81.153	Lepisosteus_oculatus
ENSTRUG00000015417	crnkl1	90	79.412	ENSLAFG00000004512	CRNKL1	98	80.775	Loxodonta_africana
ENSTRUG00000015417	crnkl1	90	79.529	ENSMFAG00000039893	CRNKL1	98	80.149	Macaca_fascicularis
ENSTRUG00000015417	crnkl1	90	79.529	ENSMMUG00000007709	CRNKL1	98	80.149	Macaca_mulatta
ENSTRUG00000015417	crnkl1	90	79.529	ENSMNEG00000037490	CRNKL1	98	80.149	Macaca_nemestrina
ENSTRUG00000015417	crnkl1	90	79.529	ENSMLEG00000034885	CRNKL1	98	80.149	Mandrillus_leucophaeus
ENSTRUG00000015417	crnkl1	93	84.203	ENSMAMG00000008757	crnkl1	99	81.417	Mastacembelus_armatus
ENSTRUG00000015417	crnkl1	99	80.713	ENSMZEG00005022345	crnkl1	94	83.404	Maylandia_zebra
ENSTRUG00000015417	crnkl1	90	80.352	ENSMGAG00000003452	CRNKL1	92	80.981	Meleagris_gallopavo
ENSTRUG00000015417	crnkl1	90	79.676	ENSMAUG00000020764	Crnkl1	97	80.299	Mesocricetus_auratus
ENSTRUG00000015417	crnkl1	90	79.676	ENSMICG00000006048	CRNKL1	98	80.448	Microcebus_murinus
ENSTRUG00000015417	crnkl1	90	72.359	ENSMOCG00000000681	-	97	72.874	Microtus_ochrogaster
ENSTRUG00000015417	crnkl1	88	60.836	ENSMOCG00000004179	-	99	59.471	Microtus_ochrogaster
ENSTRUG00000015417	crnkl1	84	86.256	ENSMMOG00000017601	crnkl1	97	86.256	Mola_mola
ENSTRUG00000015417	crnkl1	90	78.924	ENSMODG00000005961	-	97	79.529	Monodelphis_domestica
ENSTRUG00000015417	crnkl1	91	74.818	ENSMODG00000010857	-	97	75.821	Monodelphis_domestica
ENSTRUG00000015417	crnkl1	93	62.936	ENSMALG00000011211	crnkl1	88	73.182	Monopterus_albus
ENSTRUG00000015417	crnkl1	90	79.971	MGP_CAROLIEiJ_G0024394	Crnkl1	97	80.838	Mus_caroli
ENSTRUG00000015417	crnkl1	90	79.971	ENSMUSG00000001767	Crnkl1	97	80.838	Mus_musculus
ENSTRUG00000015417	crnkl1	90	79.087	MGP_PahariEiJ_G0025838	Crnkl1	97	79.940	Mus_pahari
ENSTRUG00000015417	crnkl1	90	79.971	MGP_SPRETEiJ_G0025312	Crnkl1	97	80.838	Mus_spretus
ENSTRUG00000015417	crnkl1	90	80.265	ENSMPUG00000001226	CRNKL1	98	80.896	Mustela_putorius_furo
ENSTRUG00000015417	crnkl1	89	80.148	ENSMLUG00000016513	CRNKL1	87	80.924	Myotis_lucifugus
ENSTRUG00000015417	crnkl1	90	78.324	ENSNGAG00000023097	Crnkl1	98	78.917	Nannospalax_galili
ENSTRUG00000015417	crnkl1	93	83.972	ENSNBRG00000007867	crnkl1	99	80.820	Neolamprologus_brichardi
ENSTRUG00000015417	crnkl1	90	78.306	ENSNLEG00000009862	CRNKL1	97	78.916	Nomascus_leucogenys
ENSTRUG00000015417	crnkl1	87	81.307	ENSMEUG00000012167	-	98	81.374	Notamacropus_eugenii
ENSTRUG00000015417	crnkl1	90	76.029	ENSMEUG00000002361	-	97	76.304	Notamacropus_eugenii
ENSTRUG00000015417	crnkl1	67	54.688	ENSOPRG00000009242	-	61	54.475	Ochotona_princeps
ENSTRUG00000015417	crnkl1	90	79.381	ENSODEG00000012175	CRNKL1	98	80.000	Octodon_degus
ENSTRUG00000015417	crnkl1	93	83.830	ENSONIG00000018728	crnkl1	93	83.404	Oreochromis_niloticus
ENSTRUG00000015417	crnkl1	89	79.438	ENSOCUG00000015484	CRNKL1	81	80.804	Oryctolagus_cuniculus
ENSTRUG00000015417	crnkl1	94	83.453	ENSORLG00000017240	crnkl1	89	87.443	Oryzias_latipes
ENSTRUG00000015417	crnkl1	91	84.694	ENSORLG00020001742	crnkl1	90	85.693	Oryzias_latipes_hni
ENSTRUG00000015417	crnkl1	94	81.894	ENSORLG00015019564	crnkl1	90	85.544	Oryzias_latipes_hsok
ENSTRUG00000015417	crnkl1	94	83.333	ENSOMEG00000019895	crnkl1	90	87.183	Oryzias_melastigma
ENSTRUG00000015417	crnkl1	91	79.416	ENSOGAG00000011544	CRNKL1	98	80.597	Otolemur_garnettii
ENSTRUG00000015417	crnkl1	91	79.270	ENSOARG00000002150	CRNKL1	90	78.107	Ovis_aries
ENSTRUG00000015417	crnkl1	89	79.464	ENSPPAG00000027847	CRNKL1	81	80.240	Pan_paniscus
ENSTRUG00000015417	crnkl1	90	80.412	ENSPPRG00000001955	CRNKL1	98	81.045	Panthera_pardus
ENSTRUG00000015417	crnkl1	90	80.412	ENSPTIG00000007393	CRNKL1	98	81.045	Panthera_tigris_altaica
ENSTRUG00000015417	crnkl1	90	79.529	ENSPTRG00000030609	CRNKL1	98	80.149	Pan_troglodytes
ENSTRUG00000015417	crnkl1	90	79.529	ENSPANG00000017420	CRNKL1	98	80.149	Papio_anubis
ENSTRUG00000015417	crnkl1	96	76.119	ENSPKIG00000017093	crnkl1	99	74.967	Paramormyrops_kingsleyae
ENSTRUG00000015417	crnkl1	90	80.650	ENSPSIG00000012705	CRNKL1	97	81.287	Pelodiscus_sinensis
ENSTRUG00000015417	crnkl1	98	79.692	ENSPMGG00000006263	crnkl1	97	82.396	Periophthalmus_magnuspinnatus
ENSTRUG00000015417	crnkl1	90	79.971	ENSPEMG00000000073	-	97	80.597	Peromyscus_maniculatus_bairdii
ENSTRUG00000015417	crnkl1	90	77.696	ENSPMAG00000002250	crnkl1	97	77.976	Petromyzon_marinus
ENSTRUG00000015417	crnkl1	90	81.001	ENSPCIG00000025825	CRNKL1	97	79.294	Phascolarctos_cinereus
ENSTRUG00000015417	crnkl1	89	85.246	ENSPFOG00000005102	crnkl1	91	85.097	Poecilia_formosa
ENSTRUG00000015417	crnkl1	89	85.246	ENSPLAG00000007288	crnkl1	87	85.097	Poecilia_latipinna
ENSTRUG00000015417	crnkl1	89	85.395	ENSPMEG00000008865	crnkl1	91	85.246	Poecilia_mexicana
ENSTRUG00000015417	crnkl1	88	87.211	ENSPREG00000012615	crnkl1	90	86.830	Poecilia_reticulata
ENSTRUG00000015417	crnkl1	89	79.377	ENSPPYG00000010747	CRNKL1	79	80.149	Pongo_abelii
ENSTRUG00000015417	crnkl1	89	75.599	ENSPCAG00000003296	CRNKL1	83	75.821	Procavia_capensis
ENSTRUG00000015417	crnkl1	89	79.377	ENSPCOG00000017608	CRNKL1	81	80.299	Propithecus_coquereli
ENSTRUG00000015417	crnkl1	89	79.970	ENSPVAG00000006207	CRNKL1	81	80.896	Pteropus_vampyrus
ENSTRUG00000015417	crnkl1	93	83.688	ENSPNYG00000001977	crnkl1	99	80.053	Pundamilia_nyererei
ENSTRUG00000015417	crnkl1	94	83.121	ENSPNAG00000001507	crnkl1	96	83.533	Pygocentrus_nattereri
ENSTRUG00000015417	crnkl1	90	79.971	ENSRNOG00000010587	Crnkl1	97	80.838	Rattus_norvegicus
ENSTRUG00000015417	crnkl1	90	79.823	ENSRNOG00000040045	Crnkl1	97	80.689	Rattus_norvegicus
ENSTRUG00000015417	crnkl1	90	79.529	ENSRBIG00000031770	CRNKL1	98	80.149	Rhinopithecus_bieti
ENSTRUG00000015417	crnkl1	90	79.381	ENSRROG00000040450	CRNKL1	98	80.000	Rhinopithecus_roxellana
ENSTRUG00000015417	crnkl1	86	34.203	YLR117C	CLF1	99	34.203	Saccharomyces_cerevisiae
ENSTRUG00000015417	crnkl1	91	79.502	ENSSBOG00000029672	CRNKL1	98	80.448	Saimiri_boliviensis_boliviensis
ENSTRUG00000015417	crnkl1	87	64.848	ENSSHAG00000011199	CRNKL1	99	64.848	Sarcophilus_harrisii
ENSTRUG00000015417	crnkl1	88	84.766	ENSSFOG00015000946	crnkl1	87	84.858	Scleropages_formosus
ENSTRUG00000015417	crnkl1	91	83.768	ENSSMAG00000007933	crnkl1	87	85.119	Scophthalmus_maximus
ENSTRUG00000015417	crnkl1	93	76.346	ENSSDUG00000012625	crnkl1	92	75.104	Seriola_dumerili
ENSTRUG00000015417	crnkl1	98	80.965	ENSSLDG00000021413	crnkl1	99	79.423	Seriola_lalandi_dorsalis
ENSTRUG00000015417	crnkl1	90	79.823	ENSSARG00000006443	CRNKL1	80	80.448	Sorex_araneus
ENSTRUG00000015417	crnkl1	90	80.441	ENSSPUG00000005254	CRNKL1	97	81.559	Sphenodon_punctatus
ENSTRUG00000015417	crnkl1	92	85.057	ENSSPAG00000016150	crnkl1	90	83.857	Stegastes_partitus
ENSTRUG00000015417	crnkl1	91	79.738	ENSSSCG00000038587	CRNKL1	97	81.045	Sus_scrofa
ENSTRUG00000015417	crnkl1	90	80.352	ENSTGUG00000007645	CRNKL1	98	78.805	Taeniopygia_guttata
ENSTRUG00000015417	crnkl1	89	91.194	ENSTNIG00000010710	crnkl1	97	90.936	Tetraodon_nigroviridis
ENSTRUG00000015417	crnkl1	83	78.560	ENSTBEG00000001304	CRNKL1	82	78.730	Tupaia_belangeri
ENSTRUG00000015417	crnkl1	83	77.280	ENSTTRG00000000484	CRNKL1	81	77.460	Tursiops_truncatus
ENSTRUG00000015417	crnkl1	90	80.412	ENSUAMG00000018586	CRNKL1	98	81.045	Ursus_americanus
ENSTRUG00000015417	crnkl1	90	80.412	ENSUMAG00000024957	CRNKL1	98	81.045	Ursus_maritimus
ENSTRUG00000015417	crnkl1	89	80.267	ENSVVUG00000012559	CRNKL1	80	81.045	Vulpes_vulpes
ENSTRUG00000015417	crnkl1	91	80.378	ENSXETG00000009698	crnkl1	98	81.696	Xenopus_tropicalis
ENSTRUG00000015417	crnkl1	89	85.268	ENSXCOG00000000824	crnkl1	95	82.203	Xiphophorus_couchianus
ENSTRUG00000015417	crnkl1	89	85.544	ENSXMAG00000006896	crnkl1	90	85.395	Xiphophorus_maculatus