EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTRUG00000015590 (Gene tree)
Gene ID
101071574
Gene Symbol
rab5c
Alias
wu:fb98b08|wu:fi16g01
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Takifugu_rubripes
Status
putative
Strand
Plus strand
Length
6565 bases
Position
chr5:9967185-9973749
Accession
101071574
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTRUP00000039854MMR_HSR1PF01926.230.000111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTRUT00000039995-2055XM_003964798ENSTRUP00000039854220 (aa)XP_003964847H2USD1
Gene Model
Click here to download ENSTRUG00000015590's gene model file
Pathways
Pathway IDPathway NameSource
tru04144EndocytosisKEGG
tru04145PhagosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000015590's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTRUG00000015590rab5c8642.857ENSTRUG00000011399-8742.857
ENSTRUG00000015590rab5c7533.133ENSTRUG00000023449kras9032.164
ENSTRUG00000015590rab5c7339.157ENSTRUG00000020335rab33a7237.097
ENSTRUG00000015590rab5c7348.447ENSTRUG00000022029rab11bb7448.447
ENSTRUG00000015590rab5c5530.400ENSTRUG00000024749-8330.400
ENSTRUG00000015590rab5c7134.375ENSTRUG00000014481rab34b6534.375
ENSTRUG00000015590rab5c7644.910ENSTRUG00000023252rab6a8044.910
ENSTRUG00000015590rab5c9141.791ENSTRUG00000004984rab18a8044.848
ENSTRUG00000015590rab5c9884.259ENSTRUG00000024368rab5aa9982.870
ENSTRUG00000015590rab5c7437.195ENSTRUG00000025018rab39bb7737.195
ENSTRUG00000015590rab5c7630.178ENSTRUG00000017384rras28330.178
ENSTRUG00000015590rab5c7033.117ENSTRUG00000004902rheb8333.117
ENSTRUG00000015590rab5c8339.286ENSTRUG00000007036rab33ba7539.444
ENSTRUG00000015590rab5c7730.636ENSTRUG00000023011rerg8430.769
ENSTRUG00000015590rab5c7637.791ENSTRUG00000024455rab127137.791
ENSTRUG00000015590rab5c7036.774ENSTRUG00000012454rabl26836.774
ENSTRUG00000015590rab5c8042.938ENSTRUG00000009223rab418442.938
ENSTRUG00000015590rab5c7539.080ENSTRUG00000009903zgc:1015597339.080
ENSTRUG00000015590rab5c5930.303ENSTRUG00000005937rab34a5930.303
ENSTRUG00000015590rab5c7733.728ENSTRUG00000013749ran7733.728
ENSTRUG00000015590rab5c7336.310ENSTRUG00000008698rab9a8136.310
ENSTRUG00000015590rab5c7843.182ENSTRUG00000020093-9939.320
ENSTRUG00000015590rab5c9339.320ENSTRUG00000004881rab6bb8442.857
ENSTRUG00000015590rab5c8142.541ENSTRUG00000003363rab2a8044.737
ENSTRUG00000015590rab5c7430.061ENSTRUG00000020012rhebl18830.061
ENSTRUG00000015590rab5c5831.061ENSTRUG00000011496arl8bb6631.061
ENSTRUG00000015590rab5c9540.367ENSTRUG00000021619-7547.826
ENSTRUG00000015590rab5c8936.410ENSTRUG00000020633rab35b7942.138
ENSTRUG00000015590rab5c7149.682ENSTRUG00000007556rab11al9051.079
ENSTRUG00000015590rab5c7942.697ENSTRUG00000010082RAB7A8642.697
ENSTRUG00000015590rab5c8949.490ENSTRUG00000018380rab22a8454.601
ENSTRUG00000015590rab5c6735.135ENSTRUG00000015697rab237436.184
ENSTRUG00000015590rab5c5830.303ENSTRUG00000023169arl8ba6630.303
ENSTRUG00000015590rab5c8046.286ENSTRUG00000023164rab1ab8147.853
ENSTRUG00000015590rab5c8942.157ENSTRUG00000020792rab11a7548.447
ENSTRUG00000015590rab5c7945.763ENSTRUG00000007504rab25b8146.746
ENSTRUG00000015590rab5c5530.400ENSTRUG00000020509-6030.400
ENSTRUG00000015590rab5c7833.708ENSTRUG00000024825hrasb8732.335
ENSTRUG00000015590rab5c8943.077ENSTRUG00000004287rab1ba8147.239
ENSTRUG00000015590rab5c7543.636ENSTRUG00000004283rab18b8043.636
ENSTRUG00000015590rab5c8944.554ENSTRUG00000014595-7949.091
ENSTRUG00000015590rab5c5831.061ENSTRUG00000013912arl8a6631.061
ENSTRUG00000015590rab5c7133.125ENSTRUG00000010393-6233.125
ENSTRUG00000015590rab5c7437.195ENSTRUG00000010224rab42a7537.195
ENSTRUG00000015590rab5c7841.040ENSTRUG00000024177rab137943.038
ENSTRUG00000015590rab5c7339.752ENSTRUG00000017824rab159335.176
ENSTRUG00000015590rab5c8943.077ENSTRUG00000024994RAB1A8147.239
ENSTRUG00000015590rab5c8833.166ENSTRUG00000013963RAB9A9633.166
ENSTRUG00000015590rab5c7639.881ENSTRUG00000025076si:dkey-16l2.169636.816
ENSTRUG00000015590rab5c7237.736ENSTRUG00000014783RAB157537.736
ENSTRUG00000015590rab5c7644.910ENSTRUG00000022559rab308244.910
ENSTRUG00000015590rab5c7348.447ENSTRUG00000021614-7448.447
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTRUG00000015590rab5c9890.278ENSG00000108774RAB5C10094.355Homo_sapiens
ENSTRUG00000015590rab5c10095.000ENSAPOG00000016864rab5c10095.000Acanthochromis_polyacanthus
ENSTRUG00000015590rab5c9889.815ENSAMEG00000006003RAB5C9987.963Ailuropoda_melanoleuca
ENSTRUG00000015590rab5c10095.000ENSACIG00000010896rab5c10095.000Amphilophus_citrinellus
ENSTRUG00000015590rab5c10095.000ENSAOCG00000016614rab5c10095.000Amphiprion_ocellaris
ENSTRUG00000015590rab5c9894.444ENSAPEG00000017868-9994.884Amphiprion_percula
ENSTRUG00000015590rab5c9996.774ENSATEG00000001937rab5c9996.774Anabas_testudineus
ENSTRUG00000015590rab5c9392.195ENSANAG00000025390RAB5C10089.756Aotus_nancymaae
ENSTRUG00000015590rab5c10094.091ENSACLG00000002706rab5c10094.091Astatotilapia_calliptera
ENSTRUG00000015590rab5c9688.679ENSACLG00000008615-10087.387Astatotilapia_calliptera
ENSTRUG00000015590rab5c10095.475ENSAMXG00000043717rab5c10095.475Astyanax_mexicanus
ENSTRUG00000015590rab5c9591.346ENSAMXG00000037267-9991.346Astyanax_mexicanus
ENSTRUG00000015590rab5c9889.815ENSBTAG00000006982RAB5C9987.500Bos_taurus
ENSTRUG00000015590rab5c9875.576WBGene00004268rab-59975.576Caenorhabditis_elegans
ENSTRUG00000015590rab5c9889.815ENSCAFG00000015629RAB5C9987.963Canis_familiaris
ENSTRUG00000015590rab5c9889.815ENSCAFG00020013537RAB5C9987.963Canis_lupus_dingo
ENSTRUG00000015590rab5c9889.815ENSCHIG00000012960RAB5C9987.500Capra_hircus
ENSTRUG00000015590rab5c9890.278ENSTSYG00000030531RAB5C9987.963Carlito_syrichta
ENSTRUG00000015590rab5c9890.278ENSCCAG00000025940RAB5C9987.963Cebus_capucinus
ENSTRUG00000015590rab5c9890.278ENSCATG00000040873RAB5C9987.963Cercocebus_atys
ENSTRUG00000015590rab5c9890.278ENSCLAG00000016650RAB5C9987.963Chinchilla_lanigera
ENSTRUG00000015590rab5c8193.820ENSCHOG00000009886RAB5C10093.820Choloepus_hoffmanni
ENSTRUG00000015590rab5c9975.688ENSCING00000003340-9974.886Ciona_intestinalis
ENSTRUG00000015590rab5c9976.106ENSCSAVG00000000613-9984.568Ciona_savignyi
ENSTRUG00000015590rab5c9890.278ENSCGRG00001014226Rab5c9987.963Cricetulus_griseus_chok1gshd
ENSTRUG00000015590rab5c9890.278ENSCGRG00000007534Rab5c9987.963Cricetulus_griseus_crigri
ENSTRUG00000015590rab5c10094.091ENSCSEG00000017024rab5c10094.091Cynoglossus_semilaevis
ENSTRUG00000015590rab5c10094.545ENSCVAG00000009550rab5c10094.545Cyprinodon_variegatus
ENSTRUG00000015590rab5c9890.741ENSDNOG00000038853RAB5C9988.426Dasypus_novemcinctus
ENSTRUG00000015590rab5c9891.204ENSDORG00000006819Rab5c9988.889Dipodomys_ordii
ENSTRUG00000015590rab5c9076.768FBgn0014010Rab58480.541Drosophila_melanogaster
ENSTRUG00000015590rab5c8586.022ENSEBUG00000014794rab5c8886.022Eptatretus_burgeri
ENSTRUG00000015590rab5c9889.815ENSEASG00005009281RAB5C9987.963Equus_asinus_asinus
ENSTRUG00000015590rab5c9890.278ENSECAG00000025054RAB5C9987.963Equus_caballus
ENSTRUG00000015590rab5c9889.815ENSEEUG00000002790RAB5C9987.500Erinaceus_europaeus
ENSTRUG00000015590rab5c10090.000ENSELUG00000010439-10090.000Esox_lucius
ENSTRUG00000015590rab5c9893.981ENSELUG00000018516rab5c9993.981Esox_lucius
ENSTRUG00000015590rab5c9889.815ENSFCAG00000002148RAB5C9987.500Felis_catus
ENSTRUG00000015590rab5c9888.889ENSFDAG00000021541RAB5C9987.037Fukomys_damarensis
ENSTRUG00000015590rab5c10095.909ENSFHEG00000012117rab5c10095.909Fundulus_heteroclitus
ENSTRUG00000015590rab5c9989.954ENSFHEG00000015268-9989.954Fundulus_heteroclitus
ENSTRUG00000015590rab5c10095.000ENSGMOG00000015096rab5c10095.000Gadus_morhua
ENSTRUG00000015590rab5c7688.690ENSGMOG00000001876-9788.690Gadus_morhua
ENSTRUG00000015590rab5c9590.431ENSGAFG00000003642-9988.288Gambusia_affinis
ENSTRUG00000015590rab5c10095.000ENSGAFG00000000884rab5c10095.000Gambusia_affinis
ENSTRUG00000015590rab5c10091.364ENSGACG00000008659rab5c10091.364Gasterosteus_aculeatus
ENSTRUG00000015590rab5c9890.278ENSGGOG00000005472RAB5C9987.963Gorilla_gorilla
ENSTRUG00000015590rab5c10094.091ENSHBUG00000002014rab5c10094.091Haplochromis_burtoni
ENSTRUG00000015590rab5c9688.679ENSHBUG00000006823-10087.387Haplochromis_burtoni
ENSTRUG00000015590rab5c9889.815ENSHGLG00000012067RAB5C9987.963Heterocephalus_glaber_female
ENSTRUG00000015590rab5c9581.429ENSHCOG00000020238-10079.386Hippocampus_comes
ENSTRUG00000015590rab5c10095.023ENSHCOG00000004662rab5c9895.890Hippocampus_comes
ENSTRUG00000015590rab5c9593.780ENSIPUG00000020082rab5c10094.595Ictalurus_punctatus
ENSTRUG00000015590rab5c9889.352ENSSTOG00000006620RAB5C9987.500Ictidomys_tridecemlineatus
ENSTRUG00000015590rab5c9890.278ENSJJAG00000021181Rab5c9987.963Jaculus_jaculus
ENSTRUG00000015590rab5c9990.411ENSKMAG00000017417-9990.411Kryptolebias_marmoratus
ENSTRUG00000015590rab5c10096.364ENSKMAG00000020038rab5c10096.364Kryptolebias_marmoratus
ENSTRUG00000015590rab5c10095.909ENSLBEG00000004128rab5c10095.909Labrus_bergylta
ENSTRUG00000015590rab5c10090.950ENSLBEG00000010408-10090.950Labrus_bergylta
ENSTRUG00000015590rab5c9891.667ENSLOCG00000012566rab5c10089.815Lepisosteus_oculatus
ENSTRUG00000015590rab5c9890.278ENSMFAG00000039627RAB5C9987.963Macaca_fascicularis
ENSTRUG00000015590rab5c9890.278ENSMNEG00000000355RAB5C9987.963Macaca_nemestrina
ENSTRUG00000015590rab5c10095.455ENSMAMG00000022322rab5c10095.455Mastacembelus_armatus
ENSTRUG00000015590rab5c9990.411ENSMAMG00000016207-9990.411Mastacembelus_armatus
ENSTRUG00000015590rab5c10094.091ENSMZEG00005022735rab5c10094.091Maylandia_zebra
ENSTRUG00000015590rab5c9688.679ENSMZEG00005021090-10087.387Maylandia_zebra
ENSTRUG00000015590rab5c9890.278ENSMAUG00000015005Rab5c9987.963Mesocricetus_auratus
ENSTRUG00000015590rab5c9890.278ENSMICG00000041608RAB5C9987.963Microcebus_murinus
ENSTRUG00000015590rab5c9890.278ENSMOCG00000018531-9987.963Microtus_ochrogaster
ENSTRUG00000015590rab5c10095.455ENSMMOG00000020621rab5c10095.455Mola_mola
ENSTRUG00000015590rab5c9889.302ENSMALG00000006052rab5c9789.302Monopterus_albus
ENSTRUG00000015590rab5c9988.128ENSMALG00000022348-9988.128Monopterus_albus
ENSTRUG00000015590rab5c9890.278MGP_CAROLIEiJ_G0017184Rab5c9987.963Mus_caroli
ENSTRUG00000015590rab5c9890.278ENSMUSG00000019173Rab5c9987.963Mus_musculus
ENSTRUG00000015590rab5c9890.278MGP_PahariEiJ_G0018314Rab5c9987.963Mus_pahari
ENSTRUG00000015590rab5c9890.278MGP_SPRETEiJ_G0018027Rab5c9987.963Mus_spretus
ENSTRUG00000015590rab5c9889.815ENSMPUG00000010554RAB5C9987.963Mustela_putorius_furo
ENSTRUG00000015590rab5c9890.741ENSNGAG00000010286Rab5c9988.426Nannospalax_galili
ENSTRUG00000015590rab5c10095.000ENSNBRG00000018165rab5c10095.000Neolamprologus_brichardi
ENSTRUG00000015590rab5c9688.679ENSNBRG00000016922-10087.387Neolamprologus_brichardi
ENSTRUG00000015590rab5c8187.079ENSOPRG00000008255RAB5C10087.079Ochotona_princeps
ENSTRUG00000015590rab5c9890.278ENSODEG00000017920RAB5C9987.963Octodon_degus
ENSTRUG00000015590rab5c10095.000ENSONIG00000001113rab5c10095.000Oreochromis_niloticus
ENSTRUG00000015590rab5c9995.392ENSORLG00000003882rab5c9995.392Oryzias_latipes
ENSTRUG00000015590rab5c9994.931ENSORLG00020008388rab5c9994.931Oryzias_latipes_hni
ENSTRUG00000015590rab5c9995.392ENSORLG00015021900rab5c9995.392Oryzias_latipes_hsok
ENSTRUG00000015590rab5c9995.392ENSOMEG00000023078rab5c9995.392Oryzias_melastigma
ENSTRUG00000015590rab5c9890.741ENSOGAG00000009456RAB5C9988.426Otolemur_garnettii
ENSTRUG00000015590rab5c9889.815ENSOARG00000018768RAB5C9987.500Ovis_aries
ENSTRUG00000015590rab5c9890.278ENSPPAG00000037206RAB5C9987.963Pan_paniscus
ENSTRUG00000015590rab5c9889.815ENSPPRG00000005745RAB5C9987.500Panthera_pardus
ENSTRUG00000015590rab5c9889.815ENSPTIG00000008177RAB5C9987.500Panthera_tigris_altaica
ENSTRUG00000015590rab5c9890.278ENSPTRG00000009194RAB5C9987.963Pan_troglodytes
ENSTRUG00000015590rab5c9886.574ENSPKIG00000020112-9986.574Paramormyrops_kingsleyae
ENSTRUG00000015590rab5c9888.426ENSPKIG00000001237-9986.574Paramormyrops_kingsleyae
ENSTRUG00000015590rab5c10092.273ENSPMGG00000010792rab5c9993.953Periophthalmus_magnuspinnatus
ENSTRUG00000015590rab5c9890.278ENSPEMG00000017971Rab5c9987.963Peromyscus_maniculatus_bairdii
ENSTRUG00000015590rab5c8781.250ENSPMAG00000007867rab5c8982.447Petromyzon_marinus
ENSTRUG00000015590rab5c9976.037ENSPMAG00000001399rab5c10075.576Petromyzon_marinus
ENSTRUG00000015590rab5c9878.281ENSPMAG00000000008rab5c8885.938Petromyzon_marinus
ENSTRUG00000015590rab5c9890.278ENSPCIG00000020225-9987.963Phascolarctos_cinereus
ENSTRUG00000015590rab5c9989.041ENSPLAG00000016333-10089.041Poecilia_latipinna
ENSTRUG00000015590rab5c10095.000ENSPLAG00000004790rab5c10095.000Poecilia_latipinna
ENSTRUG00000015590rab5c9690.094ENSPMEG00000012614-10088.341Poecilia_mexicana
ENSTRUG00000015590rab5c10095.000ENSPMEG00000011336rab5c10095.000Poecilia_mexicana
ENSTRUG00000015590rab5c10095.000ENSPREG00000010146rab5c10095.000Poecilia_reticulata
ENSTRUG00000015590rab5c8590.476ENSPREG00000022167-8991.803Poecilia_reticulata
ENSTRUG00000015590rab5c9890.278ENSPPYG00000008398RAB5C9987.963Pongo_abelii
ENSTRUG00000015590rab5c9889.352ENSPCAG00000016412RAB5C9987.037Procavia_capensis
ENSTRUG00000015590rab5c9889.815ENSPCOG00000026327RAB5C9987.963Propithecus_coquereli
ENSTRUG00000015590rab5c9890.278ENSPVAG00000003867RAB5C9987.963Pteropus_vampyrus
ENSTRUG00000015590rab5c9688.679ENSPNYG00000015851-10087.387Pundamilia_nyererei
ENSTRUG00000015590rab5c10094.091ENSPNYG00000010615rab5c10094.091Pundamilia_nyererei
ENSTRUG00000015590rab5c10095.023ENSPNAG00000028138rab5c10095.023Pygocentrus_nattereri
ENSTRUG00000015590rab5c9589.474ENSPNAG00000002218-9889.474Pygocentrus_nattereri
ENSTRUG00000015590rab5c9890.278ENSRNOG00000018568Rab5c9987.963Rattus_norvegicus
ENSTRUG00000015590rab5c9890.278ENSRBIG00000031376RAB5C9987.963Rhinopithecus_bieti
ENSTRUG00000015590rab5c9890.278ENSRROG00000032895RAB5C9987.963Rhinopithecus_roxellana
ENSTRUG00000015590rab5c9890.278ENSSBOG00000032552-9987.963Saimiri_boliviensis_boliviensis
ENSTRUG00000015590rab5c9890.741ENSSHAG00000005267-9988.426Sarcophilus_harrisii
ENSTRUG00000015590rab5c10086.364ENSSFOG00015009988-10086.364Scleropages_formosus
ENSTRUG00000015590rab5c9595.694ENSSMAG00000007323rab5c10094.091Scophthalmus_maximus
ENSTRUG00000015590rab5c10095.000ENSSDUG00000023008rab5c10095.000Seriola_dumerili
ENSTRUG00000015590rab5c10094.091ENSSLDG00000017771rab5c10094.091Seriola_lalandi_dorsalis
ENSTRUG00000015590rab5c9889.815ENSSPUG00000012950-9987.963Sphenodon_punctatus
ENSTRUG00000015590rab5c10096.364ENSSPAG00000006436rab5c10096.364Stegastes_partitus
ENSTRUG00000015590rab5c9889.815ENSSSCG00000032467RAB5C9987.500Sus_scrofa
ENSTRUG00000015590rab5c9597.619ENSTNIG00000011711rab5c9597.619Tetraodon_nigroviridis
ENSTRUG00000015590rab5c9890.278ENSTBEG00000007092RAB5C9987.963Tupaia_belangeri
ENSTRUG00000015590rab5c9889.352ENSTTRG00000006673RAB5C9987.500Tursiops_truncatus
ENSTRUG00000015590rab5c9889.815ENSUAMG00000024343RAB5C9987.963Ursus_americanus
ENSTRUG00000015590rab5c9889.815ENSUMAG00000023270RAB5C9987.963Ursus_maritimus
ENSTRUG00000015590rab5c9590.431ENSXCOG00000006300-9988.288Xiphophorus_couchianus
ENSTRUG00000015590rab5c10095.000ENSXCOG00000016788rab5c10095.000Xiphophorus_couchianus
ENSTRUG00000015590rab5c9988.584ENSXMAG00000022179-10088.584Xiphophorus_maculatus
ENSTRUG00000015590rab5c10095.000ENSXMAG00000003266rab5c10095.000Xiphophorus_maculatus

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