EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000015619 (Gene tree)
Gene ID: 101063536
Gene Symbol: SMARCA2
Alias: wu:fa56c07|wu:fi27f11|zgc:66238
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 23924 bases
Position: chr21:12000396-12024319
Accession: 101063536
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000039930	BRK	PF07533.16	1.1e-17	1	1
ENSTRUP00000039929	BRK	PF07533.16	1.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000040070	SMARCA2-201	8243	XM_011615939	ENSTRUP00000039929	1575 (aa)	XP_011614241	H2USK6
ENSTRUT00000040071	SMARCA2-202	4539	-	ENSTRUP00000039930	1512 (aa)	-	H2USK7

Gene Model

Click here to download ENSTRUG00000015619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000015619's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000015619	SMARCA2	93	69.381	ENSTRUG00000001378	SMARCA4	98	69.707
ENSTRUG00000015619	SMARCA2	87	70.730	ENSTRUG00000004885	smarca4a	100	71.389

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000015619	SMARCA2	97	79.949	ENSG00000080503	SMARCA2	97	95.238	Homo_sapiens
ENSTRUG00000015619	SMARCA2	99	90.032	ENSAPOG00000002641	SMARCA2	100	89.027	Acanthochromis_polyacanthus
ENSTRUG00000015619	SMARCA2	88	76.204	ENSAMEG00000012325	SMARCA2	98	85.760	Ailuropoda_melanoleuca
ENSTRUG00000015619	SMARCA2	100	86.946	ENSACIG00000015607	SMARCA2	99	87.258	Amphilophus_citrinellus
ENSTRUG00000015619	SMARCA2	99	90.032	ENSAOCG00000009647	-	99	89.660	Amphiprion_ocellaris
ENSTRUG00000015619	SMARCA2	99	89.968	ENSAPEG00000007646	SMARCA2	99	89.723	Amphiprion_percula
ENSTRUG00000015619	SMARCA2	99	90.747	ENSATEG00000006916	SMARCA2	98	90.689	Anabas_testudineus
ENSTRUG00000015619	SMARCA2	87	77.354	ENSAPLG00000013873	SMARCA2	93	77.141	Anas_platyrhynchos
ENSTRUG00000015619	SMARCA2	95	79.051	ENSACAG00000002423	SMARCA2	99	78.436	Anolis_carolinensis
ENSTRUG00000015619	SMARCA2	97	78.920	ENSANAG00000026498	SMARCA2	99	79.646	Aotus_nancymaae
ENSTRUG00000015619	SMARCA2	99	88.378	ENSACLG00000004248	SMARCA2	99	88.343	Astatotilapia_calliptera
ENSTRUG00000015619	SMARCA2	99	83.955	ENSAMXG00000012404	smarca2	99	83.912	Astyanax_mexicanus
ENSTRUG00000015619	SMARCA2	97	79.923	ENSBTAG00000007494	SMARCA2	99	79.685	Bos_taurus
ENSTRUG00000015619	SMARCA2	97	80.078	ENSCJAG00000010710	SMARCA2	99	79.924	Callithrix_jacchus
ENSTRUG00000015619	SMARCA2	97	79.782	ENSCAFG00000002013	SMARCA2	99	79.202	Canis_familiaris
ENSTRUG00000015619	SMARCA2	74	86.114	ENSCAFG00020026802	SMARCA2	94	87.002	Canis_lupus_dingo
ENSTRUG00000015619	SMARCA2	97	80.218	ENSCHIG00000025863	SMARCA2	99	79.748	Capra_hircus
ENSTRUG00000015619	SMARCA2	97	77.185	ENSTSYG00000003858	SMARCA2	99	79.547	Carlito_syrichta
ENSTRUG00000015619	SMARCA2	97	78.350	ENSCAPG00000002890	SMARCA2	99	78.067	Cavia_aperea
ENSTRUG00000015619	SMARCA2	97	79.028	ENSCPOG00000005475	SMARCA2	99	79.393	Cavia_porcellus
ENSTRUG00000015619	SMARCA2	97	79.268	ENSCCAG00000030636	SMARCA2	99	79.822	Cebus_capucinus
ENSTRUG00000015619	SMARCA2	97	77.945	ENSCATG00000031470	SMARCA2	99	80.203	Cercocebus_atys
ENSTRUG00000015619	SMARCA2	97	79.315	ENSCLAG00000014484	SMARCA2	99	79.583	Chinchilla_lanigera
ENSTRUG00000015619	SMARCA2	91	80.421	ENSCSAG00000008650	SMARCA2	99	80.924	Chlorocebus_sabaeus
ENSTRUG00000015619	SMARCA2	84	81.946	ENSCHOG00000004316	SMARCA2	86	81.946	Choloepus_hoffmanni
ENSTRUG00000015619	SMARCA2	96	79.779	ENSCPBG00000025463	SMARCA2	98	82.687	Chrysemys_picta_bellii
ENSTRUG00000015619	SMARCA2	97	79.313	ENSCANG00000039597	SMARCA2	99	80.559	Colobus_angolensis_palliatus
ENSTRUG00000015619	SMARCA2	97	73.107	ENSCGRG00001002323	Smarca2	99	74.210	Cricetulus_griseus_chok1gshd
ENSTRUG00000015619	SMARCA2	99	86.142	ENSCSEG00000019311	SMARCA2	99	86.142	Cynoglossus_semilaevis
ENSTRUG00000015619	SMARCA2	85	86.289	ENSCVAG00000016571	SMARCA2	98	86.130	Cyprinodon_variegatus
ENSTRUG00000015619	SMARCA2	100	82.696	ENSDARG00000008904	smarca2	99	82.487	Danio_rerio
ENSTRUG00000015619	SMARCA2	97	79.987	ENSDNOG00000006402	SMARCA2	99	79.635	Dasypus_novemcinctus
ENSTRUG00000015619	SMARCA2	97	78.971	ENSDORG00000014832	Smarca2	99	79.596	Dipodomys_ordii
ENSTRUG00000015619	SMARCA2	76	62.914	FBgn0000212	brm	83	57.329	Drosophila_melanogaster
ENSTRUG00000015619	SMARCA2	89	59.564	ENSEBUG00000002449	-	94	62.274	Eptatretus_burgeri
ENSTRUG00000015619	SMARCA2	95	68.652	ENSEBUG00000011442	-	97	68.121	Eptatretus_burgeri
ENSTRUG00000015619	SMARCA2	97	79.679	ENSEASG00005010312	SMARCA2	99	79.445	Equus_asinus_asinus
ENSTRUG00000015619	SMARCA2	61	94.118	ENSEEUG00000015540	-	69	77.027	Erinaceus_europaeus
ENSTRUG00000015619	SMARCA2	95	83.001	ENSELUG00000010318	smarca2	99	79.721	Esox_lucius
ENSTRUG00000015619	SMARCA2	96	80.182	ENSFCAG00000001568	SMARCA2	99	79.204	Felis_catus
ENSTRUG00000015619	SMARCA2	95	80.026	ENSFALG00000010416	SMARCA2	99	80.342	Ficedula_albicollis
ENSTRUG00000015619	SMARCA2	97	79.212	ENSFDAG00000010502	SMARCA2	99	78.737	Fukomys_damarensis
ENSTRUG00000015619	SMARCA2	99	89.607	ENSFHEG00000021250	SMARCA2	100	89.819	Fundulus_heteroclitus
ENSTRUG00000015619	SMARCA2	99	81.112	ENSGMOG00000014229	SMARCA2	99	80.682	Gadus_morhua
ENSTRUG00000015619	SMARCA2	96	79.622	ENSGALG00000010164	SMARCA2	99	79.861	Gallus_gallus
ENSTRUG00000015619	SMARCA2	95	81.395	ENSGAFG00000001164	SMARCA2	95	81.399	Gambusia_affinis
ENSTRUG00000015619	SMARCA2	99	88.079	ENSGACG00000014488	SMARCA2	99	86.859	Gasterosteus_aculeatus
ENSTRUG00000015619	SMARCA2	96	79.649	ENSGAGG00000024412	SMARCA2	99	78.927	Gopherus_agassizii
ENSTRUG00000015619	SMARCA2	97	79.197	ENSGGOG00000000513	SMARCA2	99	80.366	Gorilla_gorilla
ENSTRUG00000015619	SMARCA2	99	89.377	ENSHBUG00000006691	SMARCA2	99	89.328	Haplochromis_burtoni
ENSTRUG00000015619	SMARCA2	97	79.328	ENSHGLG00000005215	SMARCA2	98	79.619	Heterocephalus_glaber_female
ENSTRUG00000015619	SMARCA2	97	79.370	ENSHGLG00100010496	SMARCA2	99	79.140	Heterocephalus_glaber_male
ENSTRUG00000015619	SMARCA2	89	81.278	ENSHCOG00000015348	-	100	80.984	Hippocampus_comes
ENSTRUG00000015619	SMARCA2	99	82.669	ENSIPUG00000011060	smarca2	98	82.353	Ictalurus_punctatus
ENSTRUG00000015619	SMARCA2	97	79.767	ENSSTOG00000006812	SMARCA2	99	79.987	Ictidomys_tridecemlineatus
ENSTRUG00000015619	SMARCA2	97	79.085	ENSJJAG00000010867	Smarca2	99	79.193	Jaculus_jaculus
ENSTRUG00000015619	SMARCA2	99	89.241	ENSKMAG00000015844	-	100	88.896	Kryptolebias_marmoratus
ENSTRUG00000015619	SMARCA2	96	81.150	ENSLOCG00000011499	smarca2	99	80.707	Lepisosteus_oculatus
ENSTRUG00000015619	SMARCA2	97	79.052	ENSLAFG00000014061	SMARCA2	99	79.482	Loxodonta_africana
ENSTRUG00000015619	SMARCA2	97	76.843	ENSMFAG00000003814	SMARCA2	99	79.520	Macaca_fascicularis
ENSTRUG00000015619	SMARCA2	97	79.135	ENSMMUG00000015279	SMARCA2	99	80.559	Macaca_mulatta
ENSTRUG00000015619	SMARCA2	97	78.576	ENSMNEG00000041069	SMARCA2	99	80.140	Macaca_nemestrina
ENSTRUG00000015619	SMARCA2	97	78.833	ENSMLEG00000027418	SMARCA2	99	79.225	Mandrillus_leucophaeus
ENSTRUG00000015619	SMARCA2	100	90.069	ENSMAMG00000003056	SMARCA2	99	90.006	Mastacembelus_armatus
ENSTRUG00000015619	SMARCA2	99	89.783	ENSMZEG00005020709	SMARCA2	99	89.729	Maylandia_zebra
ENSTRUG00000015619	SMARCA2	74	67.503	ENSMGAG00000005160	-	99	60.748	Meleagris_gallopavo
ENSTRUG00000015619	SMARCA2	97	79.820	ENSMICG00000005162	SMARCA2	99	79.848	Microcebus_murinus
ENSTRUG00000015619	SMARCA2	97	79.339	ENSMOCG00000001611	Smarca2	99	79.659	Microtus_ochrogaster
ENSTRUG00000015619	SMARCA2	99	87.982	ENSMMOG00000014196	SMARCA2	100	87.637	Mola_mola
ENSTRUG00000015619	SMARCA2	96	79.375	ENSMODG00000003578	SMARCA2	99	79.609	Monodelphis_domestica
ENSTRUG00000015619	SMARCA2	99	88.853	ENSMALG00000009611	SMARCA2	99	88.787	Monopterus_albus
ENSTRUG00000015619	SMARCA2	96	78.139	MGP_CAROLIEiJ_G0022841	Smarca2	99	80.101	Mus_caroli
ENSTRUG00000015619	SMARCA2	96	78.190	ENSMUSG00000024921	Smarca2	96	96.000	Mus_musculus
ENSTRUG00000015619	SMARCA2	96	79.922	MGP_PahariEiJ_G0014334	Smarca2	99	79.886	Mus_pahari
ENSTRUG00000015619	SMARCA2	96	78.255	MGP_SPRETEiJ_G0023759	Smarca2	97	88.309	Mus_spretus
ENSTRUG00000015619	SMARCA2	79	85.469	ENSMPUG00000005171	SMARCA2	93	85.794	Mustela_putorius_furo
ENSTRUG00000015619	SMARCA2	97	76.227	ENSMLUG00000002342	SMARCA2	99	75.843	Myotis_lucifugus
ENSTRUG00000015619	SMARCA2	97	78.426	ENSNGAG00000000108	Smarca2	99	77.681	Nannospalax_galili
ENSTRUG00000015619	SMARCA2	94	76.097	ENSNBRG00000017998	SMARCA2	93	93.333	Neolamprologus_brichardi
ENSTRUG00000015619	SMARCA2	91	85.206	ENSNLEG00000008575	SMARCA2	99	78.590	Nomascus_leucogenys
ENSTRUG00000015619	SMARCA2	91	74.235	ENSMEUG00000009812	SMARCA2	99	72.000	Notamacropus_eugenii
ENSTRUG00000015619	SMARCA2	97	73.961	ENSOPRG00000013474	SMARCA2	99	76.694	Ochotona_princeps
ENSTRUG00000015619	SMARCA2	97	76.977	ENSODEG00000005452	SMARCA2	98	79.621	Octodon_degus
ENSTRUG00000015619	SMARCA2	99	89.121	ENSONIG00000014163	SMARCA2	99	88.938	Oreochromis_niloticus
ENSTRUG00000015619	SMARCA2	97	79.884	ENSOCUG00000006320	SMARCA2	99	78.908	Oryctolagus_cuniculus
ENSTRUG00000015619	SMARCA2	100	88.239	ENSORLG00000020820	SMARCA2	100	87.672	Oryzias_latipes
ENSTRUG00000015619	SMARCA2	100	88.113	ENSORLG00015006289	SMARCA2	100	87.547	Oryzias_latipes_hsok
ENSTRUG00000015619	SMARCA2	99	88.179	ENSOMEG00000009736	-	99	87.445	Oryzias_melastigma
ENSTRUG00000015619	SMARCA2	97	79.038	ENSOGAG00000017053	SMARCA2	99	78.750	Otolemur_garnettii
ENSTRUG00000015619	SMARCA2	97	78.010	ENSOARG00000013265	SMARCA2	99	78.373	Ovis_aries
ENSTRUG00000015619	SMARCA2	97	79.986	ENSPPAG00000038717	SMARCA2	99	81.498	Pan_paniscus
ENSTRUG00000015619	SMARCA2	96	80.247	ENSPPRG00000001879	SMARCA2	99	79.267	Panthera_pardus
ENSTRUG00000015619	SMARCA2	97	79.666	ENSPTRG00000051168	SMARCA2	99	80.774	Pan_troglodytes
ENSTRUG00000015619	SMARCA2	97	76.252	ENSPANG00000025121	SMARCA2	99	76.791	Papio_anubis
ENSTRUG00000015619	SMARCA2	100	83.030	ENSPKIG00000018469	-	99	83.110	Paramormyrops_kingsleyae
ENSTRUG00000015619	SMARCA2	95	79.539	ENSPSIG00000006284	SMARCA2	99	78.841	Pelodiscus_sinensis
ENSTRUG00000015619	SMARCA2	99	81.540	ENSPMGG00000013696	-	99	81.403	Periophthalmus_magnuspinnatus
ENSTRUG00000015619	SMARCA2	97	77.865	ENSPEMG00000019821	Smarca2	99	78.941	Peromyscus_maniculatus_bairdii
ENSTRUG00000015619	SMARCA2	95	70.611	ENSPMAG00000005337	-	97	69.483	Petromyzon_marinus
ENSTRUG00000015619	SMARCA2	97	79.499	ENSPCIG00000015658	SMARCA2	99	79.735	Phascolarctos_cinereus
ENSTRUG00000015619	SMARCA2	99	88.628	ENSPFOG00000001856	SMARCA2	100	88.478	Poecilia_formosa
ENSTRUG00000015619	SMARCA2	99	88.250	ENSPLAG00000017829	SMARCA2	97	87.406	Poecilia_latipinna
ENSTRUG00000015619	SMARCA2	99	88.306	ENSPMEG00000001815	-	99	88.037	Poecilia_mexicana
ENSTRUG00000015619	SMARCA2	99	88.124	ENSPREG00000013800	SMARCA2	100	87.920	Poecilia_reticulata
ENSTRUG00000015619	SMARCA2	97	78.767	ENSPPYG00000019258	SMARCA2	99	79.321	Pongo_abelii
ENSTRUG00000015619	SMARCA2	76	75.352	ENSPCAG00000016969	SMARCA2	76	75.352	Procavia_capensis
ENSTRUG00000015619	SMARCA2	97	77.458	ENSPCOG00000025709	SMARCA2	99	77.539	Propithecus_coquereli
ENSTRUG00000015619	SMARCA2	90	80.784	ENSPVAG00000000901	SMARCA2	93	82.237	Pteropus_vampyrus
ENSTRUG00000015619	SMARCA2	99	85.696	ENSPNYG00000004533	SMARCA2	99	85.813	Pundamilia_nyererei
ENSTRUG00000015619	SMARCA2	99	83.692	ENSPNAG00000014635	smarca2	98	84.280	Pygocentrus_nattereri
ENSTRUG00000015619	SMARCA2	97	78.961	ENSRNOG00000011931	Smarca2	99	79.010	Rattus_norvegicus
ENSTRUG00000015619	SMARCA2	97	77.785	ENSRBIG00000038618	SMARCA2	94	86.624	Rhinopithecus_bieti
ENSTRUG00000015619	SMARCA2	97	77.862	ENSRROG00000019271	SMARCA2	99	80.140	Rhinopithecus_roxellana
ENSTRUG00000015619	SMARCA2	91	85.726	ENSSBOG00000034827	SMARCA2	99	77.686	Saimiri_boliviensis_boliviensis
ENSTRUG00000015619	SMARCA2	96	80.013	ENSSHAG00000007884	SMARCA2	99	79.280	Sarcophilus_harrisii
ENSTRUG00000015619	SMARCA2	91	82.645	ENSSFOG00015014870	SMARCA2	97	83.567	Scleropages_formosus
ENSTRUG00000015619	SMARCA2	99	88.552	ENSSMAG00000013707	SMARCA2	99	88.951	Scophthalmus_maximus
ENSTRUG00000015619	SMARCA2	99	88.925	ENSSDUG00000008852	-	99	88.957	Seriola_dumerili
ENSTRUG00000015619	SMARCA2	99	88.896	ENSSLDG00000025449	SMARCA2	99	88.853	Seriola_lalandi_dorsalis
ENSTRUG00000015619	SMARCA2	87	82.667	ENSSARG00000007888	SMARCA2	89	82.237	Sorex_araneus
ENSTRUG00000015619	SMARCA2	97	75.762	ENSSPUG00000001629	SMARCA2	97	77.224	Sphenodon_punctatus
ENSTRUG00000015619	SMARCA2	99	90.115	ENSSPAG00000020091	-	99	89.887	Stegastes_partitus
ENSTRUG00000015619	SMARCA2	97	80.051	ENSSSCG00000005232	SMARCA2	99	79.987	Sus_scrofa
ENSTRUG00000015619	SMARCA2	95	79.697	ENSTGUG00000005460	SMARCA2	99	80.025	Taeniopygia_guttata
ENSTRUG00000015619	SMARCA2	61	95.238	ENSTBEG00000008767	SMARCA2	68	95.238	Tupaia_belangeri
ENSTRUG00000015619	SMARCA2	93	79.907	ENSTTRG00000002033	SMARCA2	95	79.479	Tursiops_truncatus
ENSTRUG00000015619	SMARCA2	87	78.974	ENSUAMG00000024701	SMARCA2	99	77.568	Ursus_americanus
ENSTRUG00000015619	SMARCA2	84	78.926	ENSVPAG00000001204	SMARCA2	98	72.074	Vicugna_pacos
ENSTRUG00000015619	SMARCA2	74	85.951	ENSVVUG00000004598	SMARCA2	96	86.840	Vulpes_vulpes
ENSTRUG00000015619	SMARCA2	100	76.601	ENSXETG00000015299	smarca2	99	75.883	Xenopus_tropicalis
ENSTRUG00000015619	SMARCA2	90	85.039	ENSXCOG00000011073	SMARCA2	99	85.528	Xiphophorus_couchianus
ENSTRUG00000015619	SMARCA2	99	87.831	ENSXMAG00000015611	SMARCA2	100	88.067	Xiphophorus_maculatus