EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000015623 (Gene tree)
Gene ID: -
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b%2C subunit 3
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 5622 bases
Position: chrHE592015.1:66547-72168
Accession: ZDB-GENE-040426-2901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000039942	CPSF_A	PF03178.15	1.9e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000040083	-	1914	-	ENSTRUP00000039942	638 (aa)	-	H2USL9

Gene Model

Click here to download ENSTRUG00000015623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000015623's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000015623	sf3b3	96	80.728	ENSACIG00000016487	sf3b3	61	80.728	Amphilophus_citrinellus
ENSTRUG00000015623	sf3b3	78	85.143	ENSAPLG00000004996	SF3B3	53	85.143	Anas_platyrhynchos
ENSTRUG00000015623	sf3b3	88	83.642	ENSANAG00000028001	SF3B3	72	64.255	Aotus_nancymaae
ENSTRUG00000015623	sf3b3	96	80.728	ENSACLG00000022555	sf3b3	55	85.738	Astatotilapia_calliptera
ENSTRUG00000015623	sf3b3	88	83.642	ENSCJAG00000014773	SF3B3	55	82.030	Callithrix_jacchus
ENSTRUG00000015623	sf3b3	88	83.642	ENSCATG00000036562	SF3B3	71	64.255	Cercocebus_atys
ENSTRUG00000015623	sf3b3	90	79.452	ENSCSAVG00000011454	-	55	64.992	Ciona_savignyi
ENSTRUG00000015623	sf3b3	78	86.857	ENSCSEG00000014192	sf3b3	52	86.857	Cynoglossus_semilaevis
ENSTRUG00000015623	sf3b3	88	83.642	ENSDNOG00000043626	SF3B3	57	83.642	Dasypus_novemcinctus
ENSTRUG00000015623	sf3b3	88	87.585	ENSELUG00000015417	sf3b3	50	87.585	Esox_lucius
ENSTRUG00000015623	sf3b3	88	87.755	ENSGAFG00000015206	sf3b3	54	85.261	Gambusia_affinis
ENSTRUG00000015623	sf3b3	88	83.642	ENSGGOG00000003246	SF3B3	72	64.255	Gorilla_gorilla
ENSTRUG00000015623	sf3b3	96	80.880	ENSHBUG00000005960	sf3b3	57	85.904	Haplochromis_burtoni
ENSTRUG00000015623	sf3b3	89	86.949	ENSHCOG00000011981	sf3b3	55	82.500	Hippocampus_comes
ENSTRUG00000015623	sf3b3	88	87.015	ENSLBEG00000018302	sf3b3	53	87.015	Labrus_bergylta
ENSTRUG00000015623	sf3b3	88	77.013	ENSLACG00000012501	SF3B3	50	76.756	Latimeria_chalumnae
ENSTRUG00000015623	sf3b3	88	83.980	ENSLAFG00000012219	SF3B3	68	83.980	Loxodonta_africana
ENSTRUG00000015623	sf3b3	88	83.642	ENSMFAG00000045487	SF3B3	71	64.255	Macaca_fascicularis
ENSTRUG00000015623	sf3b3	88	83.642	ENSMLEG00000043891	SF3B3	71	64.255	Mandrillus_leucophaeus
ENSTRUG00000015623	sf3b3	96	80.425	ENSMZEG00005026015	sf3b3	57	85.738	Maylandia_zebra
ENSTRUG00000015623	sf3b3	96	80.728	ENSMZEG00005010836	sf3b3	55	85.738	Maylandia_zebra
ENSTRUG00000015623	sf3b3	96	81.032	ENSMMOG00000002598	sf3b3	61	81.032	Mola_mola
ENSTRUG00000015623	sf3b3	88	78.595	ENSNBRG00000007197	sf3b3	58	84.755	Neolamprologus_brichardi
ENSTRUG00000015623	sf3b3	88	83.642	ENSNLEG00000016127	SF3B3	72	64.255	Nomascus_leucogenys
ENSTRUG00000015623	sf3b3	96	80.577	ENSORLG00000013472	sf3b3	61	80.577	Oryzias_latipes
ENSTRUG00000015623	sf3b3	96	80.577	ENSORLG00020017473	sf3b3	61	80.577	Oryzias_latipes_hni
ENSTRUG00000015623	sf3b3	96	80.425	ENSORLG00015007710	sf3b3	61	80.425	Oryzias_latipes_hsok
ENSTRUG00000015623	sf3b3	88	83.642	ENSPPAG00000026807	SF3B3	72	64.255	Pan_paniscus
ENSTRUG00000015623	sf3b3	90	82.587	ENSPTIG00000020382	SF3B3	57	82.587	Panthera_tigris_altaica
ENSTRUG00000015623	sf3b3	88	83.642	ENSPTRG00000008308	SF3B3	72	64.255	Pan_troglodytes
ENSTRUG00000015623	sf3b3	96	79.818	ENSPKIG00000002712	sf3b3	61	79.818	Paramormyrops_kingsleyae
ENSTRUG00000015623	sf3b3	88	83.980	ENSPSIG00000002232	SF3B3	54	83.980	Pelodiscus_sinensis
ENSTRUG00000015623	sf3b3	88	84.148	ENSPCIG00000014927	SF3B3	50	84.148	Phascolarctos_cinereus
ENSTRUG00000015623	sf3b3	88	87.415	ENSPLAG00000014330	sf3b3	51	87.308	Poecilia_latipinna
ENSTRUG00000015623	sf3b3	79	86.090	ENSPREG00000019669	sf3b3	52	86.090	Poecilia_reticulata
ENSTRUG00000015623	sf3b3	88	83.642	ENSPPYG00000007539	SF3B3	51	83.642	Pongo_abelii
ENSTRUG00000015623	sf3b3	96	80.880	ENSPNYG00000003528	sf3b3	55	85.904	Pundamilia_nyererei
ENSTRUG00000015623	sf3b3	88	83.642	ENSRROG00000045703	SF3B3	71	64.255	Rhinopithecus_roxellana
ENSTRUG00000015623	sf3b3	88	83.642	ENSSBOG00000029156	SF3B3	72	64.255	Saimiri_boliviensis_boliviensis
ENSTRUG00000015623	sf3b3	88	84.148	ENSSHAG00000000372	SF3B3	50	84.148	Sarcophilus_harrisii
ENSTRUG00000015623	sf3b3	96	80.425	ENSSFOG00015012877	sf3b3	61	80.425	Scleropages_formosus
ENSTRUG00000015623	sf3b3	88	88.265	ENSSDUG00000021201	sf3b3	53	86.792	Seriola_dumerili
ENSTRUG00000015623	sf3b3	88	88.095	ENSSLDG00000017532	sf3b3	53	87.692	Seriola_lalandi_dorsalis
ENSTRUG00000015623	sf3b3	90	82.587	ENSSSCG00000025323	SF3B3	55	82.587	Sus_scrofa
ENSTRUG00000015623	sf3b3	88	89.626	ENSTNIG00000004857	sf3b3	54	89.626	Tetraodon_nigroviridis
ENSTRUG00000015623	sf3b3	88	84.407	ENSTBEG00000002946	SF3B3	52	84.407	Tupaia_belangeri
ENSTRUG00000015623	sf3b3	88	83.980	ENSUMAG00000017757	SF3B3	50	83.980	Ursus_maritimus
ENSTRUG00000015623	sf3b3	88	87.245	ENSXMAG00000006334	sf3b3	53	86.174	Xiphophorus_maculatus