EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000015636 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein Musashi homolog 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 15057 bases
Position: chr19:10951000-10966056
Accession: 101063464
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000039978	RRM_1	PF00076.22	1.4e-28	1	2
ENSTRUP00000039978	RRM_1	PF00076.22	1.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000040119	-	1062	XM_003973572	ENSTRUP00000039978	353 (aa)	XP_003973621	H2USQ5

Gene Model

Click here to download ENSTRUG00000015636's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000015636's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000015636	-	74	78.774	ENSTRUG00000021248	msi2a	89	70.432
ENSTRUG00000015636	-	70	72.811	ENSTRUG00000016249	MSI1	100	66.403
ENSTRUG00000015636	-	50	36.782	ENSTRUG00000020491	-	62	36.782
ENSTRUG00000015636	-	52	36.875	ENSTRUG00000021494	-	65	38.150

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000015636	-	79	75.988	ENSG00000135097	MSI1	99	78.448	Homo_sapiens
ENSTRUG00000015636	-	79	91.582	ENSAPOG00000003191	MSI1	89	91.582	Acanthochromis_polyacanthus
ENSTRUG00000015636	-	79	80.380	ENSAPOG00000023458	-	94	80.380	Acanthochromis_polyacanthus
ENSTRUG00000015636	-	78	90.995	ENSAMEG00000013302	MSI1	81	90.625	Ailuropoda_melanoleuca
ENSTRUG00000015636	-	76	89.619	ENSACIG00000017754	-	78	86.486	Amphilophus_citrinellus
ENSTRUG00000015636	-	79	84.950	ENSAOCG00000009031	-	95	85.284	Amphiprion_ocellaris
ENSTRUG00000015636	-	79	85.987	ENSAOCG00000003804	MSI1	94	85.987	Amphiprion_ocellaris
ENSTRUG00000015636	-	79	85.987	ENSAPEG00000003245	MSI1	94	85.987	Amphiprion_percula
ENSTRUG00000015636	-	79	80.380	ENSAPEG00000006857	-	79	80.380	Amphiprion_percula
ENSTRUG00000015636	-	79	85.859	ENSATEG00000017059	MSI1	95	80.696	Anabas_testudineus
ENSTRUG00000015636	-	82	84.451	ENSATEG00000023779	-	93	84.451	Anabas_testudineus
ENSTRUG00000015636	-	79	75.535	ENSACAG00000002762	MSI1	99	72.644	Anolis_carolinensis
ENSTRUG00000015636	-	60	87.678	ENSANAG00000027901	-	88	72.628	Aotus_nancymaae
ENSTRUG00000015636	-	79	75.988	ENSANAG00000027151	MSI1	94	75.988	Aotus_nancymaae
ENSTRUG00000015636	-	92	76.232	ENSACLG00000011230	MSI1	94	84.810	Astatotilapia_calliptera
ENSTRUG00000015636	-	79	80.952	ENSACLG00000000117	-	100	80.952	Astatotilapia_calliptera
ENSTRUG00000015636	-	80	82.609	ENSAMXG00000038960	msi1	75	82.609	Astyanax_mexicanus
ENSTRUG00000015636	-	79	80.645	ENSBTAG00000009800	MSI1	100	80.645	Bos_taurus
ENSTRUG00000015636	-	79	80.645	ENSCJAG00000008578	MSI1	94	75.988	Callithrix_jacchus
ENSTRUG00000015636	-	79	75.684	ENSCAFG00000010283	MSI1	94	75.684	Canis_familiaris
ENSTRUG00000015636	-	79	75.884	ENSCAFG00020020585	MSI1	100	75.884	Canis_lupus_dingo
ENSTRUG00000015636	-	79	68.072	ENSCHIG00000024304	MSI1	95	71.687	Capra_hircus
ENSTRUG00000015636	-	79	75.841	ENSTSYG00000033949	MSI1	95	75.841	Carlito_syrichta
ENSTRUG00000015636	-	79	74.359	ENSCAPG00000003919	MSI1	78	69.818	Cavia_aperea
ENSTRUG00000015636	-	79	75.988	ENSCPOG00000012361	MSI1	100	75.988	Cavia_porcellus
ENSTRUG00000015636	-	79	75.988	ENSCCAG00000035567	MSI1	94	75.988	Cebus_capucinus
ENSTRUG00000015636	-	79	78.683	ENSCATG00000030019	MSI1	94	78.997	Cercocebus_atys
ENSTRUG00000015636	-	79	75.988	ENSCLAG00000011329	MSI1	100	75.988	Chinchilla_lanigera
ENSTRUG00000015636	-	60	90.995	ENSCSAG00000002265	MSI1	77	90.995	Chlorocebus_sabaeus
ENSTRUG00000015636	-	79	83.612	ENSCPBG00000011349	MSI1	92	83.612	Chrysemys_picta_bellii
ENSTRUG00000015636	-	79	75.915	ENSCANG00000040651	MSI1	100	75.915	Colobus_angolensis_palliatus
ENSTRUG00000015636	-	79	75.988	ENSCGRG00001018883	Msi1	94	75.988	Cricetulus_griseus_chok1gshd
ENSTRUG00000015636	-	81	74.852	ENSCGRG00000002191	Msi1	74	72.485	Cricetulus_griseus_crigri
ENSTRUG00000015636	-	79	82.034	ENSCSEG00000011032	MSI1	100	82.034	Cynoglossus_semilaevis
ENSTRUG00000015636	-	79	84.762	ENSCSEG00000005834	-	94	84.762	Cynoglossus_semilaevis
ENSTRUG00000015636	-	79	85.135	ENSCSEG00000008352	-	94	85.135	Cynoglossus_semilaevis
ENSTRUG00000015636	-	79	86.486	ENSCVAG00000009100	MSI1	94	86.486	Cyprinodon_variegatus
ENSTRUG00000015636	-	65	62.963	ENSCVAG00000017463	-	89	62.963	Cyprinodon_variegatus
ENSTRUG00000015636	-	68	74.419	ENSDARG00000102015	CABZ01037298.1	91	74.419	Danio_rerio
ENSTRUG00000015636	-	79	84.122	ENSDARG00000010710	msi1	99	84.122	Danio_rerio
ENSTRUG00000015636	-	80	73.209	ENSDNOG00000005713	MSI1	92	74.143	Dasypus_novemcinctus
ENSTRUG00000015636	-	79	75.831	ENSDORG00000005610	Msi1	94	72.072	Dipodomys_ordii
ENSTRUG00000015636	-	79	73.476	ENSETEG00000004756	MSI1	100	72.121	Echinops_telfairi
ENSTRUG00000015636	-	79	80.645	ENSEASG00005004736	MSI1	94	80.645	Equus_asinus_asinus
ENSTRUG00000015636	-	79	80.645	ENSECAG00000017526	MSI1	94	75.988	Equus_caballus
ENSTRUG00000015636	-	79	75.298	ENSELUG00000023219	MSI1	92	75.298	Esox_lucius
ENSTRUG00000015636	-	79	82.143	ENSELUG00000023280	-	100	82.143	Esox_lucius
ENSTRUG00000015636	-	79	80.645	ENSFCAG00000011007	MSI1	94	75.988	Felis_catus
ENSTRUG00000015636	-	79	79.000	ENSFALG00000007574	MSI1	100	79.000	Ficedula_albicollis
ENSTRUG00000015636	-	79	75.610	ENSFDAG00000019586	MSI1	100	75.610	Fukomys_damarensis
ENSTRUG00000015636	-	79	90.572	ENSFHEG00000003560	-	96	90.572	Fundulus_heteroclitus
ENSTRUG00000015636	-	79	82.609	ENSFHEG00000022446	MSI1	94	81.013	Fundulus_heteroclitus
ENSTRUG00000015636	-	79	73.354	ENSGMOG00000017838	-	90	73.354	Gadus_morhua
ENSTRUG00000015636	-	79	80.831	ENSGMOG00000001006	MSI1	94	80.831	Gadus_morhua
ENSTRUG00000015636	-	77	90.995	ENSGALG00000007227	MSI1	77	88.235	Gallus_gallus
ENSTRUG00000015636	-	79	93.728	ENSGAFG00000021522	MSI1	93	93.728	Gambusia_affinis
ENSTRUG00000015636	-	79	70.134	ENSGAFG00000005860	-	89	70.134	Gambusia_affinis
ENSTRUG00000015636	-	79	76.524	ENSGACG00000008674	-	94	74.085	Gasterosteus_aculeatus
ENSTRUG00000015636	-	79	85.517	ENSGACG00000012679	MSI1	94	85.862	Gasterosteus_aculeatus
ENSTRUG00000015636	-	79	83.612	ENSGAGG00000016037	MSI1	94	83.612	Gopherus_agassizii
ENSTRUG00000015636	-	79	75.796	ENSGGOG00000010328	MSI1	100	75.796	Gorilla_gorilla
ENSTRUG00000015636	-	79	84.810	ENSHBUG00000021921	MSI1	94	84.810	Haplochromis_burtoni
ENSTRUG00000015636	-	79	80.952	ENSHBUG00000011841	-	94	80.952	Haplochromis_burtoni
ENSTRUG00000015636	-	79	75.684	ENSHGLG00000012782	MSI1	94	75.684	Heterocephalus_glaber_female
ENSTRUG00000015636	-	79	75.610	ENSHGLG00100016848	MSI1	100	75.610	Heterocephalus_glaber_male
ENSTRUG00000015636	-	79	85.811	ENSHCOG00000012067	-	89	85.811	Hippocampus_comes
ENSTRUG00000015636	-	79	89.492	ENSHCOG00000012019	MSI1	100	89.492	Hippocampus_comes
ENSTRUG00000015636	-	79	82.550	ENSIPUG00000001976	msi1	98	82.550	Ictalurus_punctatus
ENSTRUG00000015636	-	79	75.884	ENSSTOG00000009799	MSI1	100	75.884	Ictidomys_tridecemlineatus
ENSTRUG00000015636	-	79	77.469	ENSJJAG00000010463	Msi1	94	75.988	Jaculus_jaculus
ENSTRUG00000015636	-	79	71.197	ENSJJAG00000010643	-	94	71.197	Jaculus_jaculus
ENSTRUG00000015636	-	79	90.508	ENSKMAG00000019877	-	100	90.508	Kryptolebias_marmoratus
ENSTRUG00000015636	-	79	81.210	ENSKMAG00000011251	MSI1	94	81.210	Kryptolebias_marmoratus
ENSTRUG00000015636	-	79	86.195	ENSLBEG00000008789	MSI1	94	86.195	Labrus_bergylta
ENSTRUG00000015636	-	79	91.216	ENSLBEG00000001375	-	94	85.714	Labrus_bergylta
ENSTRUG00000015636	-	79	75.841	ENSLACG00000018287	MSI1	100	75.841	Latimeria_chalumnae
ENSTRUG00000015636	-	79	75.410	ENSLAFG00000009412	MSI1	100	75.410	Loxodonta_africana
ENSTRUG00000015636	-	79	75.988	ENSMFAG00000001798	MSI1	100	75.988	Macaca_fascicularis
ENSTRUG00000015636	-	79	75.988	ENSMMUG00000031527	MSI1	91	72.205	Macaca_mulatta
ENSTRUG00000015636	-	79	80.645	ENSMNEG00000040034	MSI1	94	80.645	Macaca_nemestrina
ENSTRUG00000015636	-	79	75.915	ENSMLEG00000003921	MSI1	100	75.915	Mandrillus_leucophaeus
ENSTRUG00000015636	-	79	80.573	ENSMAMG00000002279	MSI1	94	80.573	Mastacembelus_armatus
ENSTRUG00000015636	-	79	91.497	ENSMAMG00000018426	-	95	91.497	Mastacembelus_armatus
ENSTRUG00000015636	-	79	86.149	ENSMZEG00005000340	-	94	86.149	Maylandia_zebra
ENSTRUG00000015636	-	79	84.810	ENSMZEG00005026892	MSI1	94	84.810	Maylandia_zebra
ENSTRUG00000015636	-	59	92.899	ENSMGAG00000016518	-	100	92.899	Meleagris_gallopavo
ENSTRUG00000015636	-	60	90.995	ENSMAUG00000016820	Msi1	92	90.995	Mesocricetus_auratus
ENSTRUG00000015636	-	79	79.683	ENSMICG00000033181	MSI1	94	79.683	Microcebus_murinus
ENSTRUG00000015636	-	88	72.156	ENSMOCG00000002286	Msi1	94	75.684	Microtus_ochrogaster
ENSTRUG00000015636	-	79	91.367	ENSMMOG00000010492	MSI1	96	91.367	Mola_mola
ENSTRUG00000015636	-	79	91.216	ENSMMOG00000012265	-	96	91.216	Mola_mola
ENSTRUG00000015636	-	79	56.024	ENSMODG00000003189	-	100	55.422	Monodelphis_domestica
ENSTRUG00000015636	-	79	91.468	ENSMALG00000001426	-	100	91.468	Monopterus_albus
ENSTRUG00000015636	-	79	83.607	ENSMALG00000017889	MSI1	95	83.607	Monopterus_albus
ENSTRUG00000015636	-	79	76.292	MGP_CAROLIEiJ_G0027626	Msi1	99	82.331	Mus_caroli
ENSTRUG00000015636	-	79	79.245	ENSMUSG00000054256	Msi1	99	82.331	Mus_musculus
ENSTRUG00000015636	-	79	79.495	MGP_PahariEiJ_G0024206	Msi1	99	82.642	Mus_pahari
ENSTRUG00000015636	-	79	76.292	MGP_SPRETEiJ_G0028624	Msi1	99	82.331	Mus_spretus
ENSTRUG00000015636	-	79	75.884	ENSMPUG00000003168	MSI1	100	75.884	Mustela_putorius_furo
ENSTRUG00000015636	-	79	60.417	ENSMLUG00000010313	MSI1	100	63.095	Myotis_lucifugus
ENSTRUG00000015636	-	80	75.602	ENSNGAG00000014508	Msi1	92	71.856	Nannospalax_galili
ENSTRUG00000015636	-	79	86.149	ENSNBRG00000000841	-	94	86.149	Neolamprologus_brichardi
ENSTRUG00000015636	-	75	74.262	ENSNBRG00000018012	MSI1	99	72.541	Neolamprologus_brichardi
ENSTRUG00000015636	-	78	66.159	ENSNLEG00000015636	MSI1	100	66.159	Nomascus_leucogenys
ENSTRUG00000015636	-	79	56.402	ENSMEUG00000015759	MSI1	100	52.727	Notamacropus_eugenii
ENSTRUG00000015636	-	75	67.937	ENSOPRG00000016879	MSI1	100	67.937	Ochotona_princeps
ENSTRUG00000015636	-	79	75.915	ENSODEG00000006328	MSI1	100	75.915	Octodon_degus
ENSTRUG00000015636	-	79	74.242	ENSONIG00000019452	-	94	74.848	Oreochromis_niloticus
ENSTRUG00000015636	-	78	94.811	ENSONIG00000011182	MSI1	94	80.952	Oreochromis_niloticus
ENSTRUG00000015636	-	79	75.884	ENSOCUG00000027716	MSI1	100	75.884	Oryctolagus_cuniculus
ENSTRUG00000015636	-	79	85.619	ENSORLG00000019978	-	93	85.619	Oryzias_latipes
ENSTRUG00000015636	-	79	89.037	ENSORLG00000029593	MSI1	99	89.037	Oryzias_latipes
ENSTRUG00000015636	-	79	90.508	ENSORLG00020008266	MSI1	99	90.508	Oryzias_latipes_hni
ENSTRUG00000015636	-	79	80.696	ENSORLG00020001208	-	67	80.696	Oryzias_latipes_hni
ENSTRUG00000015636	-	79	90.508	ENSORLG00015003916	MSI1	99	90.508	Oryzias_latipes_hsok
ENSTRUG00000015636	-	79	85.859	ENSORLG00015013672	-	71	85.859	Oryzias_latipes_hsok
ENSTRUG00000015636	-	79	82.051	ENSOMEG00000017536	MSI1	100	82.051	Oryzias_melastigma
ENSTRUG00000015636	-	79	89.701	ENSOMEG00000002272	-	100	89.701	Oryzias_melastigma
ENSTRUG00000015636	-	79	68.675	ENSOGAG00000003847	MSI1	98	72.892	Otolemur_garnettii
ENSTRUG00000015636	-	79	76.364	ENSOARG00000012097	MSI1	100	76.364	Ovis_aries
ENSTRUG00000015636	-	79	75.915	ENSPPAG00000043073	MSI1	100	75.915	Pan_paniscus
ENSTRUG00000015636	-	79	75.988	ENSPPRG00000000370	MSI1	94	75.988	Panthera_pardus
ENSTRUG00000015636	-	79	75.884	ENSPTIG00000008913	MSI1	100	75.884	Panthera_tigris_altaica
ENSTRUG00000015636	-	79	78.683	ENSPTRG00000005531	MSI1	94	78.997	Pan_troglodytes
ENSTRUG00000015636	-	79	75.684	ENSPANG00000006335	MSI1	94	75.684	Papio_anubis
ENSTRUG00000015636	-	79	88.176	ENSPKIG00000016497	MSI1	94	88.176	Paramormyrops_kingsleyae
ENSTRUG00000015636	-	79	79.683	ENSPKIG00000023575	-	94	79.683	Paramormyrops_kingsleyae
ENSTRUG00000015636	-	68	69.737	ENSPSIG00000009621	-	100	69.737	Pelodiscus_sinensis
ENSTRUG00000015636	-	79	80.844	ENSPSIG00000011608	-	93	80.844	Pelodiscus_sinensis
ENSTRUG00000015636	-	75	85.159	ENSPMGG00000000514	MSI1	97	85.159	Periophthalmus_magnuspinnatus
ENSTRUG00000015636	-	79	75.421	ENSPMGG00000007743	-	90	74.747	Periophthalmus_magnuspinnatus
ENSTRUG00000015636	-	92	69.048	ENSPEMG00000010491	Msi1	100	66.931	Peromyscus_maniculatus_bairdii
ENSTRUG00000015636	-	79	85.079	ENSPFOG00000008319	-	81	85.079	Poecilia_formosa
ENSTRUG00000015636	-	78	95.283	ENSPFOG00000013113	MSI1	94	80.696	Poecilia_formosa
ENSTRUG00000015636	-	79	87.662	ENSPLAG00000012431	-	94	87.662	Poecilia_latipinna
ENSTRUG00000015636	-	79	91.756	ENSPLAG00000014025	-	93	91.756	Poecilia_latipinna
ENSTRUG00000015636	-	79	90.000	ENSPMEG00000007025	-	93	90.000	Poecilia_mexicana
ENSTRUG00000015636	-	79	85.859	ENSPMEG00000012796	MSI1	94	85.859	Poecilia_mexicana
ENSTRUG00000015636	-	79	90.572	ENSPREG00000021416	-	94	90.572	Poecilia_reticulata
ENSTRUG00000015636	-	65	77.723	ENSPREG00000014574	-	100	77.723	Poecilia_reticulata
ENSTRUG00000015636	-	79	75.988	ENSPPYG00000005027	MSI1	94	75.988	Pongo_abelii
ENSTRUG00000015636	-	60	93.548	ENSPCAG00000002300	MSI1	57	93.548	Procavia_capensis
ENSTRUG00000015636	-	79	80.449	ENSPCOG00000017341	MSI1	94	80.449	Propithecus_coquereli
ENSTRUG00000015636	-	79	53.333	ENSPVAG00000002225	MSI1	63	89.583	Pteropus_vampyrus
ENSTRUG00000015636	-	79	80.952	ENSPNYG00000002529	-	94	80.952	Pundamilia_nyererei
ENSTRUG00000015636	-	79	84.810	ENSPNYG00000004379	MSI1	94	84.810	Pundamilia_nyererei
ENSTRUG00000015636	-	80	83.000	ENSPNAG00000019337	msi1	90	83.000	Pygocentrus_nattereri
ENSTRUG00000015636	-	79	76.206	ENSRNOG00000001156	Msi1	100	76.206	Rattus_norvegicus
ENSTRUG00000015636	-	80	75.602	ENSRBIG00000036889	MSI1	100	75.884	Rhinopithecus_bieti
ENSTRUG00000015636	-	79	75.988	ENSRROG00000041076	MSI1	93	75.988	Rhinopithecus_roxellana
ENSTRUG00000015636	-	79	75.988	ENSSBOG00000030259	MSI1	99	75.988	Saimiri_boliviensis_boliviensis
ENSTRUG00000015636	-	79	62.745	ENSSHAG00000006834	MSI1	100	62.092	Sarcophilus_harrisii
ENSTRUG00000015636	-	80	84.385	ENSSFOG00015014964	-	95	83.810	Scleropages_formosus
ENSTRUG00000015636	-	79	86.195	ENSSFOG00015005350	MSI1	100	86.195	Scleropages_formosus
ENSTRUG00000015636	-	79	81.992	ENSSMAG00000009156	-	71	81.992	Scophthalmus_maximus
ENSTRUG00000015636	-	79	85.235	ENSSMAG00000018824	MSI1	98	85.235	Scophthalmus_maximus
ENSTRUG00000015636	-	83	84.000	ENSSDUG00000022697	-	99	84.615	Seriola_dumerili
ENSTRUG00000015636	-	79	80.696	ENSSDUG00000001027	MSI1	94	80.696	Seriola_dumerili
ENSTRUG00000015636	-	79	85.859	ENSSLDG00000016832	MSI1	94	85.859	Seriola_lalandi_dorsalis
ENSTRUG00000015636	-	83	84.000	ENSSLDG00000018706	-	99	84.615	Seriola_lalandi_dorsalis
ENSTRUG00000015636	-	79	78.616	ENSSPUG00000015741	MSI1	100	78.616	Sphenodon_punctatus
ENSTRUG00000015636	-	79	90.909	ENSSPAG00000013098	-	100	85.443	Stegastes_partitus
ENSTRUG00000015636	-	65	90.173	ENSSPAG00000014085	-	100	90.173	Stegastes_partitus
ENSTRUG00000015636	-	79	80.323	ENSSSCG00000029365	MSI1	100	75.563	Sus_scrofa
ENSTRUG00000015636	-	79	76.453	ENSTGUG00000009534	MSI1	100	76.453	Taeniopygia_guttata
ENSTRUG00000015636	-	79	65.306	ENSTNIG00000019814	-	94	65.306	Tetraodon_nigroviridis
ENSTRUG00000015636	-	79	82.410	ENSTNIG00000011469	MSI1	94	82.410	Tetraodon_nigroviridis
ENSTRUG00000015636	-	79	63.273	ENSTBEG00000007182	MSI1	100	63.273	Tupaia_belangeri
ENSTRUG00000015636	-	60	90.995	ENSTTRG00000005663	MSI1	65	90.995	Tursiops_truncatus
ENSTRUG00000015636	-	61	90.404	ENSUAMG00000015514	MSI1	85	92.228	Ursus_americanus
ENSTRUG00000015636	-	79	77.181	ENSUMAG00000006176	MSI1	88	77.181	Ursus_maritimus
ENSTRUG00000015636	-	80	77.370	ENSVVUG00000020993	MSI1	100	75.915	Vulpes_vulpes
ENSTRUG00000015636	-	79	79.479	ENSXETG00000012216	msi1	94	79.479	Xenopus_tropicalis
ENSTRUG00000015636	-	79	78.644	ENSXCOG00000017605	MSI1	89	78.644	Xiphophorus_couchianus
ENSTRUG00000015636	-	79	91.497	ENSXMAG00000018237	-	90	91.497	Xiphophorus_maculatus
ENSTRUG00000015636	-	79	82.886	ENSXMAG00000027103	MSI1	90	82.886	Xiphophorus_maculatus