EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000015660 (Gene tree)
Gene ID: 101076869
Gene Symbol: apex2
Alias: zgc:55889
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 2
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 3025 bases
Position: chr3:12063565-12066589
Accession: 101076869
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000040034	Exo_endo_phos	PF03372.23	4.6e-16	1	1
ENSTRUP00000049256	Exo_endo_phos	PF03372.23	6.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000040175	-	2151	XM_003963468	ENSTRUP00000040034	558 (aa)	XP_003963517	H2USW1
ENSTRUT00000057061	-	2244	-	ENSTRUP00000049256	589 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000015660's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000015660's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000015660	apex2	99	45.679	ENSG00000169188	APEX2	99	45.679	Homo_sapiens
ENSTRUG00000015660	apex2	100	72.183	ENSAPOG00000005805	apex2	100	72.183	Acanthochromis_polyacanthus
ENSTRUG00000015660	apex2	99	45.070	ENSAMEG00000003608	APEX2	99	45.070	Ailuropoda_melanoleuca
ENSTRUG00000015660	apex2	100	72.855	ENSACIG00000010000	apex2	100	72.855	Amphilophus_citrinellus
ENSTRUG00000015660	apex2	100	72.154	ENSAOCG00000021774	apex2	100	72.518	Amphiprion_ocellaris
ENSTRUG00000015660	apex2	100	72.154	ENSAPEG00000020890	apex2	94	72.518	Amphiprion_percula
ENSTRUG00000015660	apex2	100	71.181	ENSATEG00000023600	apex2	100	71.181	Anabas_testudineus
ENSTRUG00000015660	apex2	99	48.122	ENSACAG00000011201	APEX2	99	48.301	Anolis_carolinensis
ENSTRUG00000015660	apex2	97	40.288	ENSANAG00000020845	-	99	40.288	Aotus_nancymaae
ENSTRUG00000015660	apex2	99	46.208	ENSANAG00000021907	-	99	46.208	Aotus_nancymaae
ENSTRUG00000015660	apex2	100	62.324	ENSAMXG00000007422	apex2	100	62.324	Astyanax_mexicanus
ENSTRUG00000015660	apex2	99	44.894	ENSBTAG00000013177	APEX2	99	44.894	Bos_taurus
ENSTRUG00000015660	apex2	99	45.679	ENSCJAG00000016584	APEX2	99	45.679	Callithrix_jacchus
ENSTRUG00000015660	apex2	99	44.190	ENSCAFG00000014310	APEX2	99	44.190	Canis_familiaris
ENSTRUG00000015660	apex2	99	44.894	ENSCAFG00020013818	APEX2	93	57.589	Canis_lupus_dingo
ENSTRUG00000015660	apex2	99	45.326	ENSCHIG00000019916	APEX2	99	45.423	Capra_hircus
ENSTRUG00000015660	apex2	99	45.855	ENSTSYG00000005612	APEX2	99	46.032	Carlito_syrichta
ENSTRUG00000015660	apex2	99	45.679	ENSCPOG00000007265	APEX2	99	45.679	Cavia_porcellus
ENSTRUG00000015660	apex2	96	41.078	ENSCCAG00000025405	-	96	40.706	Cebus_capucinus
ENSTRUG00000015660	apex2	99	45.503	ENSCATG00000044854	APEX2	99	45.503	Cercocebus_atys
ENSTRUG00000015660	apex2	99	45.951	ENSCLAG00000017315	APEX2	99	46.397	Chinchilla_lanigera
ENSTRUG00000015660	apex2	99	45.150	ENSCSAG00000012124	APEX2	99	45.150	Chlorocebus_sabaeus
ENSTRUG00000015660	apex2	100	46.208	ENSCPBG00000016631	APEX2	99	46.914	Chrysemys_picta_bellii
ENSTRUG00000015660	apex2	87	54.667	ENSCSAVG00000006052	-	100	54.667	Ciona_savignyi
ENSTRUG00000015660	apex2	99	45.679	ENSCANG00000003053	APEX2	99	45.679	Colobus_angolensis_palliatus
ENSTRUG00000015660	apex2	99	45.406	ENSCGRG00001008132	Apex2	99	45.406	Cricetulus_griseus_chok1gshd
ENSTRUG00000015660	apex2	99	45.406	ENSCGRG00000009667	Apex2	85	61.836	Cricetulus_griseus_crigri
ENSTRUG00000015660	apex2	100	65.744	ENSCSEG00000019900	apex2	99	65.744	Cynoglossus_semilaevis
ENSTRUG00000015660	apex2	100	68.339	ENSCVAG00000021583	apex2	100	68.761	Cyprinodon_variegatus
ENSTRUG00000015660	apex2	100	61.053	ENSDARG00000008472	apex2	100	61.053	Danio_rerio
ENSTRUG00000015660	apex2	99	46.384	ENSDNOG00000038901	APEX2	99	46.384	Dasypus_novemcinctus
ENSTRUG00000015660	apex2	87	60.563	ENSEBUG00000015654	apex2	99	60.563	Eptatretus_burgeri
ENSTRUG00000015660	apex2	99	46.643	ENSEASG00005011694	APEX2	90	46.290	Equus_asinus_asinus
ENSTRUG00000015660	apex2	99	46.643	ENSECAG00000026921	APEX2	90	46.290	Equus_caballus
ENSTRUG00000015660	apex2	99	44.755	ENSEEUG00000013172	APEX2	99	44.930	Erinaceus_europaeus
ENSTRUG00000015660	apex2	100	62.735	ENSELUG00000021417	apex2	99	62.564	Esox_lucius
ENSTRUG00000015660	apex2	99	44.133	ENSFCAG00000021990	APEX2	99	44.133	Felis_catus
ENSTRUG00000015660	apex2	99	45.855	ENSFDAG00000008076	APEX2	89	61.611	Fukomys_damarensis
ENSTRUG00000015660	apex2	100	62.522	ENSFHEG00000021411	apex2	99	62.522	Fundulus_heteroclitus
ENSTRUG00000015660	apex2	69	72.308	ENSGMOG00000019681	apex2	99	78.736	Gadus_morhua
ENSTRUG00000015660	apex2	100	66.495	ENSGAFG00000005829	apex2	100	67.596	Gambusia_affinis
ENSTRUG00000015660	apex2	65	84.000	ENSGACG00000012307	apex2	90	84.000	Gasterosteus_aculeatus
ENSTRUG00000015660	apex2	90	45.257	ENSGAGG00000011520	APEX2	88	45.257	Gopherus_agassizii
ENSTRUG00000015660	apex2	99	45.855	ENSGGOG00000002056	APEX2	99	45.855	Gorilla_gorilla
ENSTRUG00000015660	apex2	100	71.071	ENSHBUG00000009938	apex2	100	71.071	Haplochromis_burtoni
ENSTRUG00000015660	apex2	99	46.655	ENSHGLG00000000273	APEX2	89	61.538	Heterocephalus_glaber_female
ENSTRUG00000015660	apex2	100	65.412	ENSHCOG00000010165	apex2	100	65.412	Hippocampus_comes
ENSTRUG00000015660	apex2	100	59.797	ENSIPUG00000000352	APEX2	100	60.477	Ictalurus_punctatus
ENSTRUG00000015660	apex2	99	46.032	ENSSTOG00000025121	APEX2	85	62.019	Ictidomys_tridecemlineatus
ENSTRUG00000015660	apex2	99	45.870	ENSJJAG00000019611	Apex2	93	59.346	Jaculus_jaculus
ENSTRUG00000015660	apex2	100	69.649	ENSKMAG00000006985	apex2	100	69.649	Kryptolebias_marmoratus
ENSTRUG00000015660	apex2	100	72.552	ENSLBEG00000012139	apex2	100	72.378	Labrus_bergylta
ENSTRUG00000015660	apex2	100	49.914	ENSLACG00000000865	APEX2	100	48.722	Latimeria_chalumnae
ENSTRUG00000015660	apex2	100	59.091	ENSLOCG00000014467	apex2	100	59.520	Lepisosteus_oculatus
ENSTRUG00000015660	apex2	99	45.679	ENSLAFG00000018312	APEX2	99	45.679	Loxodonta_africana
ENSTRUG00000015660	apex2	99	45.855	ENSMFAG00000002486	APEX2	99	45.855	Macaca_fascicularis
ENSTRUG00000015660	apex2	99	45.855	ENSMMUG00000008428	APEX2	99	45.855	Macaca_mulatta
ENSTRUG00000015660	apex2	99	45.855	ENSMNEG00000036783	APEX2	99	45.855	Macaca_nemestrina
ENSTRUG00000015660	apex2	99	45.503	ENSMLEG00000028208	APEX2	99	45.503	Mandrillus_leucophaeus
ENSTRUG00000015660	apex2	100	71.062	ENSMAMG00000024220	apex2	100	71.062	Mastacembelus_armatus
ENSTRUG00000015660	apex2	100	71.250	ENSMZEG00005026322	apex2	100	71.250	Maylandia_zebra
ENSTRUG00000015660	apex2	99	44.268	ENSMICG00000043181	APEX2	99	44.268	Microcebus_murinus
ENSTRUG00000015660	apex2	99	45.053	ENSMOCG00000004339	Apex2	87	61.353	Microtus_ochrogaster
ENSTRUG00000015660	apex2	100	72.329	ENSMMOG00000017340	apex2	100	72.077	Mola_mola
ENSTRUG00000015660	apex2	99	49.911	ENSMODG00000005341	APEX2	99	49.911	Monodelphis_domestica
ENSTRUG00000015660	apex2	100	70.154	ENSMALG00000014179	apex2	100	70.669	Monopterus_albus
ENSTRUG00000015660	apex2	99	46.561	MGP_CAROLIEiJ_G0033484	Apex2	100	52.330	Mus_caroli
ENSTRUG00000015660	apex2	99	46.737	ENSMUSG00000025269	Apex2	99	52.330	Mus_musculus
ENSTRUG00000015660	apex2	99	46.737	MGP_PahariEiJ_G0032023	Apex2	92	61.722	Mus_pahari
ENSTRUG00000015660	apex2	99	46.737	MGP_SPRETEiJ_G0034654	Apex2	100	52.330	Mus_spretus
ENSTRUG00000015660	apex2	99	45.599	ENSMPUG00000003293	APEX2	99	45.599	Mustela_putorius_furo
ENSTRUG00000015660	apex2	99	46.454	ENSMLUG00000016298	-	99	46.277	Myotis_lucifugus
ENSTRUG00000015660	apex2	99	45.922	ENSMLUG00000004562	-	99	45.567	Myotis_lucifugus
ENSTRUG00000015660	apex2	99	45.760	ENSNGAG00000013576	Apex2	99	45.760	Nannospalax_galili
ENSTRUG00000015660	apex2	100	70.228	ENSNBRG00000010099	apex2	100	70.228	Neolamprologus_brichardi
ENSTRUG00000015660	apex2	59	56.716	ENSNLEG00000032067	-	76	56.716	Nomascus_leucogenys
ENSTRUG00000015660	apex2	100	71.979	ENSONIG00000016881	apex2	100	71.979	Oreochromis_niloticus
ENSTRUG00000015660	apex2	93	53.668	ENSOANG00000000689	-	96	54.335	Ornithorhynchus_anatinus
ENSTRUG00000015660	apex2	80	60.096	ENSOCUG00000000570	APEX2	82	60.096	Oryctolagus_cuniculus
ENSTRUG00000015660	apex2	100	67.908	ENSORLG00000014053	apex2	100	67.965	Oryzias_latipes
ENSTRUG00000015660	apex2	100	67.782	ENSORLG00020013253	apex2	100	67.965	Oryzias_latipes_hni
ENSTRUG00000015660	apex2	100	67.730	ENSORLG00015007515	apex2	100	67.788	Oryzias_latipes_hsok
ENSTRUG00000015660	apex2	100	70.370	ENSOMEG00000003655	apex2	100	70.194	Oryzias_melastigma
ENSTRUG00000015660	apex2	99	46.479	ENSOGAG00000007797	APEX2	99	46.479	Otolemur_garnettii
ENSTRUG00000015660	apex2	99	45.326	ENSOARG00000005742	APEX2	99	45.423	Ovis_aries
ENSTRUG00000015660	apex2	99	45.855	ENSPPAG00000035747	APEX2	99	45.855	Pan_paniscus
ENSTRUG00000015660	apex2	99	44.133	ENSPPRG00000002440	APEX2	99	44.133	Panthera_pardus
ENSTRUG00000015660	apex2	99	43.958	ENSPTIG00000021651	APEX2	99	43.958	Panthera_tigris_altaica
ENSTRUG00000015660	apex2	99	45.679	ENSPTRG00000021946	APEX2	99	45.679	Pan_troglodytes
ENSTRUG00000015660	apex2	99	45.503	ENSPANG00000003595	APEX2	99	45.503	Papio_anubis
ENSTRUG00000015660	apex2	100	62.653	ENSPKIG00000007752	apex2	100	62.435	Paramormyrops_kingsleyae
ENSTRUG00000015660	apex2	100	67.708	ENSPMGG00000009151	apex2	100	67.714	Periophthalmus_magnuspinnatus
ENSTRUG00000015660	apex2	99	45.053	ENSPEMG00000016475	Apex2	89	58.716	Peromyscus_maniculatus_bairdii
ENSTRUG00000015660	apex2	99	50.180	ENSPCIG00000007633	APEX2	98	50.000	Phascolarctos_cinereus
ENSTRUG00000015660	apex2	100	66.781	ENSPFOG00000000408	apex2	100	66.781	Poecilia_formosa
ENSTRUG00000015660	apex2	100	66.609	ENSPLAG00000023814	apex2	100	66.609	Poecilia_latipinna
ENSTRUG00000015660	apex2	100	66.954	ENSPMEG00000023222	apex2	100	66.954	Poecilia_mexicana
ENSTRUG00000015660	apex2	99	45.503	ENSPPYG00000020388	APEX2	99	45.503	Pongo_abelii
ENSTRUG00000015660	apex2	99	46.737	ENSPCOG00000016083	APEX2	99	46.208	Propithecus_coquereli
ENSTRUG00000015660	apex2	92	46.019	ENSPVAG00000007851	APEX2	99	45.631	Pteropus_vampyrus
ENSTRUG00000015660	apex2	100	70.753	ENSPNYG00000015698	apex2	100	70.753	Pundamilia_nyererei
ENSTRUG00000015660	apex2	100	61.054	ENSPNAG00000011666	apex2	100	60.580	Pygocentrus_nattereri
ENSTRUG00000015660	apex2	99	46.561	ENSRNOG00000000166	Apex2	99	46.561	Rattus_norvegicus
ENSTRUG00000015660	apex2	99	45.679	ENSRBIG00000036500	APEX2	99	45.679	Rhinopithecus_bieti
ENSTRUG00000015660	apex2	99	45.679	ENSRROG00000032674	APEX2	99	45.679	Rhinopithecus_roxellana
ENSTRUG00000015660	apex2	99	46.032	ENSSBOG00000030500	-	99	46.032	Saimiri_boliviensis_boliviensis
ENSTRUG00000015660	apex2	96	37.175	ENSSBOG00000003489	-	96	37.175	Saimiri_boliviensis_boliviensis
ENSTRUG00000015660	apex2	99	50.811	ENSSHAG00000007846	APEX2	99	50.811	Sarcophilus_harrisii
ENSTRUG00000015660	apex2	87	84.615	ENSSFOG00015010354	apex2	100	63.458	Scleropages_formosus
ENSTRUG00000015660	apex2	100	71.076	ENSSMAG00000012753	apex2	100	70.723	Scophthalmus_maximus
ENSTRUG00000015660	apex2	100	73.286	ENSSDUG00000022892	apex2	100	72.935	Seriola_dumerili
ENSTRUG00000015660	apex2	100	71.698	ENSSLDG00000024347	apex2	100	71.355	Seriola_lalandi_dorsalis
ENSTRUG00000015660	apex2	99	45.250	ENSSARG00000010297	APEX2	99	45.205	Sorex_araneus
ENSTRUG00000015660	apex2	100	74.423	ENSSPAG00000016279	apex2	100	74.423	Stegastes_partitus
ENSTRUG00000015660	apex2	99	46.046	ENSSSCG00000012348	-	99	46.046	Sus_scrofa
ENSTRUG00000015660	apex2	85	78.306	ENSTNIG00000003725	apex2	100	78.306	Tetraodon_nigroviridis
ENSTRUG00000015660	apex2	92	45.437	ENSTBEG00000010520	APEX2	99	45.631	Tupaia_belangeri
ENSTRUG00000015660	apex2	99	45.775	ENSUAMG00000004720	APEX2	93	57.589	Ursus_americanus
ENSTRUG00000015660	apex2	99	43.739	ENSUMAG00000002892	APEX2	99	43.816	Ursus_maritimus
ENSTRUG00000015660	apex2	99	45.246	ENSVVUG00000005989	APEX2	99	45.246	Vulpes_vulpes
ENSTRUG00000015660	apex2	99	52.321	ENSXETG00000022026	apex2	99	52.236	Xenopus_tropicalis
ENSTRUG00000015660	apex2	100	66.265	ENSXMAG00000025740	apex2	100	66.609	Xiphophorus_maculatus