EuRBPDB

Description
Ensembl ID
ENSTRUG00000015697 (Gene tree)
Gene ID
101073810
Gene Symbol
rab23
Alias
zgc:110261
Full Name
RAB23%2C member RAS oncogene family
Gene Type
protein_coding
Species
Takifugu_rubripes
Status
putative
Strand
Minus strand
Length
5571 bases
Position
chr4:11778409-11783979
Accession
101073810
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSTRUP00000040117MMR_HSR1PF01926.231.1e-0611
ENSTRUP00000050176MMR_HSR1PF01926.231.3e-0611
ENSTRUP00000054091MMR_HSR1PF01926.231.3e-0611
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSTRUT00000040259-615-ENSTRUP00000040117204 (aa)-H2UT44
ENSTRUT00000055193-3025-ENSTRUP00000054091234 (aa)-UPI000298D5AC
ENSTRUT00000048837-3176XM_003964097ENSTRUP00000050176234 (aa)XP_003964146UPI000298D5AC
Gene Model
Protein-Protein Interaction (PPI)
Paralogs
Ensembl ID
Gene Symbol
Coverage
Identiy
Paralog
Gene Symbol
Coverage
Identiy
ENSTRUG00000015697rab237034.028ENSTRUG00000023011rerg7233.103
ENSTRUG00000015697rab239535.025ENSTRUG00000023252rab6a8834.595
ENSTRUG00000015697rab237533.537ENSTRUG00000008651rasl11a5732.237
ENSTRUG00000015697rab237738.365ENSTRUG00000022559rab308736.932
ENSTRUG00000015697rab238337.714ENSTRUG00000020093-7737.725
ENSTRUG00000015697rab238038.182ENSTRUG00000007504rab25b6938.889
ENSTRUG00000015697rab236931.944ENSTRUG00000005805mras7532.099
ENSTRUG00000015697rab237138.776ENSTRUG00000020012rhebl17838.889
ENSTRUG00000015697rab239035.638ENSTRUG00000024177rab138835.795
ENSTRUG00000015697rab238233.166ENSTRUG00000014595-8432.778
ENSTRUG00000015697rab237835.625ENSTRUG00000025076si:dkey-16l2.167839.796
ENSTRUG00000015697rab237535.065ENSTRUG00000004283rab18b8334.884
ENSTRUG00000015697rab237436.601ENSTRUG00000024455rab126735.714
ENSTRUG00000015697rab239831.188ENSTRUG00000004287rab1ba9032.418
ENSTRUG00000015697rab238032.308ENSTRUG00000021970rasl11b7532.308
ENSTRUG00000015697rab237533.548ENSTRUG00000017824rab157034.667
ENSTRUG00000015697rab237633.684ENSTRUG00000020335rab33a6933.146
ENSTRUG00000015697rab237933.129ENSTRUG00000021619-6733.333
ENSTRUG00000015697rab239630.622ENSTRUG00000021614-8730.526
ENSTRUG00000015697rab239431.707ENSTRUG00000003363rab2a9131.606
ENSTRUG00000015697rab237532.258ENSTRUG00000014783RAB157132.450
ENSTRUG00000015697rab238337.714ENSTRUG00000010082RAB7A7737.725
ENSTRUG00000015697rab237134.459ENSTRUG00000009903zgc:1015596533.775
ENSTRUG00000015697rab237436.184ENSTRUG00000024368rab5aa7335.443
ENSTRUG00000015697rab237535.484ENSTRUG00000025018rab39bb7334.615
ENSTRUG00000015697rab239633.166ENSTRUG00000023164rab1ab9033.880
ENSTRUG00000015697rab238037.423ENSTRUG00000020633rab35b8935.000
ENSTRUG00000015697rab237839.877ENSTRUG00000014481rab34b6237.500
ENSTRUG00000015697rab237031.944ENSTRUG00000024825hrasb7632.877
ENSTRUG00000015697rab237435.256ENSTRUG00000008698rab9a7334.014
ENSTRUG00000015697rab238634.146ENSTRUG00000004984rab18a9934.146
ENSTRUG00000015697rab236935.211ENSTRUG00000017384rras27235.616
ENSTRUG00000015697rab237137.415ENSTRUG00000004902rheb7837.500
ENSTRUG00000015697rab237436.184ENSTRUG00000015590rab5c6735.135
ENSTRUG00000015697rab238532.683ENSTRUG00000024994RAB1A9034.054
ENSTRUG00000015697rab237437.013ENSTRUG00000010393-5834.228
ENSTRUG00000015697rab238034.756ENSTRUG00000020792rab11a6735.172
ENSTRUG00000015697rab237434.641ENSTRUG00000010224rab42a6735.374
ENSTRUG00000015697rab237335.065ENSTRUG00000013963RAB9A7333.333
ENSTRUG00000015697rab237031.944ENSTRUG00000023449kras9230.270
ENSTRUG00000015697rab239537.056ENSTRUG00000004881rab6bb8836.757
ENSTRUG00000015697rab237432.237ENSTRUG00000018380rab22a7332.394
ENSTRUG00000015697rab237834.043ENSTRUG00000011399-8234.091
ENSTRUG00000015697rab237933.742ENSTRUG00000022029rab11bb7334.375
ENSTRUG00000015697rab237534.839ENSTRUG00000007036rab33ba5934.266
ENSTRUG00000015697rab238035.366ENSTRUG00000007556rab11al7935.537
ENSTRUG00000015697rab237438.816ENSTRUG00000009223rab416938.356
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSTRUG00000015697rab239981.780ENSG00000112210RAB239981.780Homo_sapiens
ENSTRUG00000015697rab2310092.340ENSAPOG00000008892rab2310092.340Acanthochromis_polyacanthus
ENSTRUG00000015697rab239981.356ENSAMEG00000006825RAB239981.356Ailuropoda_melanoleuca
ENSTRUG00000015697rab2310094.608ENSACIG00000020496rab2310094.608Amphilophus_citrinellus
ENSTRUG00000015697rab2310094.608ENSAOCG00000004234rab2310094.608Amphiprion_ocellaris
ENSTRUG00000015697rab2310094.608ENSAPEG00000019758rab2310094.608Amphiprion_percula
ENSTRUG00000015697rab2310095.588ENSATEG00000020913rab2310095.588Anabas_testudineus
ENSTRUG00000015697rab237890.000ENSAPLG00000003715RAB239989.773Anas_platyrhynchos
ENSTRUG00000015697rab239978.059ENSACAG00000006656RAB239978.059Anolis_carolinensis
ENSTRUG00000015697rab239981.780ENSANAG00000027052-9981.780Aotus_nancymaae
ENSTRUG00000015697rab2310091.915ENSACLG00000002819rab2310091.915Astatotilapia_calliptera
ENSTRUG00000015697rab2310088.350ENSAMXG00000014960rab2310088.350Astyanax_mexicanus
ENSTRUG00000015697rab239980.508ENSBTAG00000005362RAB239980.508Bos_taurus
ENSTRUG00000015697rab239981.780ENSCJAG00000010247RAB239981.780Callithrix_jacchus
ENSTRUG00000015697rab239981.780ENSCAFG00000002459RAB239981.780Canis_familiaris
ENSTRUG00000015697rab239981.780ENSCAFG00020015900RAB239981.780Canis_lupus_dingo
ENSTRUG00000015697rab239980.508ENSCHIG00000009815RAB239980.508Capra_hircus
ENSTRUG00000015697rab2310081.857ENSTSYG00000029126RAB2310081.857Carlito_syrichta
ENSTRUG00000015697rab239979.574ENSCPOG00000030218RAB239979.574Cavia_porcellus
ENSTRUG00000015697rab239981.356ENSCCAG00000020364RAB239981.356Cebus_capucinus
ENSTRUG00000015697rab239982.203ENSCATG00000027876RAB239982.203Cercocebus_atys
ENSTRUG00000015697rab239980.085ENSCLAG00000000797RAB239980.085Chinchilla_lanigera
ENSTRUG00000015697rab239982.203ENSCSAG00000013438RAB239982.203Chlorocebus_sabaeus
ENSTRUG00000015697rab239980.932ENSCPBG00000022640RAB239980.932Chrysemys_picta_bellii
ENSTRUG00000015697rab2310064.609ENSCING00000001155-10065.432Ciona_intestinalis
ENSTRUG00000015697rab2310062.397ENSCSAVG00000001356-10063.223Ciona_savignyi
ENSTRUG00000015697rab239981.780ENSCANG00000031065RAB239981.780Colobus_angolensis_palliatus
ENSTRUG00000015697rab239981.780ENSCGRG00001008994Rab239981.780Cricetulus_griseus_chok1gshd
ENSTRUG00000015697rab239980.851ENSCGRG00000013630Rab239980.851Cricetulus_griseus_crigri
ENSTRUG00000015697rab2310093.137ENSCSEG00000010565rab2310093.137Cynoglossus_semilaevis
ENSTRUG00000015697rab2310093.137ENSCVAG00000020501rab2310093.137Cyprinodon_variegatus
ENSTRUG00000015697rab2310084.388ENSDARG00000004151rab2310084.388Danio_rerio
ENSTRUG00000015697rab239980.426ENSDNOG00000015501RAB239980.426Dasypus_novemcinctus
ENSTRUG00000015697rab2310079.661ENSDORG00000028344Rab2310079.661Dipodomys_ordii
ENSTRUG00000015697rab238569.942FBgn0037364Rab238259.471Drosophila_melanogaster
ENSTRUG00000015697rab239665.066ENSEBUG00000010861-9165.066Eptatretus_burgeri
ENSTRUG00000015697rab239981.780ENSEASG00005003529RAB239981.780Equus_asinus_asinus
ENSTRUG00000015697rab239981.780ENSECAG00000013427RAB239981.780Equus_caballus
ENSTRUG00000015697rab2310080.169ENSEEUG00000015045RAB2310080.169Erinaceus_europaeus
ENSTRUG00000015697rab2310087.660ENSELUG00000020788rab2310087.660Esox_lucius
ENSTRUG00000015697rab239981.780ENSFCAG00000044358RAB239981.780Felis_catus
ENSTRUG00000015697rab239980.085ENSFALG00000001708RAB239980.085Ficedula_albicollis
ENSTRUG00000015697rab239980.932ENSFDAG00000014834RAB239980.932Fukomys_damarensis
ENSTRUG00000015697rab2310091.915ENSFHEG00000023069rab2310091.915Fundulus_heteroclitus
ENSTRUG00000015697rab2310087.234ENSGMOG00000005102rab2310087.234Gadus_morhua
ENSTRUG00000015697rab239981.780ENSGALG00000016279RAB239981.780Gallus_gallus
ENSTRUG00000015697rab2310092.647ENSGAFG00000007684rab2310092.647Gambusia_affinis
ENSTRUG00000015697rab2310091.915ENSGACG00000006151rab2310091.915Gasterosteus_aculeatus
ENSTRUG00000015697rab239980.508ENSGAGG00000012709RAB239980.508Gopherus_agassizii
ENSTRUG00000015697rab2310093.627ENSHBUG00000007966rab2310093.627Haplochromis_burtoni
ENSTRUG00000015697rab239981.356ENSHGLG00000013030-9981.356Heterocephalus_glaber_female
ENSTRUG00000015697rab239969.167ENSHGLG00000009371-9968.333Heterocephalus_glaber_female
ENSTRUG00000015697rab239969.167ENSHGLG00100017177-9968.333Heterocephalus_glaber_male
ENSTRUG00000015697rab239981.356ENSHGLG00100005945-9981.356Heterocephalus_glaber_male
ENSTRUG00000015697rab2310089.216ENSHCOG00000013919rab2310089.216Hippocampus_comes
ENSTRUG00000015697rab2310086.893ENSIPUG00000016494rab2310086.893Ictalurus_punctatus
ENSTRUG00000015697rab239980.932ENSSTOG00000010962RAB239980.932Ictidomys_tridecemlineatus
ENSTRUG00000015697rab239981.780ENSJJAG00000020094Rab239981.780Jaculus_jaculus
ENSTRUG00000015697rab2310092.340ENSKMAG00000018270rab2310092.340Kryptolebias_marmoratus
ENSTRUG00000015697rab2310093.627ENSLBEG00000013176rab2310093.627Labrus_bergylta
ENSTRUG00000015697rab2310083.966ENSLACG00000004025RAB2310083.966Latimeria_chalumnae
ENSTRUG00000015697rab2310083.750ENSLOCG00000016999rab2310083.750Lepisosteus_oculatus
ENSTRUG00000015697rab239982.203ENSLAFG00000007209RAB239982.203Loxodonta_africana
ENSTRUG00000015697rab239982.203ENSMFAG00000032369RAB239982.203Macaca_fascicularis
ENSTRUG00000015697rab239982.203ENSMMUG00000018003RAB239982.203Macaca_mulatta
ENSTRUG00000015697rab239982.203ENSMNEG00000037012RAB239982.203Macaca_nemestrina
ENSTRUG00000015697rab239982.203ENSMLEG00000042429RAB239982.203Mandrillus_leucophaeus
ENSTRUG00000015697rab2310094.608ENSMAMG00000015456rab2310094.608Mastacembelus_armatus
ENSTRUG00000015697rab2310093.627ENSMZEG00005005441rab2310093.627Maylandia_zebra
ENSTRUG00000015697rab239981.356ENSMGAG00000013882RAB239981.356Meleagris_gallopavo
ENSTRUG00000015697rab239982.627ENSMICG00000014037RAB239982.627Microcebus_murinus
ENSTRUG00000015697rab239981.356ENSMOCG00000000444Rab239981.356Microtus_ochrogaster
ENSTRUG00000015697rab2310096.569ENSMMOG00000007703rab2310096.569Mola_mola
ENSTRUG00000015697rab239981.780ENSMODG00000018720RAB239981.780Monodelphis_domestica
ENSTRUG00000015697rab2310092.157ENSMALG00000002136rab2310092.157Monopterus_albus
ENSTRUG00000015697rab239980.085MGP_CAROLIEiJ_G0014015Rab239980.085Mus_caroli
ENSTRUG00000015697rab239979.661ENSMUSG00000004768Rab239979.661Mus_musculus
ENSTRUG00000015697rab239979.237MGP_PahariEiJ_G0027261Rab239979.237Mus_pahari
ENSTRUG00000015697rab239979.661MGP_SPRETEiJ_G0014820Rab239979.661Mus_spretus
ENSTRUG00000015697rab239973.840ENSMPUG00000002642RAB239973.840Mustela_putorius_furo
ENSTRUG00000015697rab239981.780ENSMLUG00000004058RAB239981.780Myotis_lucifugus
ENSTRUG00000015697rab239981.356ENSNGAG00000018038Rab239981.356Nannospalax_galili
ENSTRUG00000015697rab2310093.627ENSNBRG00000013691rab2310093.627Neolamprologus_brichardi
ENSTRUG00000015697rab239982.203ENSNLEG00000027830RAB239982.203Nomascus_leucogenys
ENSTRUG00000015697rab239979.661ENSODEG00000016056RAB239979.661Octodon_degus
ENSTRUG00000015697rab2310091.949ENSONIG00000009749rab2310091.949Oreochromis_niloticus
ENSTRUG00000015697rab239982.203ENSOANG00000001398RAB239982.203Ornithorhynchus_anatinus
ENSTRUG00000015697rab239982.203ENSOCUG00000004816RAB239982.203Oryctolagus_cuniculus
ENSTRUG00000015697rab2310091.176ENSORLG00000010115rab2310091.176Oryzias_latipes
ENSTRUG00000015697rab2310091.176ENSORLG00020020220rab2310091.176Oryzias_latipes_hni
ENSTRUG00000015697rab2310091.176ENSORLG00015004033rab2310091.176Oryzias_latipes_hsok
ENSTRUG00000015697rab2310092.157ENSOMEG00000001706rab2310092.157Oryzias_melastigma
ENSTRUG00000015697rab239981.356ENSOGAG00000005675RAB239981.356Otolemur_garnettii
ENSTRUG00000015697rab239980.508ENSOARG00000005749RAB239980.508Ovis_aries
ENSTRUG00000015697rab239981.780ENSPPAG00000010023RAB239981.780Pan_paniscus
ENSTRUG00000015697rab239981.356ENSPPRG00000012453RAB239981.356Panthera_pardus
ENSTRUG00000015697rab239981.780ENSPTIG00000009435RAB239981.780Panthera_tigris_altaica
ENSTRUG00000015697rab239982.203ENSPTRG00000043341RAB239982.203Pan_troglodytes
ENSTRUG00000015697rab239982.203ENSPANG00000017772RAB239982.203Papio_anubis
ENSTRUG00000015697rab237893.750ENSPKIG00000024310rab238792.045Paramormyrops_kingsleyae
ENSTRUG00000015697rab239980.508ENSPSIG00000015579RAB239980.508Pelodiscus_sinensis
ENSTRUG00000015697rab2310089.216ENSPMGG00000008577rab2310089.216Periophthalmus_magnuspinnatus
ENSTRUG00000015697rab239980.508ENSPEMG00000023271Rab239980.508Peromyscus_maniculatus_bairdii
ENSTRUG00000015697rab2310068.376ENSPMAG00000006835-10068.376Petromyzon_marinus
ENSTRUG00000015697rab239980.932ENSPCIG00000007267RAB239980.932Phascolarctos_cinereus
ENSTRUG00000015697rab2310091.489ENSPFOG00000011493rab2310091.489Poecilia_formosa
ENSTRUG00000015697rab2310093.137ENSPLAG00000011697rab2310093.137Poecilia_latipinna
ENSTRUG00000015697rab2310093.137ENSPMEG00000017300rab2310093.137Poecilia_mexicana
ENSTRUG00000015697rab2310093.627ENSPREG00000022509rab2310093.627Poecilia_reticulata
ENSTRUG00000015697rab239982.203ENSPPYG00000016739RAB239982.203Pongo_abelii
ENSTRUG00000015697rab239982.203ENSPCOG00000028471RAB239982.203Propithecus_coquereli
ENSTRUG00000015697rab239974.576ENSPVAG00000017693RAB239974.576Pteropus_vampyrus
ENSTRUG00000015697rab2310093.627ENSPNYG00000019639rab2310093.627Pundamilia_nyererei
ENSTRUG00000015697rab2310087.864ENSPNAG00000024728rab2310087.864Pygocentrus_nattereri
ENSTRUG00000015697rab239980.932ENSRNOG00000012629Rab239980.932Rattus_norvegicus
ENSTRUG00000015697rab239977.593ENSRBIG00000030547RAB239977.593Rhinopithecus_bieti
ENSTRUG00000015697rab239982.203ENSRROG00000035920RAB239982.203Rhinopithecus_roxellana
ENSTRUG00000015697rab239981.356ENSSBOG00000033237RAB239981.356Saimiri_boliviensis_boliviensis
ENSTRUG00000015697rab239980.932ENSSHAG00000006379RAB239980.932Sarcophilus_harrisii
ENSTRUG00000015697rab2310089.806ENSSFOG00015012604rab2310089.806Scleropages_formosus
ENSTRUG00000015697rab2310094.608ENSSMAG00000006341rab2310094.608Scophthalmus_maximus
ENSTRUG00000015697rab2310094.608ENSSDUG00000023508rab2310094.608Seriola_dumerili
ENSTRUG00000015697rab2310094.608ENSSLDG00000000287rab2310094.608Seriola_lalandi_dorsalis
ENSTRUG00000015697rab239980.508ENSSARG00000013689RAB239980.508Sorex_araneus
ENSTRUG00000015697rab239982.627ENSSPUG00000006274RAB239982.627Sphenodon_punctatus
ENSTRUG00000015697rab2310094.608ENSSPAG00000010373rab2310094.608Stegastes_partitus
ENSTRUG00000015697rab239983.415ENSSSCG00000029539RAB239983.415Sus_scrofa
ENSTRUG00000015697rab239980.508ENSTGUG00000012794RAB239980.508Taeniopygia_guttata
ENSTRUG00000015697rab2310094.444ENSTNIG00000016575rab2310094.444Tetraodon_nigroviridis
ENSTRUG00000015697rab239981.780ENSUAMG00000013367RAB239981.780Ursus_americanus
ENSTRUG00000015697rab239981.780ENSUMAG00000018629RAB239981.780Ursus_maritimus
ENSTRUG00000015697rab239256.021ENSVPAG00000006805RAB2310062.827Vicugna_pacos
ENSTRUG00000015697rab239982.203ENSVVUG00000008535RAB239982.203Vulpes_vulpes
ENSTRUG00000015697rab2310077.731ENSXETG00000004449rab2310077.731Xenopus_tropicalis
ENSTRUG00000015697rab2310090.638ENSXCOG00000011864rab2310090.638Xiphophorus_couchianus
ENSTRUG00000015697rab2310091.064ENSXMAG00000009387rab2310091.064Xiphophorus_maculatus