EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000015732 (Gene tree)
Gene ID: 101079485
Gene Symbol: cnot3a
Alias: fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name: CCR4-NOT transcription complex subunit 3
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 9759 bases
Position: chrHE591744.1:229469-239227
Accession: 101079485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000040211	Not3	PF04065.15	8.6e-97	1	1
ENSTRUP00000040211	NOT2_3_5	PF04153.18	1.6e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000040353	-	7099	XM_011618810	ENSTRUP00000040211	900 (aa)	XP_011617112	H2UTD8

Gene Model

Click here to download ENSTRUG00000015732's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000015732's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000015732	cnot3a	68	90.164	ENSG00000088038	CNOT3	100	93.814	Homo_sapiens
ENSTRUG00000015732	cnot3a	58	88.256	ENSAPOG00000015499	CNOT3	92	88.256	Acanthochromis_polyacanthus
ENSTRUG00000015732	cnot3a	58	86.159	ENSAPOG00000015002	cnot3b	76	88.448	Acanthochromis_polyacanthus
ENSTRUG00000015732	cnot3a	68	89.836	ENSAMEG00000004528	CNOT3	85	90.132	Ailuropoda_melanoleuca
ENSTRUG00000015732	cnot3a	100	89.266	ENSACIG00000006635	cnot3a	100	93.522	Amphilophus_citrinellus
ENSTRUG00000015732	cnot3a	60	90.625	ENSACIG00000003652	cnot3b	99	84.146	Amphilophus_citrinellus
ENSTRUG00000015732	cnot3a	97	61.394	ENSAOCG00000018385	-	99	73.661	Amphiprion_ocellaris
ENSTRUG00000015732	cnot3a	50	86.414	ENSAOCG00000023769	cnot3a	99	87.639	Amphiprion_ocellaris
ENSTRUG00000015732	cnot3a	97	63.707	ENSAPEG00000002640	cnot3b	80	83.898	Amphiprion_percula
ENSTRUG00000015732	cnot3a	100	90.597	ENSAPEG00000006624	cnot3a	100	90.144	Amphiprion_percula
ENSTRUG00000015732	cnot3a	100	90.000	ENSATEG00000022737	cnot3a	100	90.209	Anabas_testudineus
ENSTRUG00000015732	cnot3a	69	90.909	ENSACAG00000016085	CNOT3	88	91.447	Anolis_carolinensis
ENSTRUG00000015732	cnot3a	76	90.164	ENSANAG00000025756	CNOT3	84	90.461	Aotus_nancymaae
ENSTRUG00000015732	cnot3a	100	91.218	ENSACLG00000021136	cnot3a	100	91.109	Astatotilapia_calliptera
ENSTRUG00000015732	cnot3a	100	67.412	ENSAMXG00000009447	cnot3b	70	90.811	Astyanax_mexicanus
ENSTRUG00000015732	cnot3a	100	75.135	ENSAMXG00000012359	cnot3a	100	75.027	Astyanax_mexicanus
ENSTRUG00000015732	cnot3a	69	89.068	ENSBTAG00000014900	CNOT3	85	90.461	Bos_taurus
ENSTRUG00000015732	cnot3a	68	90.164	ENSCJAG00000001094	CNOT3	84	90.461	Callithrix_jacchus
ENSTRUG00000015732	cnot3a	68	90.164	ENSCAFG00000002699	CNOT3	84	90.461	Canis_familiaris
ENSTRUG00000015732	cnot3a	68	90.164	ENSCAFG00020018359	CNOT3	84	90.461	Canis_lupus_dingo
ENSTRUG00000015732	cnot3a	64	87.097	ENSCHIG00000015302	CNOT3	77	88.449	Capra_hircus
ENSTRUG00000015732	cnot3a	68	90.164	ENSTSYG00000008058	CNOT3	85	90.461	Carlito_syrichta
ENSTRUG00000015732	cnot3a	74	79.339	ENSCAPG00000009533	CNOT3	85	90.461	Cavia_aperea
ENSTRUG00000015732	cnot3a	74	79.339	ENSCPOG00000020741	CNOT3	85	90.461	Cavia_porcellus
ENSTRUG00000015732	cnot3a	76	90.164	ENSCCAG00000036290	CNOT3	84	90.461	Cebus_capucinus
ENSTRUG00000015732	cnot3a	68	90.164	ENSCATG00000030324	CNOT3	85	90.461	Cercocebus_atys
ENSTRUG00000015732	cnot3a	75	89.068	ENSCLAG00000003302	CNOT3	100	85.366	Chinchilla_lanigera
ENSTRUG00000015732	cnot3a	68	90.164	ENSCSAG00000001900	CNOT3	85	90.461	Chlorocebus_sabaeus
ENSTRUG00000015732	cnot3a	70	90.260	ENSCPBG00000011655	CNOT3	88	91.118	Chrysemys_picta_bellii
ENSTRUG00000015732	cnot3a	72	58.176	ENSCING00000000293	-	72	68.033	Ciona_intestinalis
ENSTRUG00000015732	cnot3a	69	88.746	ENSCANG00000013408	CNOT3	85	90.461	Colobus_angolensis_palliatus
ENSTRUG00000015732	cnot3a	68	90.492	ENSCGRG00001000855	Cnot3	85	90.789	Cricetulus_griseus_chok1gshd
ENSTRUG00000015732	cnot3a	100	88.829	ENSCSEG00000003574	cnot3a	100	88.178	Cynoglossus_semilaevis
ENSTRUG00000015732	cnot3a	100	58.242	ENSCSEG00000016892	cnot3b	70	79.934	Cynoglossus_semilaevis
ENSTRUG00000015732	cnot3a	100	84.818	ENSCVAG00000008168	cnot3a	100	84.048	Cyprinodon_variegatus
ENSTRUG00000015732	cnot3a	100	77.402	ENSDARG00000007135	cnot3a	100	76.503	Danio_rerio
ENSTRUG00000015732	cnot3a	68	90.164	ENSDNOG00000045972	CNOT3	85	90.461	Dasypus_novemcinctus
ENSTRUG00000015732	cnot3a	68	90.164	ENSDORG00000008021	Cnot3	100	80.460	Dipodomys_ordii
ENSTRUG00000015732	cnot3a	53	100.000	ENSETEG00000006305	CNOT3	63	100.000	Echinops_telfairi
ENSTRUG00000015732	cnot3a	72	71.753	ENSEBUG00000010437	cnot3a	71	69.583	Eptatretus_burgeri
ENSTRUG00000015732	cnot3a	68	90.164	ENSEASG00005021591	CNOT3	84	90.461	Equus_asinus_asinus
ENSTRUG00000015732	cnot3a	68	90.164	ENSECAG00000023181	CNOT3	84	90.461	Equus_caballus
ENSTRUG00000015732	cnot3a	100	81.446	ENSELUG00000014743	cnot3a	100	81.230	Esox_lucius
ENSTRUG00000015732	cnot3a	100	67.616	ENSELUG00000000953	cnot3b	57	62.712	Esox_lucius
ENSTRUG00000015732	cnot3a	69	89.068	ENSFCAG00000014042	CNOT3	85	90.461	Felis_catus
ENSTRUG00000015732	cnot3a	100	83.664	ENSFHEG00000023166	cnot3a	96	97.009	Fundulus_heteroclitus
ENSTRUG00000015732	cnot3a	54	67.057	ENSFHEG00000001696	cnot3b	100	63.901	Fundulus_heteroclitus
ENSTRUG00000015732	cnot3a	94	80.516	ENSGMOG00000005365	cnot3a	98	79.250	Gadus_morhua
ENSTRUG00000015732	cnot3a	100	85.777	ENSGAFG00000013094	cnot3a	100	85.447	Gambusia_affinis
ENSTRUG00000015732	cnot3a	100	65.554	ENSGAFG00000003459	cnot3b	100	64.169	Gambusia_affinis
ENSTRUG00000015732	cnot3a	94	82.803	ENSGACG00000011489	cnot3a	98	82.921	Gasterosteus_aculeatus
ENSTRUG00000015732	cnot3a	64	89.412	ENSGAGG00000012677	CNOT3	81	89.412	Gopherus_agassizii
ENSTRUG00000015732	cnot3a	68	90.164	ENSGGOG00000012996	CNOT3	84	90.461	Gorilla_gorilla
ENSTRUG00000015732	cnot3a	99	59.957	ENSHBUG00000019699	cnot3b	57	56.874	Haplochromis_burtoni
ENSTRUG00000015732	cnot3a	100	91.328	ENSHBUG00000005275	cnot3a	100	91.218	Haplochromis_burtoni
ENSTRUG00000015732	cnot3a	69	89.068	ENSHGLG00000008821	CNOT3	100	80.460	Heterocephalus_glaber_female
ENSTRUG00000015732	cnot3a	60	83.908	ENSHGLG00100006181	CNOT3	100	80.460	Heterocephalus_glaber_male
ENSTRUG00000015732	cnot3a	100	84.809	ENSHCOG00000020968	cnot3a	97	95.434	Hippocampus_comes
ENSTRUG00000015732	cnot3a	100	67.144	ENSIPUG00000000167	cnot3	100	68.197	Ictalurus_punctatus
ENSTRUG00000015732	cnot3a	68	90.164	ENSSTOG00000028248	CNOT3	85	90.461	Ictidomys_tridecemlineatus
ENSTRUG00000015732	cnot3a	68	90.492	ENSJJAG00000014594	Cnot3	100	80.460	Jaculus_jaculus
ENSTRUG00000015732	cnot3a	100	87.199	ENSKMAG00000004863	cnot3a	100	87.418	Kryptolebias_marmoratus
ENSTRUG00000015732	cnot3a	96	66.592	ENSLBEG00000018278	cnot3b	72	90.461	Labrus_bergylta
ENSTRUG00000015732	cnot3a	56	97.706	ENSLBEG00000017296	cnot3a	68	97.706	Labrus_bergylta
ENSTRUG00000015732	cnot3a	69	87.781	ENSLACG00000009742	CNOT3	88	89.474	Latimeria_chalumnae
ENSTRUG00000015732	cnot3a	53	95.210	ENSLOCG00000000005	cnot3b	79	92.857	Lepisosteus_oculatus
ENSTRUG00000015732	cnot3a	68	89.542	ENSLAFG00000022133	CNOT3	84	89.836	Loxodonta_africana
ENSTRUG00000015732	cnot3a	68	90.164	ENSMFAG00000040073	CNOT3	85	90.461	Macaca_fascicularis
ENSTRUG00000015732	cnot3a	61	92.437	ENSMMUG00000009698	CNOT3	100	95.098	Macaca_mulatta
ENSTRUG00000015732	cnot3a	68	90.164	ENSMNEG00000036750	CNOT3	85	90.461	Macaca_nemestrina
ENSTRUG00000015732	cnot3a	68	90.164	ENSMLEG00000036579	CNOT3	84	90.461	Mandrillus_leucophaeus
ENSTRUG00000015732	cnot3a	100	89.341	ENSMAMG00000019397	cnot3a	100	89.890	Mastacembelus_armatus
ENSTRUG00000015732	cnot3a	100	91.218	ENSMZEG00005016304	cnot3a	100	91.109	Maylandia_zebra
ENSTRUG00000015732	cnot3a	68	90.492	ENSMAUG00000014996	Cnot3	85	90.789	Mesocricetus_auratus
ENSTRUG00000015732	cnot3a	68	90.164	ENSMICG00000002370	CNOT3	84	90.461	Microcebus_murinus
ENSTRUG00000015732	cnot3a	61	88.462	ENSMMOG00000013086	cnot3b	75	87.097	Mola_mola
ENSTRUG00000015732	cnot3a	100	88.975	ENSMMOG00000016446	cnot3a	100	88.864	Mola_mola
ENSTRUG00000015732	cnot3a	60	90.164	ENSMODG00000004066	CNOT3	73	90.461	Monodelphis_domestica
ENSTRUG00000015732	cnot3a	100	88.950	ENSMALG00000009204	cnot3a	100	89.724	Monopterus_albus
ENSTRUG00000015732	cnot3a	59	86.824	ENSMALG00000004936	cnot3b	77	86.532	Monopterus_albus
ENSTRUG00000015732	cnot3a	68	90.492	MGP_CAROLIEiJ_G0029095	Cnot3	100	98.000	Mus_caroli
ENSTRUG00000015732	cnot3a	68	90.492	ENSMUSG00000035632	Cnot3	100	98.000	Mus_musculus
ENSTRUG00000015732	cnot3a	77	75.500	MGP_PahariEiJ_G0020964	Cnot3	100	98.000	Mus_pahari
ENSTRUG00000015732	cnot3a	68	90.492	MGP_SPRETEiJ_G0030148	Cnot3	100	98.000	Mus_spretus
ENSTRUG00000015732	cnot3a	69	89.068	ENSMPUG00000010352	CNOT3	85	90.461	Mustela_putorius_furo
ENSTRUG00000015732	cnot3a	68	90.164	ENSNGAG00000013266	Cnot3	85	90.461	Nannospalax_galili
ENSTRUG00000015732	cnot3a	91	76.056	ENSNBRG00000003336	cnot3b	95	88.053	Neolamprologus_brichardi
ENSTRUG00000015732	cnot3a	100	89.243	ENSNBRG00000002401	cnot3a	100	89.133	Neolamprologus_brichardi
ENSTRUG00000015732	cnot3a	68	90.164	ENSNLEG00000006272	CNOT3	92	90.461	Nomascus_leucogenys
ENSTRUG00000015732	cnot3a	68	90.164	ENSODEG00000000705	CNOT3	100	88.608	Octodon_degus
ENSTRUG00000015732	cnot3a	100	90.471	ENSONIG00000006568	cnot3a	100	90.471	Oreochromis_niloticus
ENSTRUG00000015732	cnot3a	68	90.164	ENSOCUG00000007691	CNOT3	85	90.461	Oryctolagus_cuniculus
ENSTRUG00000015732	cnot3a	100	87.569	ENSORLG00000011174	cnot3a	100	87.349	Oryzias_latipes
ENSTRUG00000015732	cnot3a	100	87.267	ENSORLG00020008009	cnot3a	100	86.937	Oryzias_latipes_hni
ENSTRUG00000015732	cnot3a	100	87.335	ENSORLG00015013729	cnot3a	100	87.004	Oryzias_latipes_hsok
ENSTRUG00000015732	cnot3a	100	87.253	ENSOMEG00000010309	cnot3a	100	86.813	Oryzias_melastigma
ENSTRUG00000015732	cnot3a	77	75.377	ENSOGAG00000006945	CNOT3	84	90.461	Otolemur_garnettii
ENSTRUG00000015732	cnot3a	67	64.013	ENSOARG00000002981	CNOT3	66	91.444	Ovis_aries
ENSTRUG00000015732	cnot3a	68	90.164	ENSPPAG00000002748	CNOT3	84	90.461	Pan_paniscus
ENSTRUG00000015732	cnot3a	69	89.068	ENSPPRG00000011705	CNOT3	85	90.461	Panthera_pardus
ENSTRUG00000015732	cnot3a	67	90.604	ENSPTIG00000008781	CNOT3	96	90.604	Panthera_tigris_altaica
ENSTRUG00000015732	cnot3a	68	90.164	ENSPTRG00000011444	CNOT3	84	90.461	Pan_troglodytes
ENSTRUG00000015732	cnot3a	68	90.164	ENSPTRG00000046717	-	84	90.461	Pan_troglodytes
ENSTRUG00000015732	cnot3a	68	90.164	ENSPANG00000009375	CNOT3	85	90.461	Papio_anubis
ENSTRUG00000015732	cnot3a	61	94.017	ENSPKIG00000015967	-	100	88.235	Paramormyrops_kingsleyae
ENSTRUG00000015732	cnot3a	100	67.447	ENSPKIG00000011733	CNOT3	80	57.062	Paramormyrops_kingsleyae
ENSTRUG00000015732	cnot3a	77	75.377	ENSPEMG00000024185	Cnot3	85	90.789	Peromyscus_maniculatus_bairdii
ENSTRUG00000015732	cnot3a	69	90.492	ENSPCIG00000023018	CNOT3	96	90.789	Phascolarctos_cinereus
ENSTRUG00000015732	cnot3a	100	65.106	ENSPFOG00000007168	cnot3b	100	64.387	Poecilia_formosa
ENSTRUG00000015732	cnot3a	100	85.809	ENSPFOG00000008693	cnot3a	92	94.702	Poecilia_formosa
ENSTRUG00000015732	cnot3a	100	65.106	ENSPLAG00000013457	cnot3b	100	64.387	Poecilia_latipinna
ENSTRUG00000015732	cnot3a	100	86.108	ENSPLAG00000013324	cnot3a	100	85.557	Poecilia_latipinna
ENSTRUG00000015732	cnot3a	100	65.605	ENSPMEG00000010184	cnot3b	100	64.200	Poecilia_mexicana
ENSTRUG00000015732	cnot3a	100	86.233	ENSPMEG00000017718	cnot3a	100	85.573	Poecilia_mexicana
ENSTRUG00000015732	cnot3a	100	83.607	ENSPREG00000007592	cnot3a	100	93.522	Poecilia_reticulata
ENSTRUG00000015732	cnot3a	99	60.691	ENSPREG00000000662	cnot3b	97	60.596	Poecilia_reticulata
ENSTRUG00000015732	cnot3a	68	89.836	ENSPPYG00000010372	CNOT3	84	90.132	Pongo_abelii
ENSTRUG00000015732	cnot3a	68	90.164	ENSPCOG00000017673	CNOT3	84	90.461	Propithecus_coquereli
ENSTRUG00000015732	cnot3a	69	88.424	ENSPVAG00000015564	CNOT3	85	89.803	Pteropus_vampyrus
ENSTRUG00000015732	cnot3a	99	60.557	ENSPNYG00000003358	cnot3b	99	60.846	Pundamilia_nyererei
ENSTRUG00000015732	cnot3a	100	91.218	ENSPNYG00000002282	cnot3a	100	91.109	Pundamilia_nyererei
ENSTRUG00000015732	cnot3a	100	74.106	ENSPNAG00000017679	cnot3a	100	74.348	Pygocentrus_nattereri
ENSTRUG00000015732	cnot3a	68	90.492	ENSRNOG00000053234	Cnot3	85	90.789	Rattus_norvegicus
ENSTRUG00000015732	cnot3a	68	90.164	ENSRBIG00000031025	CNOT3	85	90.461	Rhinopithecus_bieti
ENSTRUG00000015732	cnot3a	68	90.164	ENSRROG00000003872	CNOT3	85	90.461	Rhinopithecus_roxellana
ENSTRUG00000015732	cnot3a	76	90.164	ENSSBOG00000030268	CNOT3	84	90.461	Saimiri_boliviensis_boliviensis
ENSTRUG00000015732	cnot3a	100	69.826	ENSSFOG00015019203	-	100	68.764	Scleropages_formosus
ENSTRUG00000015732	cnot3a	100	70.229	ENSSFOG00015000248	cnot3	100	70.044	Scleropages_formosus
ENSTRUG00000015732	cnot3a	100	89.760	ENSSMAG00000013235	cnot3a	100	89.107	Scophthalmus_maximus
ENSTRUG00000015732	cnot3a	100	90.153	ENSSDUG00000008181	cnot3a	100	93.927	Seriola_dumerili
ENSTRUG00000015732	cnot3a	96	91.487	ENSSLDG00000014733	cnot3a	99	92.168	Seriola_lalandi_dorsalis
ENSTRUG00000015732	cnot3a	78	76.276	ENSSPUG00000008510	CNOT3	88	91.118	Sphenodon_punctatus
ENSTRUG00000015732	cnot3a	96	91.790	ENSSPAG00000003858	cnot3a	98	92.588	Stegastes_partitus
ENSTRUG00000015732	cnot3a	68	90.164	ENSSSCG00000003264	CNOT3	84	90.461	Sus_scrofa
ENSTRUG00000015732	cnot3a	94	91.121	ENSTNIG00000008082	cnot3a	100	90.952	Tetraodon_nigroviridis
ENSTRUG00000015732	cnot3a	68	89.836	ENSUAMG00000005234	CNOT3	85	90.132	Ursus_americanus
ENSTRUG00000015732	cnot3a	60	88.489	ENSUMAG00000010934	CNOT3	89	92.017	Ursus_maritimus
ENSTRUG00000015732	cnot3a	68	90.164	ENSVVUG00000008239	CNOT3	83	90.461	Vulpes_vulpes
ENSTRUG00000015732	cnot3a	69	87.859	ENSXETG00000003166	cnot3	88	89.644	Xenopus_tropicalis
ENSTRUG00000015732	cnot3a	100	80.396	ENSXCOG00000019460	cnot3a	97	96.581	Xiphophorus_couchianus
ENSTRUG00000015732	cnot3a	100	85.525	ENSXMAG00000012273	cnot3a	100	85.083	Xiphophorus_maculatus