EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000015774 (Gene tree)
Gene ID: 101062638
Gene Symbol: rnaseh1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 4110 bases
Position: chr16:1066626-1070735
Accession: 101062638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000040305	RNase_H	PF00075.24	1.8e-41	1	1
ENSTRUP00000047942	RNase_H	PF00075.24	2.2e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000052083	-	1740	-	ENSTRUP00000047942	300 (aa)	-	-
ENSTRUT00000040447	-	1838	XM_011611756	ENSTRUP00000040305	279 (aa)	XP_011610058	H2UTN1

Gene Model

Click here to download ENSTRUG00000015774's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000015774's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000015774	rnaseh1	96	53.676	ENSG00000171865	RNASEH1	98	51.701	Homo_sapiens
ENSTRUG00000015774	rnaseh1	99	74.729	ENSAPOG00000000412	rnaseh1	98	73.559	Acanthochromis_polyacanthus
ENSTRUG00000015774	rnaseh1	96	52.788	ENSAMEG00000018433	RNASEH1	98	50.342	Ailuropoda_melanoleuca
ENSTRUG00000015774	rnaseh1	97	76.471	ENSACIG00000014666	rnaseh1	95	74.483	Amphilophus_citrinellus
ENSTRUG00000015774	rnaseh1	99	75.725	ENSAOCG00000015210	rnaseh1	98	74.490	Amphiprion_ocellaris
ENSTRUG00000015774	rnaseh1	99	76.449	ENSAPEG00000014104	rnaseh1	98	75.170	Amphiprion_percula
ENSTRUG00000015774	rnaseh1	100	74.733	ENSATEG00000000598	rnaseh1	99	74.733	Anabas_testudineus
ENSTRUG00000015774	rnaseh1	91	54.406	ENSAPLG00000001961	RNASEH1	100	54.406	Anas_platyrhynchos
ENSTRUG00000015774	rnaseh1	95	47.973	ENSACAG00000016857	rnaseh1	91	47.973	Anolis_carolinensis
ENSTRUG00000015774	rnaseh1	96	54.044	ENSANAG00000024055	RNASEH1	94	53.191	Aotus_nancymaae
ENSTRUG00000015774	rnaseh1	97	75.269	ENSACLG00000006741	rnaseh1	95	73.737	Astatotilapia_calliptera
ENSTRUG00000015774	rnaseh1	97	54.513	ENSAMXG00000042940	rnaseh1	98	54.513	Astyanax_mexicanus
ENSTRUG00000015774	rnaseh1	96	55.597	ENSBTAG00000016235	RNASEH1	92	54.874	Bos_taurus
ENSTRUG00000015774	rnaseh1	96	35.316	WBGene00004382	rnh-1.0	97	35.316	Caenorhabditis_elegans
ENSTRUG00000015774	rnaseh1	96	52.536	ENSCJAG00000035450	RNASEH1	91	52.536	Callithrix_jacchus
ENSTRUG00000015774	rnaseh1	96	54.074	ENSCAFG00000003259	RNASEH1	98	52.560	Canis_familiaris
ENSTRUG00000015774	rnaseh1	55	64.052	ENSCAFG00020004994	RNASEH1	99	64.052	Canis_lupus_dingo
ENSTRUG00000015774	rnaseh1	96	56.134	ENSCHIG00000022264	-	93	54.839	Capra_hircus
ENSTRUG00000015774	rnaseh1	88	45.382	ENSCHIG00000022230	-	99	45.382	Capra_hircus
ENSTRUG00000015774	rnaseh1	96	53.333	ENSTSYG00000012926	RNASEH1	99	50.508	Carlito_syrichta
ENSTRUG00000015774	rnaseh1	90	54.365	ENSCAPG00000004813	RNASEH1	99	54.365	Cavia_aperea
ENSTRUG00000015774	rnaseh1	98	54.015	ENSCPOG00000022278	Rnaseh1	97	51.689	Cavia_porcellus
ENSTRUG00000015774	rnaseh1	96	52.747	ENSCCAG00000038017	RNASEH1	94	51.943	Cebus_capucinus
ENSTRUG00000015774	rnaseh1	96	52.941	ENSCATG00000016515	-	91	52.941	Cercocebus_atys
ENSTRUG00000015774	rnaseh1	96	47.015	ENSCATG00000016818	-	90	47.015	Cercocebus_atys
ENSTRUG00000015774	rnaseh1	96	53.114	ENSCLAG00000002440	RNASEH1	98	51.864	Chinchilla_lanigera
ENSTRUG00000015774	rnaseh1	96	52.941	ENSCSAG00000006943	RNASEH1	91	52.941	Chlorocebus_sabaeus
ENSTRUG00000015774	rnaseh1	63	62.147	ENSCHOG00000008547	RNASEH1	87	62.147	Choloepus_hoffmanni
ENSTRUG00000015774	rnaseh1	95	56.044	ENSCPBG00000021620	RNASEH1	99	56.044	Chrysemys_picta_bellii
ENSTRUG00000015774	rnaseh1	96	38.129	ENSCING00000014054	-	93	38.129	Ciona_intestinalis
ENSTRUG00000015774	rnaseh1	81	37.391	ENSCSAVG00000000009	-	96	37.391	Ciona_savignyi
ENSTRUG00000015774	rnaseh1	96	53.309	ENSCANG00000037763	RNASEH1	91	53.309	Colobus_angolensis_palliatus
ENSTRUG00000015774	rnaseh1	95	52.830	ENSCGRG00001008950	Rnaseh1	97	51.399	Cricetulus_griseus_chok1gshd
ENSTRUG00000015774	rnaseh1	95	52.830	ENSCGRG00000006029	Rnaseh1	97	51.399	Cricetulus_griseus_crigri
ENSTRUG00000015774	rnaseh1	97	65.591	ENSCSEG00000005741	rnaseh1	95	66.547	Cynoglossus_semilaevis
ENSTRUG00000015774	rnaseh1	99	73.818	ENSCVAG00000018717	rnaseh1	95	72.474	Cyprinodon_variegatus
ENSTRUG00000015774	rnaseh1	97	63.177	ENSDARG00000042571	rnaseh1	98	63.177	Danio_rerio
ENSTRUG00000015774	rnaseh1	95	54.682	ENSDNOG00000016056	RNASEH1	95	51.399	Dasypus_novemcinctus
ENSTRUG00000015774	rnaseh1	95	52.273	ENSDORG00000000704	Rnaseh1	96	51.228	Dipodomys_ordii
ENSTRUG00000015774	rnaseh1	94	40.138	FBgn0023171	rnh1	92	40.138	Drosophila_melanogaster
ENSTRUG00000015774	rnaseh1	96	52.045	ENSETEG00000012674	RNASEH1	94	50.704	Echinops_telfairi
ENSTRUG00000015774	rnaseh1	96	44.444	ENSEBUG00000006116	rnaseh1	79	44.444	Eptatretus_burgeri
ENSTRUG00000015774	rnaseh1	95	46.021	ENSEBUG00000008898	rnaseh1	98	46.021	Eptatretus_burgeri
ENSTRUG00000015774	rnaseh1	96	57.565	ENSEASG00005022200	RNASEH1	92	56.584	Equus_asinus_asinus
ENSTRUG00000015774	rnaseh1	96	57.565	ENSECAG00000020695	RNASEH1	92	56.584	Equus_caballus
ENSTRUG00000015774	rnaseh1	97	68.705	ENSELUG00000010112	rnaseh1	98	65.541	Esox_lucius
ENSTRUG00000015774	rnaseh1	96	55.720	ENSFCAG00000025832	RNASEH1	98	54.082	Felis_catus
ENSTRUG00000015774	rnaseh1	97	55.052	ENSFALG00000002069	RNASEH1	94	54.704	Ficedula_albicollis
ENSTRUG00000015774	rnaseh1	96	53.160	ENSFDAG00000002035	RNASEH1	87	51.724	Fukomys_damarensis
ENSTRUG00000015774	rnaseh1	97	68.382	ENSGMOG00000013818	rnaseh1	95	68.070	Gadus_morhua
ENSTRUG00000015774	rnaseh1	96	55.839	ENSGALG00000016389	RNASEH1	93	55.839	Gallus_gallus
ENSTRUG00000015774	rnaseh1	96	72.119	ENSGAFG00000001776	rnaseh1	95	70.819	Gambusia_affinis
ENSTRUG00000015774	rnaseh1	97	74.170	ENSGACG00000011935	rnaseh1	94	74.021	Gasterosteus_aculeatus
ENSTRUG00000015774	rnaseh1	95	54.380	ENSGAGG00000009150	RNASEH1	61	55.474	Gopherus_agassizii
ENSTRUG00000015774	rnaseh1	96	53.309	ENSGGOG00000034822	RNASEH1	91	53.309	Gorilla_gorilla
ENSTRUG00000015774	rnaseh1	99	74.912	ENSHBUG00000004666	rnaseh1	96	73.422	Haplochromis_burtoni
ENSTRUG00000015774	rnaseh1	96	52.788	ENSHGLG00000002585	Rnaseh1	90	51.034	Heterocephalus_glaber_female
ENSTRUG00000015774	rnaseh1	96	52.788	ENSHGLG00100005105	Rnaseh1	90	51.034	Heterocephalus_glaber_male
ENSTRUG00000015774	rnaseh1	97	69.314	ENSHCOG00000012329	rnaseh1	93	70.383	Hippocampus_comes
ENSTRUG00000015774	rnaseh1	97	60.517	ENSIPUG00000023060	rnaseh1	98	60.517	Ictalurus_punctatus
ENSTRUG00000015774	rnaseh1	95	54.074	ENSSTOG00000012774	RNASEH1	98	52.577	Ictidomys_tridecemlineatus
ENSTRUG00000015774	rnaseh1	96	49.630	ENSJJAG00000021481	-	99	47.297	Jaculus_jaculus
ENSTRUG00000015774	rnaseh1	86	52.675	ENSJJAG00000020238	Rnaseh1	94	50.965	Jaculus_jaculus
ENSTRUG00000015774	rnaseh1	97	42.466	ENSJJAG00000008994	-	99	42.466	Jaculus_jaculus
ENSTRUG00000015774	rnaseh1	99	70.036	ENSKMAG00000001373	rnaseh1	97	67.123	Kryptolebias_marmoratus
ENSTRUG00000015774	rnaseh1	97	72.426	ENSLBEG00000004480	rnaseh1	97	72.426	Labrus_bergylta
ENSTRUG00000015774	rnaseh1	98	53.025	ENSLACG00000007100	RNASEH1	91	54.965	Latimeria_chalumnae
ENSTRUG00000015774	rnaseh1	97	58.929	ENSLOCG00000017212	rnaseh1	99	59.286	Lepisosteus_oculatus
ENSTRUG00000015774	rnaseh1	96	55.185	ENSLAFG00000015091	RNASEH1	91	55.185	Loxodonta_africana
ENSTRUG00000015774	rnaseh1	96	52.941	ENSMFAG00000000063	-	98	51.027	Macaca_fascicularis
ENSTRUG00000015774	rnaseh1	96	49.627	ENSMFAG00000002323	-	90	49.627	Macaca_fascicularis
ENSTRUG00000015774	rnaseh1	96	49.627	ENSMMUG00000019280	-	90	49.627	Macaca_mulatta
ENSTRUG00000015774	rnaseh1	96	52.941	ENSMNEG00000040183	-	98	51.027	Macaca_nemestrina
ENSTRUG00000015774	rnaseh1	96	49.254	ENSMNEG00000029676	-	90	49.254	Macaca_nemestrina
ENSTRUG00000015774	rnaseh1	90	52.157	ENSMLEG00000039352	-	99	52.157	Mandrillus_leucophaeus
ENSTRUG00000015774	rnaseh1	96	51.119	ENSMLEG00000028662	-	90	51.119	Mandrillus_leucophaeus
ENSTRUG00000015774	rnaseh1	99	71.480	ENSMAMG00000019725	rnaseh1	98	71.480	Mastacembelus_armatus
ENSTRUG00000015774	rnaseh1	97	75.269	ENSMZEG00005013006	rnaseh1	95	73.737	Maylandia_zebra
ENSTRUG00000015774	rnaseh1	85	55.285	ENSMGAG00000013979	RNASEH1	99	55.285	Meleagris_gallopavo
ENSTRUG00000015774	rnaseh1	96	53.358	ENSMAUG00000014957	Rnaseh1	99	50.680	Mesocricetus_auratus
ENSTRUG00000015774	rnaseh1	96	54.244	ENSMICG00000033156	RNASEH1	97	52.218	Microcebus_murinus
ENSTRUG00000015774	rnaseh1	96	52.985	ENSMOCG00000015522	Rnaseh1	98	50.345	Microtus_ochrogaster
ENSTRUG00000015774	rnaseh1	99	74.643	ENSMMOG00000015902	rnaseh1	97	73.826	Mola_mola
ENSTRUG00000015774	rnaseh1	84	48.729	ENSMODG00000028814	-	91	50.420	Monodelphis_domestica
ENSTRUG00000015774	rnaseh1	96	55.762	ENSMODG00000014491	-	90	55.762	Monodelphis_domestica
ENSTRUG00000015774	rnaseh1	99	73.214	ENSMALG00000010565	rnaseh1	95	72.664	Monopterus_albus
ENSTRUG00000015774	rnaseh1	96	53.650	MGP_CAROLIEiJ_G0017660	Rnaseh1	98	51.351	Mus_caroli
ENSTRUG00000015774	rnaseh1	96	54.015	ENSMUSG00000020630	Rnaseh1	98	51.689	Mus_musculus
ENSTRUG00000015774	rnaseh1	96	53.137	MGP_PahariEiJ_G0029418	Rnaseh1	99	51.515	Mus_pahari
ENSTRUG00000015774	rnaseh1	96	52.941	MGP_SPRETEiJ_G0018502	Rnaseh1	98	50.680	Mus_spretus
ENSTRUG00000015774	rnaseh1	66	58.602	ENSMPUG00000012984	RNASEH1	90	58.602	Mustela_putorius_furo
ENSTRUG00000015774	rnaseh1	96	54.613	ENSNGAG00000015966	Rnaseh1	92	52.381	Nannospalax_galili
ENSTRUG00000015774	rnaseh1	97	75.269	ENSNBRG00000008739	rnaseh1	95	73.737	Neolamprologus_brichardi
ENSTRUG00000015774	rnaseh1	96	46.350	ENSNLEG00000015400	RNASEH1	98	44.932	Nomascus_leucogenys
ENSTRUG00000015774	rnaseh1	87	48.387	ENSNLEG00000000059	-	88	48.387	Nomascus_leucogenys
ENSTRUG00000015774	rnaseh1	95	38.346	ENSMEUG00000003610	-	90	38.346	Notamacropus_eugenii
ENSTRUG00000015774	rnaseh1	96	54.851	ENSOPRG00000005072	RNASEH1	90	54.851	Ochotona_princeps
ENSTRUG00000015774	rnaseh1	97	56.044	ENSODEG00000000235	Rnaseh1	96	54.576	Octodon_degus
ENSTRUG00000015774	rnaseh1	97	75.357	ENSONIG00000018697	rnaseh1	99	75.357	Oreochromis_niloticus
ENSTRUG00000015774	rnaseh1	96	52.747	ENSOCUG00000006117	RNASEH1	93	51.399	Oryctolagus_cuniculus
ENSTRUG00000015774	rnaseh1	97	74.725	ENSORLG00000018127	rnaseh1	97	74.725	Oryzias_latipes
ENSTRUG00000015774	rnaseh1	99	73.741	ENSORLG00020013660	rnaseh1	93	73.592	Oryzias_latipes_hni
ENSTRUG00000015774	rnaseh1	99	74.101	ENSORLG00015011338	rnaseh1	93	73.944	Oryzias_latipes_hsok
ENSTRUG00000015774	rnaseh1	89	70.040	ENSOMEG00000004710	rnaseh1	98	68.821	Oryzias_melastigma
ENSTRUG00000015774	rnaseh1	95	54.982	ENSOGAG00000017176	RNASEH1	97	52.901	Otolemur_garnettii
ENSTRUG00000015774	rnaseh1	96	48.921	ENSOARG00000005386	RNASEH1	90	48.921	Ovis_aries
ENSTRUG00000015774	rnaseh1	96	53.676	ENSPPAG00000034221	RNASEH1	98	51.701	Pan_paniscus
ENSTRUG00000015774	rnaseh1	96	55.351	ENSPPRG00000015513	RNASEH1	98	53.741	Panthera_pardus
ENSTRUG00000015774	rnaseh1	90	53.937	ENSPTIG00000019034	RNASEH1	84	53.937	Panthera_tigris_altaica
ENSTRUG00000015774	rnaseh1	88	48.221	ENSPTRG00000043403	-	91	48.221	Pan_troglodytes
ENSTRUG00000015774	rnaseh1	96	53.676	ENSPTRG00000011614	RNASEH1	98	51.701	Pan_troglodytes
ENSTRUG00000015774	rnaseh1	96	52.190	ENSPANG00000000443	RNASEH1	99	51.938	Papio_anubis
ENSTRUG00000015774	rnaseh1	96	48.134	ENSPANG00000018246	-	90	48.134	Papio_anubis
ENSTRUG00000015774	rnaseh1	97	58.845	ENSPKIG00000003146	rnaseh1	99	60.886	Paramormyrops_kingsleyae
ENSTRUG00000015774	rnaseh1	95	52.555	ENSPSIG00000002937	RNASEH1	99	51.460	Pelodiscus_sinensis
ENSTRUG00000015774	rnaseh1	96	62.454	ENSPMGG00000017463	rnaseh1	96	61.786	Periophthalmus_magnuspinnatus
ENSTRUG00000015774	rnaseh1	96	51.673	ENSPEMG00000022465	-	94	50.871	Peromyscus_maniculatus_bairdii
ENSTRUG00000015774	rnaseh1	52	35.862	ENSPCIG00000026047	-	83	35.374	Phascolarctos_cinereus
ENSTRUG00000015774	rnaseh1	96	55.185	ENSPCIG00000023334	-	93	53.737	Phascolarctos_cinereus
ENSTRUG00000015774	rnaseh1	96	72.491	ENSPFOG00000002841	rnaseh1	95	70.819	Poecilia_formosa
ENSTRUG00000015774	rnaseh1	82	52.632	ENSPLAG00000021349	-	88	52.632	Poecilia_latipinna
ENSTRUG00000015774	rnaseh1	96	72.491	ENSPMEG00000016826	rnaseh1	95	70.819	Poecilia_mexicana
ENSTRUG00000015774	rnaseh1	96	71.739	ENSPREG00000012197	rnaseh1	95	70.139	Poecilia_reticulata
ENSTRUG00000015774	rnaseh1	96	44.118	ENSPPYG00000025873	RNASEH1	98	43.197	Pongo_abelii
ENSTRUG00000015774	rnaseh1	87	48.583	ENSPPYG00000008067	-	90	48.583	Pongo_abelii
ENSTRUG00000015774	rnaseh1	96	54.044	ENSPCAG00000002500	RNASEH1	91	54.044	Procavia_capensis
ENSTRUG00000015774	rnaseh1	96	48.339	ENSPCOG00000019444	RNASEH1	98	46.758	Propithecus_coquereli
ENSTRUG00000015774	rnaseh1	96	51.111	ENSPVAG00000002070	RNASEH1	98	49.315	Pteropus_vampyrus
ENSTRUG00000015774	rnaseh1	97	74.910	ENSPNYG00000001292	rnaseh1	95	73.401	Pundamilia_nyererei
ENSTRUG00000015774	rnaseh1	97	64.748	ENSPNAG00000022344	rnaseh1	96	63.481	Pygocentrus_nattereri
ENSTRUG00000015774	rnaseh1	96	53.114	ENSRNOG00000008584	Rnaseh1	99	51.525	Rattus_norvegicus
ENSTRUG00000015774	rnaseh1	96	52.768	ENSRBIG00000034222	RNASEH1	97	50.859	Rhinopithecus_bieti
ENSTRUG00000015774	rnaseh1	96	52.768	ENSRROG00000041761	RNASEH1	97	50.859	Rhinopithecus_roxellana
ENSTRUG00000015774	rnaseh1	96	43.333	YMR234W	-	92	43.333	Saccharomyces_cerevisiae
ENSTRUG00000015774	rnaseh1	96	52.747	ENSSBOG00000025411	RNASEH1	91	52.747	Saimiri_boliviensis_boliviensis
ENSTRUG00000015774	rnaseh1	96	55.556	ENSSHAG00000013051	RNASEH1	88	55.556	Sarcophilus_harrisii
ENSTRUG00000015774	rnaseh1	97	60.440	ENSSFOG00015002709	rnaseh1	96	60.000	Scleropages_formosus
ENSTRUG00000015774	rnaseh1	99	74.460	ENSSMAG00000007586	rnaseh1	98	72.727	Scophthalmus_maximus
ENSTRUG00000015774	rnaseh1	100	75.986	ENSSDUG00000008217	rnaseh1	98	75.986	Seriola_dumerili
ENSTRUG00000015774	rnaseh1	91	74.409	ENSSLDG00000000442	rnaseh1	95	74.409	Seriola_lalandi_dorsalis
ENSTRUG00000015774	rnaseh1	96	52.330	ENSSPUG00000006644	RNASEH1	93	52.330	Sphenodon_punctatus
ENSTRUG00000015774	rnaseh1	99	75.000	ENSSPAG00000009353	rnaseh1	97	73.810	Stegastes_partitus
ENSTRUG00000015774	rnaseh1	96	55.311	ENSSSCG00000025305	RNASEH1	93	54.064	Sus_scrofa
ENSTRUG00000015774	rnaseh1	96	54.895	ENSTGUG00000012980	RNASEH1	93	55.914	Taeniopygia_guttata
ENSTRUG00000015774	rnaseh1	99	84.892	ENSTNIG00000010715	rnaseh1	99	84.892	Tetraodon_nigroviridis
ENSTRUG00000015774	rnaseh1	96	53.137	ENSTTRG00000001615	RNASEH1	90	53.137	Tursiops_truncatus
ENSTRUG00000015774	rnaseh1	53	65.101	ENSUAMG00000018254	RNASEH1	77	65.101	Ursus_americanus
ENSTRUG00000015774	rnaseh1	74	53.846	ENSUMAG00000003941	RNASEH1	65	53.846	Ursus_maritimus
ENSTRUG00000015774	rnaseh1	96	46.667	ENSVPAG00000011589	RNASEH1	98	45.051	Vicugna_pacos
ENSTRUG00000015774	rnaseh1	96	53.532	ENSVVUG00000008633	RNASEH1	88	52.055	Vulpes_vulpes
ENSTRUG00000015774	rnaseh1	95	37.879	ENSXETG00000030371	-	99	37.879	Xenopus_tropicalis
ENSTRUG00000015774	rnaseh1	96	57.299	ENSXETG00000001212	rnaseh1	96	56.098	Xenopus_tropicalis
ENSTRUG00000015774	rnaseh1	96	71.375	ENSXMAG00000002357	rnaseh1	95	70.107	Xiphophorus_maculatus