EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000015880 (Gene tree)
Gene ID: -
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H and coiled-coil domain-containing protein 1-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 1695 bases
Position: chr19:11054384-11056078
Accession: 101070610
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000040599	R3H	PF01424.22	6.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000040741	-	1146	XM_003973602	ENSTRUP00000040599	381 (aa)	XP_003973651	H2UUH4

Gene Model

Click here to download ENSTRUG00000015880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000015880's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000015880	r3hcc1	98	32.326	ENSG00000104679	R3HCC1	95	32.326	Homo_sapiens
ENSTRUG00000015880	r3hcc1	99	49.761	ENSAPOG00000003616	r3hcc1	93	50.239	Acanthochromis_polyacanthus
ENSTRUG00000015880	r3hcc1	98	32.311	ENSAMEG00000002963	R3HCC1	87	32.783	Ailuropoda_melanoleuca
ENSTRUG00000015880	r3hcc1	99	45.309	ENSACIG00000017144	r3hcc1	93	54.730	Amphilophus_citrinellus
ENSTRUG00000015880	r3hcc1	99	49.038	ENSAOCG00000003945	r3hcc1	99	52.771	Amphiprion_ocellaris
ENSTRUG00000015880	r3hcc1	99	49.519	ENSAPEG00000003613	r3hcc1	99	52.038	Amphiprion_percula
ENSTRUG00000015880	r3hcc1	95	51.861	ENSATEG00000023860	r3hcc1	100	53.980	Anabas_testudineus
ENSTRUG00000015880	r3hcc1	97	33.179	ENSACAG00000016627	R3HCC1	94	33.718	Anolis_carolinensis
ENSTRUG00000015880	r3hcc1	98	31.830	ENSANAG00000036169	R3HCC1	95	32.419	Aotus_nancymaae
ENSTRUG00000015880	r3hcc1	98	31.336	ENSBTAG00000025830	R3HCC1	92	31.336	Bos_taurus
ENSTRUG00000015880	r3hcc1	98	32.905	ENSCJAG00000020118	R3HCC1	95	32.905	Callithrix_jacchus
ENSTRUG00000015880	r3hcc1	98	33.726	ENSCAFG00000009210	R3HCC1	91	33.095	Canis_familiaris
ENSTRUG00000015880	r3hcc1	81	31.638	ENSCAFG00020012870	R3HCC1	82	31.054	Canis_lupus_dingo
ENSTRUG00000015880	r3hcc1	98	31.724	ENSCHIG00000009107	R3HCC1	95	31.724	Capra_hircus
ENSTRUG00000015880	r3hcc1	98	32.084	ENSTSYG00000000511	R3HCC1	74	32.477	Carlito_syrichta
ENSTRUG00000015880	r3hcc1	64	35.294	ENSCAPG00000015813	R3HCC1	56	35.294	Cavia_aperea
ENSTRUG00000015880	r3hcc1	72	42.647	ENSCPOG00000009696	R3HCC1	60	42.647	Cavia_porcellus
ENSTRUG00000015880	r3hcc1	98	31.105	ENSCCAG00000037811	R3HCC1	95	32.412	Cebus_capucinus
ENSTRUG00000015880	r3hcc1	98	33.163	ENSCATG00000032971	R3HCC1	95	32.391	Cercocebus_atys
ENSTRUG00000015880	r3hcc1	98	35.059	ENSCLAG00000015556	R3HCC1	80	35.059	Chinchilla_lanigera
ENSTRUG00000015880	r3hcc1	74	39.506	ENSCSAG00000016250	R3HCC1	87	31.765	Chlorocebus_sabaeus
ENSTRUG00000015880	r3hcc1	98	32.192	ENSCHOG00000000396	R3HCC1	92	32.420	Choloepus_hoffmanni
ENSTRUG00000015880	r3hcc1	98	33.161	ENSCANG00000029441	R3HCC1	95	33.161	Colobus_angolensis_palliatus
ENSTRUG00000015880	r3hcc1	66	41.667	ENSCGRG00001014977	R3hcc1	56	41.667	Cricetulus_griseus_chok1gshd
ENSTRUG00000015880	r3hcc1	66	41.667	ENSCGRG00000004454	R3hcc1	56	41.667	Cricetulus_griseus_crigri
ENSTRUG00000015880	r3hcc1	98	48.309	ENSCSEG00000005748	r3hcc1	99	48.309	Cynoglossus_semilaevis
ENSTRUG00000015880	r3hcc1	83	44.382	ENSCVAG00000002640	r3hcc1	95	44.382	Cyprinodon_variegatus
ENSTRUG00000015880	r3hcc1	99	39.098	ENSDARG00000099593	r3hcc1	96	40.464	Danio_rerio
ENSTRUG00000015880	r3hcc1	98	32.168	ENSDNOG00000007168	R3HCC1	88	32.093	Dasypus_novemcinctus
ENSTRUG00000015880	r3hcc1	94	40.964	ENSDORG00000026365	R3hcc1	76	40.964	Dipodomys_ordii
ENSTRUG00000015880	r3hcc1	98	31.640	ENSEASG00005018782	R3HCC1	77	32.339	Equus_asinus_asinus
ENSTRUG00000015880	r3hcc1	98	31.640	ENSECAG00000025013	R3HCC1	93	31.640	Equus_caballus
ENSTRUG00000015880	r3hcc1	98	32.710	ENSEEUG00000011918	R3HCC1	92	32.243	Erinaceus_europaeus
ENSTRUG00000015880	r3hcc1	97	42.482	ENSELUG00000023650	r3hcc1	99	43.627	Esox_lucius
ENSTRUG00000015880	r3hcc1	98	35.013	ENSFCAG00000012395	R3HCC1	92	33.875	Felis_catus
ENSTRUG00000015880	r3hcc1	79	33.784	ENSFALG00000001646	R3HCC1	53	33.784	Ficedula_albicollis
ENSTRUG00000015880	r3hcc1	92	41.912	ENSFDAG00000001572	R3HCC1	96	30.631	Fukomys_damarensis
ENSTRUG00000015880	r3hcc1	94	37.433	ENSGMOG00000017590	-	95	37.433	Gadus_morhua
ENSTRUG00000015880	r3hcc1	99	48.284	ENSGAFG00000008747	-	93	48.421	Gambusia_affinis
ENSTRUG00000015880	r3hcc1	97	52.130	ENSGACG00000008447	r3hcc1	93	52.130	Gasterosteus_aculeatus
ENSTRUG00000015880	r3hcc1	98	32.041	ENSGGOG00000013817	R3HCC1	95	32.817	Gorilla_gorilla
ENSTRUG00000015880	r3hcc1	57	73.103	ENSHBUG00000022250	-	97	49.737	Haplochromis_burtoni
ENSTRUG00000015880	r3hcc1	98	31.364	ENSHGLG00000010517	R3HCC1	88	31.808	Heterocephalus_glaber_female
ENSTRUG00000015880	r3hcc1	98	31.364	ENSHGLG00100006388	R3HCC1	88	31.808	Heterocephalus_glaber_male
ENSTRUG00000015880	r3hcc1	96	49.600	ENSHCOG00000011745	r3hcc1	91	49.869	Hippocampus_comes
ENSTRUG00000015880	r3hcc1	97	42.750	ENSIPUG00000024504	r3hcc1	84	43.147	Ictalurus_punctatus
ENSTRUG00000015880	r3hcc1	74	42.236	ENSSTOG00000027130	R3HCC1	63	42.236	Ictidomys_tridecemlineatus
ENSTRUG00000015880	r3hcc1	66	44.697	ENSJJAG00000013075	R3hcc1	58	44.697	Jaculus_jaculus
ENSTRUG00000015880	r3hcc1	95	47.250	ENSKMAG00000000286	r3hcc1	100	48.371	Kryptolebias_marmoratus
ENSTRUG00000015880	r3hcc1	98	34.112	ENSLACG00000011894	R3HCC1	96	34.112	Latimeria_chalumnae
ENSTRUG00000015880	r3hcc1	97	44.301	ENSLOCG00000015442	r3hcc1	99	44.301	Lepisosteus_oculatus
ENSTRUG00000015880	r3hcc1	73	43.382	ENSLAFG00000016137	R3HCC1	58	43.382	Loxodonta_africana
ENSTRUG00000015880	r3hcc1	98	32.558	ENSMFAG00000032894	R3HCC1	95	31.620	Macaca_fascicularis
ENSTRUG00000015880	r3hcc1	98	31.899	ENSMMUG00000016655	R3HCC1	95	30.982	Macaca_mulatta
ENSTRUG00000015880	r3hcc1	98	31.877	ENSMNEG00000043283	R3HCC1	95	31.877	Macaca_nemestrina
ENSTRUG00000015880	r3hcc1	98	32.821	ENSMLEG00000030147	R3HCC1	95	32.391	Mandrillus_leucophaeus
ENSTRUG00000015880	r3hcc1	95	52.250	ENSMAMG00000018146	r3hcc1	100	51.750	Mastacembelus_armatus
ENSTRUG00000015880	r3hcc1	68	44.118	ENSMGAG00000001356	R3HCC1	57	44.118	Meleagris_gallopavo
ENSTRUG00000015880	r3hcc1	66	42.424	ENSMAUG00000016096	R3hcc1	63	39.286	Mesocricetus_auratus
ENSTRUG00000015880	r3hcc1	98	32.412	ENSMICG00000011146	R3HCC1	95	33.582	Microcebus_murinus
ENSTRUG00000015880	r3hcc1	68	42.647	ENSMOCG00000018508	R3hcc1	57	42.647	Microtus_ochrogaster
ENSTRUG00000015880	r3hcc1	70	32.343	ENSMODG00000016809	-	69	32.776	Monodelphis_domestica
ENSTRUG00000015880	r3hcc1	95	51.768	ENSMALG00000000731	r3hcc1	100	53.030	Monopterus_albus
ENSTRUG00000015880	r3hcc1	85	41.667	MGP_CAROLIEiJ_G0019467	R3hcc1	74	38.182	Mus_caroli
ENSTRUG00000015880	r3hcc1	66	41.667	ENSMUSG00000034194	R3hcc1	61	37.805	Mus_musculus
ENSTRUG00000015880	r3hcc1	66	41.667	MGP_PahariEiJ_G0030484	R3hcc1	61	38.554	Mus_pahari
ENSTRUG00000015880	r3hcc1	66	41.667	MGP_SPRETEiJ_G0020359	R3hcc1	60	37.805	Mus_spretus
ENSTRUG00000015880	r3hcc1	98	33.333	ENSMPUG00000003457	R3HCC1	83	33.565	Mustela_putorius_furo
ENSTRUG00000015880	r3hcc1	97	32.944	ENSMLUG00000000266	R3HCC1	87	33.721	Myotis_lucifugus
ENSTRUG00000015880	r3hcc1	66	43.939	ENSNGAG00000016747	R3hcc1	95	31.293	Nannospalax_galili
ENSTRUG00000015880	r3hcc1	75	38.585	ENSNBRG00000016975	-	72	38.585	Neolamprologus_brichardi
ENSTRUG00000015880	r3hcc1	97	33.254	ENSMEUG00000010587	R3HCC1	94	33.492	Notamacropus_eugenii
ENSTRUG00000015880	r3hcc1	97	31.415	ENSOPRG00000013390	R3HCC1	90	33.173	Ochotona_princeps
ENSTRUG00000015880	r3hcc1	98	32.088	ENSODEG00000007529	R3HCC1	96	32.159	Octodon_degus
ENSTRUG00000015880	r3hcc1	98	31.429	ENSOANG00000013877	R3HCC1	93	32.143	Ornithorhynchus_anatinus
ENSTRUG00000015880	r3hcc1	96	32.850	ENSOCUG00000023554	R3HCC1	80	33.659	Oryctolagus_cuniculus
ENSTRUG00000015880	r3hcc1	95	47.150	ENSORLG00000016816	r3hcc1	100	47.409	Oryzias_latipes
ENSTRUG00000015880	r3hcc1	95	47.074	ENSORLG00020012005	r3hcc1	100	47.074	Oryzias_latipes_hni
ENSTRUG00000015880	r3hcc1	95	47.287	ENSORLG00015007018	r3hcc1	100	47.545	Oryzias_latipes_hsok
ENSTRUG00000015880	r3hcc1	95	44.675	ENSOMEG00000000816	r3hcc1	100	44.675	Oryzias_melastigma
ENSTRUG00000015880	r3hcc1	68	42.647	ENSOGAG00000001291	R3HCC1	88	33.097	Otolemur_garnettii
ENSTRUG00000015880	r3hcc1	98	30.947	ENSOARG00000010146	R3HCC1	93	30.947	Ovis_aries
ENSTRUG00000015880	r3hcc1	98	31.469	ENSPPAG00000033165	R3HCC1	95	31.690	Pan_paniscus
ENSTRUG00000015880	r3hcc1	98	34.107	ENSPPRG00000002522	R3HCC1	96	33.875	Panthera_pardus
ENSTRUG00000015880	r3hcc1	91	34.491	ENSPTIG00000011230	R3HCC1	93	34.243	Panthera_tigris_altaica
ENSTRUG00000015880	r3hcc1	98	31.628	ENSPTRG00000020076	R3HCC1	95	30.467	Pan_troglodytes
ENSTRUG00000015880	r3hcc1	98	33.075	ENSPANG00000000453	R3HCC1	95	32.134	Papio_anubis
ENSTRUG00000015880	r3hcc1	90	42.781	ENSPKIG00000014426	-	94	42.781	Paramormyrops_kingsleyae
ENSTRUG00000015880	r3hcc1	90	41.689	ENSPKIG00000020397	-	94	41.689	Paramormyrops_kingsleyae
ENSTRUG00000015880	r3hcc1	98	34.483	ENSPSIG00000017664	R3HCC1	95	34.483	Pelodiscus_sinensis
ENSTRUG00000015880	r3hcc1	70	41.892	ENSPEMG00000007118	R3hcc1	59	41.892	Peromyscus_maniculatus_bairdii
ENSTRUG00000015880	r3hcc1	55	50.000	ENSPCIG00000022718	-	83	31.707	Phascolarctos_cinereus
ENSTRUG00000015880	r3hcc1	99	50.123	ENSPFOG00000022301	r3hcc1	90	50.123	Poecilia_formosa
ENSTRUG00000015880	r3hcc1	99	49.633	ENSPLAG00000010794	r3hcc1	90	50.122	Poecilia_latipinna
ENSTRUG00000015880	r3hcc1	99	50.123	ENSPMEG00000022515	r3hcc1	90	50.123	Poecilia_mexicana
ENSTRUG00000015880	r3hcc1	99	49.389	ENSPREG00000000713	r3hcc1	90	49.878	Poecilia_reticulata
ENSTRUG00000015880	r3hcc1	67	40.541	ENSPPYG00000018436	R3HCC1	68	40.541	Pongo_abelii
ENSTRUG00000015880	r3hcc1	67	42.647	ENSPCAG00000012229	R3HCC1	60	42.647	Procavia_capensis
ENSTRUG00000015880	r3hcc1	98	33.021	ENSPCOG00000027554	R3HCC1	95	33.724	Propithecus_coquereli
ENSTRUG00000015880	r3hcc1	98	32.710	ENSPVAG00000009829	R3HCC1	92	33.178	Pteropus_vampyrus
ENSTRUG00000015880	r3hcc1	94	42.896	ENSPNAG00000023875	r3hcc1	98	43.514	Pygocentrus_nattereri
ENSTRUG00000015880	r3hcc1	75	38.922	ENSRNOG00000016777	AABR07018321.1	51	38.596	Rattus_norvegicus
ENSTRUG00000015880	r3hcc1	98	33.075	ENSRBIG00000028045	R3HCC1	95	33.162	Rhinopithecus_bieti
ENSTRUG00000015880	r3hcc1	98	33.075	ENSRROG00000031126	R3HCC1	95	33.162	Rhinopithecus_roxellana
ENSTRUG00000015880	r3hcc1	98	31.850	ENSSBOG00000022590	R3HCC1	95	32.787	Saimiri_boliviensis_boliviensis
ENSTRUG00000015880	r3hcc1	99	37.469	ENSSFOG00015013507	r3hcc1	99	43.684	Scleropages_formosus
ENSTRUG00000015880	r3hcc1	95	53.415	ENSSMAG00000008647	r3hcc1	100	53.415	Scophthalmus_maximus
ENSTRUG00000015880	r3hcc1	99	54.306	ENSSDUG00000022786	r3hcc1	97	54.785	Seriola_dumerili
ENSTRUG00000015880	r3hcc1	99	54.067	ENSSLDG00000019031	r3hcc1	97	54.545	Seriola_lalandi_dorsalis
ENSTRUG00000015880	r3hcc1	99	52.300	ENSSPAG00000013497	r3hcc1	99	52.300	Stegastes_partitus
ENSTRUG00000015880	r3hcc1	98	32.394	ENSSSCG00000039915	-	89	32.506	Sus_scrofa
ENSTRUG00000015880	r3hcc1	98	30.310	ENSSSCG00000037347	-	86	31.043	Sus_scrofa
ENSTRUG00000015880	r3hcc1	98	30.353	ENSTTRG00000012247	R3HCC1	92	30.751	Tursiops_truncatus
ENSTRUG00000015880	r3hcc1	98	31.591	ENSUAMG00000007344	R3HCC1	95	31.829	Ursus_americanus
ENSTRUG00000015880	r3hcc1	98	32.220	ENSVVUG00000005056	R3HCC1	91	32.857	Vulpes_vulpes
ENSTRUG00000015880	r3hcc1	92	48.800	ENSXCOG00000017626	r3hcc1	86	50.000	Xiphophorus_couchianus
ENSTRUG00000015880	r3hcc1	99	49.510	ENSXMAG00000018375	r3hcc1	93	50.394	Xiphophorus_maculatus