EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000015905 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 12443 bases
Position: chrHE591744.1:273186-285628
Accession: 101061383
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000040667	Fox-1_C	PF12414.8	2.1e-33	1	1
ENSTRUP00000040667	RRM_1	PF00076.22	2.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000040809	-	1086	XM_003977641	ENSTRUP00000040667	362 (aa)	XP_003977690	H2UUP2

Gene Model

Click here to download ENSTRUG00000015905's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000015905's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000015905	rbfox1l	62	68.559	ENSTRUG00000004894	rbfox3b	64	67.241
ENSTRUG00000015905	rbfox1l	65	50.714	ENSTRUG00000007739	-	68	52.091
ENSTRUG00000015905	rbfox1l	77	59.786	ENSTRUG00000020940	rbfox1	92	52.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000015905	rbfox1l	100	85.405	ENSAPOG00000016304	rbfox1l	97	86.216	Acanthochromis_polyacanthus
ENSTRUG00000015905	rbfox1l	100	79.452	ENSACIG00000006441	rbfox1l	96	78.630	Amphilophus_citrinellus
ENSTRUG00000015905	rbfox1l	87	80.247	ENSAOCG00000020938	rbfox1l	95	80.495	Amphiprion_ocellaris
ENSTRUG00000015905	rbfox1l	100	84.865	ENSAPEG00000008232	rbfox1l	96	85.676	Amphiprion_percula
ENSTRUG00000015905	rbfox1l	100	85.792	ENSATEG00000022649	rbfox1l	96	84.658	Anabas_testudineus
ENSTRUG00000015905	rbfox1l	62	74.249	ENSACAG00000011931	-	85	74.678	Anolis_carolinensis
ENSTRUG00000015905	rbfox1l	100	84.054	ENSACLG00000021394	rbfox1l	96	83.784	Astatotilapia_calliptera
ENSTRUG00000015905	rbfox1l	100	84.011	ENSAMXG00000010470	rbfox1l	96	82.385	Astyanax_mexicanus
ENSTRUG00000015905	rbfox1l	99	53.243	ENSCPBG00000010944	-	96	57.182	Chrysemys_picta_bellii
ENSTRUG00000015905	rbfox1l	100	83.106	ENSCSEG00000018898	rbfox1l	96	86.104	Cynoglossus_semilaevis
ENSTRUG00000015905	rbfox1l	100	82.973	ENSCVAG00000007986	rbfox1l	96	82.432	Cyprinodon_variegatus
ENSTRUG00000015905	rbfox1l	100	79.133	ENSDARG00000021184	rbfox1l	96	79.404	Danio_rerio
ENSTRUG00000015905	rbfox1l	100	78.421	ENSELUG00000015077	rbfox1l	96	78.421	Esox_lucius
ENSTRUG00000015905	rbfox1l	100	69.688	ENSFHEG00000016557	rbfox1l	90	96.154	Fundulus_heteroclitus
ENSTRUG00000015905	rbfox1l	100	78.649	ENSGMOG00000005040	rbfox1l	96	78.378	Gadus_morhua
ENSTRUG00000015905	rbfox1l	92	81.525	ENSGAFG00000013211	rbfox1l	93	81.232	Gambusia_affinis
ENSTRUG00000015905	rbfox1l	100	85.676	ENSGACG00000010757	rbfox1l	96	85.405	Gasterosteus_aculeatus
ENSTRUG00000015905	rbfox1l	62	69.869	ENSGAGG00000012440	-	80	70.742	Gopherus_agassizii
ENSTRUG00000015905	rbfox1l	100	84.054	ENSHBUG00000013406	rbfox1l	96	83.784	Haplochromis_burtoni
ENSTRUG00000015905	rbfox1l	100	84.054	ENSHCOG00000020771	rbfox1l	96	84.324	Hippocampus_comes
ENSTRUG00000015905	rbfox1l	100	78.108	ENSIPUG00000000065	rbfox1l	95	78.006	Ictalurus_punctatus
ENSTRUG00000015905	rbfox1l	100	83.333	ENSKMAG00000005146	rbfox1l	96	82.796	Kryptolebias_marmoratus
ENSTRUG00000015905	rbfox1l	100	85.405	ENSLBEG00000017089	rbfox1l	96	86.757	Labrus_bergylta
ENSTRUG00000015905	rbfox1l	100	85.135	ENSMAMG00000019480	rbfox1l	96	86.486	Mastacembelus_armatus
ENSTRUG00000015905	rbfox1l	100	84.054	ENSMZEG00005016374	rbfox1l	96	83.784	Maylandia_zebra
ENSTRUG00000015905	rbfox1l	100	89.041	ENSMMOG00000016530	rbfox1l	96	89.041	Mola_mola
ENSTRUG00000015905	rbfox1l	100	83.333	ENSMALG00000009384	rbfox1l	96	84.699	Monopterus_albus
ENSTRUG00000015905	rbfox1l	100	85.014	ENSNBRG00000003346	rbfox1l	96	84.741	Neolamprologus_brichardi
ENSTRUG00000015905	rbfox1l	100	84.865	ENSONIG00000012754	rbfox1l	96	84.595	Oreochromis_niloticus
ENSTRUG00000015905	rbfox1l	100	84.324	ENSORLG00000011269	rbfox1l	96	85.135	Oryzias_latipes
ENSTRUG00000015905	rbfox1l	100	82.703	ENSORLG00020000162	rbfox1l	96	84.865	Oryzias_latipes_hni
ENSTRUG00000015905	rbfox1l	100	82.973	ENSORLG00015013464	rbfox1l	96	85.135	Oryzias_latipes_hsok
ENSTRUG00000015905	rbfox1l	100	83.243	ENSOMEG00000010584	rbfox1l	96	85.405	Oryzias_melastigma
ENSTRUG00000015905	rbfox1l	100	83.379	ENSPKIG00000012029	rbfox1l	96	82.016	Paramormyrops_kingsleyae
ENSTRUG00000015905	rbfox1l	100	76.164	ENSPMGG00000012082	rbfox1l	96	76.712	Periophthalmus_magnuspinnatus
ENSTRUG00000015905	rbfox1l	100	83.784	ENSPFOG00000009338	rbfox1l	96	83.514	Poecilia_formosa
ENSTRUG00000015905	rbfox1l	88	75.617	ENSPLAG00000012816	rbfox1l	98	75.309	Poecilia_latipinna
ENSTRUG00000015905	rbfox1l	100	79.730	ENSPMEG00000017597	rbfox1l	96	79.133	Poecilia_mexicana
ENSTRUG00000015905	rbfox1l	100	80.000	ENSPREG00000007940	rbfox1l	96	79.404	Poecilia_reticulata
ENSTRUG00000015905	rbfox1l	100	83.784	ENSPNYG00000002098	rbfox1l	96	83.514	Pundamilia_nyererei
ENSTRUG00000015905	rbfox1l	100	82.432	ENSPNAG00000001620	rbfox1l	96	80.811	Pygocentrus_nattereri
ENSTRUG00000015905	rbfox1l	100	79.620	ENSSFOG00015000675	rbfox1l	96	79.891	Scleropages_formosus
ENSTRUG00000015905	rbfox1l	100	85.135	ENSSMAG00000013090	rbfox1l	96	85.135	Scophthalmus_maximus
ENSTRUG00000015905	rbfox1l	100	83.333	ENSSDUG00000008705	rbfox1l	96	83.333	Seriola_dumerili
ENSTRUG00000015905	rbfox1l	100	83.333	ENSSLDG00000022256	rbfox1l	96	83.333	Seriola_lalandi_dorsalis
ENSTRUG00000015905	rbfox1l	100	84.865	ENSSPAG00000016620	rbfox1l	96	85.676	Stegastes_partitus
ENSTRUG00000015905	rbfox1l	63	86.454	ENSTNIG00000008088	rbfox1l	94	86.400	Tetraodon_nigroviridis
ENSTRUG00000015905	rbfox1l	100	83.784	ENSXMAG00000023471	rbfox1l	96	83.514	Xiphophorus_maculatus