EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000015906 (Gene tree)
Gene ID: 101075969
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 18216 bases
Position: chr11:3143123-3161338
Accession: 101075969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000040670	RRM_4	PF10598.9	2.7e-48	1	1
ENSTRUP00000040670	U5_2-snRNA_bdg	PF10597.9	6.2e-74	1	1
ENSTRUP00000040670	PRO8NT	PF08082.11	9.8e-87	1	1
ENSTRUP00000040670	U6-snRNA_bdg	PF10596.9	1.1e-89	1	1
ENSTRUP00000040670	PROCN	PF08083.11	2e-235	1	1
ENSTRUP00000040670	PRP8_domainIV	PF12134.8	3.7e-130	1	1
ENSTRUP00000040670	PROCT	PF08084.11	4.1e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000040812	-	12433	XM_003968376	ENSTRUP00000040670	2338 (aa)	XP_003968425	H2UUP5

Gene Model

Click here to download ENSTRUG00000015906's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000015906's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000015906	prpf8	100	97.563	ENSG00000174231	PRPF8	100	97.563	Homo_sapiens
ENSTRUG00000015906	prpf8	100	99.145	ENSAPOG00000010079	prpf8	100	99.145	Acanthochromis_polyacanthus
ENSTRUG00000015906	prpf8	100	97.563	ENSAMEG00000007940	PRPF8	100	97.563	Ailuropoda_melanoleuca
ENSTRUG00000015906	prpf8	100	97.028	ENSACIG00000018280	prpf8	100	97.028	Amphilophus_citrinellus
ENSTRUG00000015906	prpf8	100	99.102	ENSAOCG00000010725	prpf8	100	99.102	Amphiprion_ocellaris
ENSTRUG00000015906	prpf8	100	99.102	ENSAPEG00000014397	prpf8	100	99.102	Amphiprion_percula
ENSTRUG00000015906	prpf8	100	98.417	ENSATEG00000010062	prpf8	100	98.417	Anabas_testudineus
ENSTRUG00000015906	prpf8	96	97.998	ENSAPLG00000010357	PRPF8	100	97.998	Anas_platyrhynchos
ENSTRUG00000015906	prpf8	83	96.031	ENSACAG00000014784	PRPF8	99	96.031	Anolis_carolinensis
ENSTRUG00000015906	prpf8	100	97.563	ENSANAG00000032629	PRPF8	100	97.563	Aotus_nancymaae
ENSTRUG00000015906	prpf8	100	98.468	ENSACLG00000020858	prpf8	100	98.468	Astatotilapia_calliptera
ENSTRUG00000015906	prpf8	100	98.589	ENSAMXG00000020291	prpf8	100	98.589	Astyanax_mexicanus
ENSTRUG00000015906	prpf8	100	97.563	ENSBTAG00000011488	PRPF8	100	97.563	Bos_taurus
ENSTRUG00000015906	prpf8	99	86.489	WBGene00004187	prp-8	99	86.938	Caenorhabditis_elegans
ENSTRUG00000015906	prpf8	100	97.563	ENSCJAG00000001911	PRPF8	100	97.563	Callithrix_jacchus
ENSTRUG00000015906	prpf8	100	97.563	ENSCAFG00000019221	PRPF8	100	97.563	Canis_familiaris
ENSTRUG00000015906	prpf8	96	97.992	ENSCAFG00020009943	PRPF8	100	97.992	Canis_lupus_dingo
ENSTRUG00000015906	prpf8	100	97.563	ENSCHIG00000017499	PRPF8	100	97.563	Capra_hircus
ENSTRUG00000015906	prpf8	100	97.563	ENSTSYG00000014120	PRPF8	100	97.563	Carlito_syrichta
ENSTRUG00000015906	prpf8	96	95.768	ENSCAPG00000009459	PRPF8	99	95.768	Cavia_aperea
ENSTRUG00000015906	prpf8	100	97.563	ENSCPOG00000010379	PRPF8	100	97.563	Cavia_porcellus
ENSTRUG00000015906	prpf8	100	97.563	ENSCCAG00000031983	-	100	97.563	Cebus_capucinus
ENSTRUG00000015906	prpf8	100	97.563	ENSCATG00000038595	PRPF8	100	97.563	Cercocebus_atys
ENSTRUG00000015906	prpf8	100	97.563	ENSCLAG00000004388	PRPF8	100	97.563	Chinchilla_lanigera
ENSTRUG00000015906	prpf8	100	97.563	ENSCSAG00000013929	PRPF8	100	97.563	Chlorocebus_sabaeus
ENSTRUG00000015906	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSTRUG00000015906	prpf8	100	97.648	ENSCPBG00000020409	PRPF8	100	97.648	Chrysemys_picta_bellii
ENSTRUG00000015906	prpf8	98	92.832	ENSCSAVG00000007825	-	100	91.151	Ciona_savignyi
ENSTRUG00000015906	prpf8	100	97.563	ENSCANG00000043088	PRPF8	100	97.563	Colobus_angolensis_palliatus
ENSTRUG00000015906	prpf8	73	99.213	ENSCGRG00000005129	Prpf8	100	99.213	Cricetulus_griseus_crigri
ENSTRUG00000015906	prpf8	100	98.974	ENSCSEG00000007905	prpf8	100	98.974	Cynoglossus_semilaevis
ENSTRUG00000015906	prpf8	100	98.548	ENSDARG00000026180	prpf8	100	98.548	Danio_rerio
ENSTRUG00000015906	prpf8	93	97.748	ENSDNOG00000018471	PRPF8	99	97.748	Dasypus_novemcinctus
ENSTRUG00000015906	prpf8	84	96.320	ENSDORG00000006185	Prpf8	96	96.320	Dipodomys_ordii
ENSTRUG00000015906	prpf8	99	91.413	FBgn0033688	Prp8	97	91.706	Drosophila_melanogaster
ENSTRUG00000015906	prpf8	100	92.262	ENSETEG00000017592	PRPF8	100	92.262	Echinops_telfairi
ENSTRUG00000015906	prpf8	99	93.476	ENSEBUG00000006548	prpf8	99	93.476	Eptatretus_burgeri
ENSTRUG00000015906	prpf8	100	97.563	ENSEASG00005009514	PRPF8	100	97.563	Equus_asinus_asinus
ENSTRUG00000015906	prpf8	97	98.022	ENSECAG00000021318	PRPF8	100	98.022	Equus_caballus
ENSTRUG00000015906	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSTRUG00000015906	prpf8	98	97.509	ENSELUG00000007120	prpf8	99	97.509	Esox_lucius
ENSTRUG00000015906	prpf8	100	97.563	ENSFCAG00000006297	PRPF8	100	97.563	Felis_catus
ENSTRUG00000015906	prpf8	100	97.648	ENSFALG00000006628	PRPF8	100	97.648	Ficedula_albicollis
ENSTRUG00000015906	prpf8	100	97.563	ENSFDAG00000004711	PRPF8	100	97.563	Fukomys_damarensis
ENSTRUG00000015906	prpf8	100	98.335	ENSFHEG00000021084	prpf8	100	98.335	Fundulus_heteroclitus
ENSTRUG00000015906	prpf8	100	96.574	ENSGMOG00000002028	prpf8	99	96.574	Gadus_morhua
ENSTRUG00000015906	prpf8	100	97.648	ENSGALG00000002943	PRPF8	100	97.648	Gallus_gallus
ENSTRUG00000015906	prpf8	99	98.415	ENSGAFG00000010337	prpf8	99	98.415	Gambusia_affinis
ENSTRUG00000015906	prpf8	100	98.933	ENSGACG00000008504	prpf8	100	98.931	Gasterosteus_aculeatus
ENSTRUG00000015906	prpf8	100	97.690	ENSGAGG00000008350	PRPF8	100	97.690	Gopherus_agassizii
ENSTRUG00000015906	prpf8	100	97.563	ENSGGOG00000005516	PRPF8	100	97.563	Gorilla_gorilla
ENSTRUG00000015906	prpf8	100	98.631	ENSHBUG00000016192	prpf8	100	98.631	Haplochromis_burtoni
ENSTRUG00000015906	prpf8	100	97.563	ENSHGLG00000012029	PRPF8	100	97.563	Heterocephalus_glaber_female
ENSTRUG00000015906	prpf8	100	97.563	ENSHGLG00100016494	PRPF8	100	97.563	Heterocephalus_glaber_male
ENSTRUG00000015906	prpf8	100	98.589	ENSHCOG00000016414	prpf8	100	98.589	Hippocampus_comes
ENSTRUG00000015906	prpf8	100	98.631	ENSIPUG00000023230	prpf8	100	98.631	Ictalurus_punctatus
ENSTRUG00000015906	prpf8	100	97.563	ENSSTOG00000005128	PRPF8	100	97.563	Ictidomys_tridecemlineatus
ENSTRUG00000015906	prpf8	100	95.425	ENSJJAG00000021159	Prpf8	100	95.425	Jaculus_jaculus
ENSTRUG00000015906	prpf8	99	98.713	ENSKMAG00000016118	prpf8	99	98.713	Kryptolebias_marmoratus
ENSTRUG00000015906	prpf8	100	99.145	ENSLBEG00000026903	prpf8	100	99.145	Labrus_bergylta
ENSTRUG00000015906	prpf8	95	95.401	ENSLACG00000010479	PRPF8	99	98.116	Latimeria_chalumnae
ENSTRUG00000015906	prpf8	99	98.290	ENSLOCG00000005409	prpf8	99	98.290	Lepisosteus_oculatus
ENSTRUG00000015906	prpf8	100	97.563	ENSLAFG00000015445	PRPF8	100	97.563	Loxodonta_africana
ENSTRUG00000015906	prpf8	100	97.563	ENSMFAG00000039995	PRPF8	100	97.563	Macaca_fascicularis
ENSTRUG00000015906	prpf8	100	97.563	ENSMMUG00000004820	PRPF8	100	97.563	Macaca_mulatta
ENSTRUG00000015906	prpf8	100	97.563	ENSMNEG00000035713	PRPF8	100	97.563	Macaca_nemestrina
ENSTRUG00000015906	prpf8	100	97.563	ENSMLEG00000037937	PRPF8	100	97.563	Mandrillus_leucophaeus
ENSTRUG00000015906	prpf8	100	98.973	ENSMAMG00000008919	prpf8	100	98.973	Mastacembelus_armatus
ENSTRUG00000015906	prpf8	100	98.468	ENSMZEG00005015073	prpf8	100	98.468	Maylandia_zebra
ENSTRUG00000015906	prpf8	100	97.648	ENSMGAG00000004769	PRPF8	100	97.648	Meleagris_gallopavo
ENSTRUG00000015906	prpf8	100	97.563	ENSMICG00000010320	PRPF8	100	97.563	Microcebus_murinus
ENSTRUG00000015906	prpf8	100	97.563	ENSMOCG00000016838	Prpf8	100	97.563	Microtus_ochrogaster
ENSTRUG00000015906	prpf8	100	98.717	ENSMMOG00000011887	prpf8	100	98.717	Mola_mola
ENSTRUG00000015906	prpf8	100	97.563	ENSMODG00000010480	PRPF8	100	97.563	Monodelphis_domestica
ENSTRUG00000015906	prpf8	97	98.262	ENSMALG00000003558	prpf8	100	98.262	Monopterus_albus
ENSTRUG00000015906	prpf8	100	97.520	MGP_CAROLIEiJ_G0016740	Prpf8	100	97.520	Mus_caroli
ENSTRUG00000015906	prpf8	100	97.520	ENSMUSG00000020850	Prpf8	100	97.520	Mus_musculus
ENSTRUG00000015906	prpf8	100	97.478	MGP_PahariEiJ_G0017877	Prpf8	100	97.478	Mus_pahari
ENSTRUG00000015906	prpf8	100	97.520	MGP_SPRETEiJ_G0017583	Prpf8	100	97.520	Mus_spretus
ENSTRUG00000015906	prpf8	100	97.563	ENSMPUG00000013227	PRPF8	100	97.563	Mustela_putorius_furo
ENSTRUG00000015906	prpf8	100	97.438	ENSMLUG00000002666	PRPF8	100	97.438	Myotis_lucifugus
ENSTRUG00000015906	prpf8	100	95.853	ENSNGAG00000005305	Prpf8	100	95.853	Nannospalax_galili
ENSTRUG00000015906	prpf8	100	98.511	ENSNBRG00000013127	prpf8	100	98.511	Neolamprologus_brichardi
ENSTRUG00000015906	prpf8	97	96.573	ENSNLEG00000000897	PRPF8	98	96.573	Nomascus_leucogenys
ENSTRUG00000015906	prpf8	98	96.176	ENSMEUG00000015999	PRPF8	100	96.176	Notamacropus_eugenii
ENSTRUG00000015906	prpf8	100	95.810	ENSOPRG00000003102	PRPF8	100	95.810	Ochotona_princeps
ENSTRUG00000015906	prpf8	100	97.563	ENSODEG00000008468	PRPF8	100	97.563	Octodon_degus
ENSTRUG00000015906	prpf8	100	98.468	ENSONIG00000008153	prpf8	100	98.468	Oreochromis_niloticus
ENSTRUG00000015906	prpf8	82	99.065	ENSOANG00000004250	PRPF8	97	99.065	Ornithorhynchus_anatinus
ENSTRUG00000015906	prpf8	100	97.563	ENSOCUG00000000081	PRPF8	100	97.563	Oryctolagus_cuniculus
ENSTRUG00000015906	prpf8	100	98.131	ENSORLG00000008036	prpf8	100	98.131	Oryzias_latipes
ENSTRUG00000015906	prpf8	100	98.089	ENSORLG00020021070	prpf8	100	98.089	Oryzias_latipes_hni
ENSTRUG00000015906	prpf8	100	98.131	ENSORLG00015002340	prpf8	100	98.131	Oryzias_latipes_hsok
ENSTRUG00000015906	prpf8	100	96.559	ENSOMEG00000016866	prpf8	100	96.559	Oryzias_melastigma
ENSTRUG00000015906	prpf8	100	97.438	ENSOARG00000013312	PRPF8	100	97.438	Ovis_aries
ENSTRUG00000015906	prpf8	100	97.563	ENSPPAG00000042753	PRPF8	100	97.563	Pan_paniscus
ENSTRUG00000015906	prpf8	100	97.563	ENSPPRG00000008746	PRPF8	100	97.563	Panthera_pardus
ENSTRUG00000015906	prpf8	100	97.478	ENSPTIG00000019200	PRPF8	100	97.478	Panthera_tigris_altaica
ENSTRUG00000015906	prpf8	100	97.563	ENSPTRG00000039576	PRPF8	100	97.563	Pan_troglodytes
ENSTRUG00000015906	prpf8	98	98.002	ENSPANG00000024607	PRPF8	98	98.002	Papio_anubis
ENSTRUG00000015906	prpf8	100	98.124	ENSPKIG00000011201	prpf8	100	98.124	Paramormyrops_kingsleyae
ENSTRUG00000015906	prpf8	100	97.605	ENSPSIG00000013393	PRPF8	100	97.605	Pelodiscus_sinensis
ENSTRUG00000015906	prpf8	100	97.563	ENSPEMG00000021699	Prpf8	100	97.563	Peromyscus_maniculatus_bairdii
ENSTRUG00000015906	prpf8	96	93.853	ENSPMAG00000005438	prpf8	100	93.898	Petromyzon_marinus
ENSTRUG00000015906	prpf8	100	97.563	ENSPCIG00000022603	PRPF8	100	97.992	Phascolarctos_cinereus
ENSTRUG00000015906	prpf8	100	97.795	ENSPFOG00000007005	prpf8	100	97.752	Poecilia_formosa
ENSTRUG00000015906	prpf8	100	96.963	ENSPLAG00000020777	prpf8	100	96.963	Poecilia_latipinna
ENSTRUG00000015906	prpf8	100	97.795	ENSPMEG00000004051	prpf8	100	97.752	Poecilia_mexicana
ENSTRUG00000015906	prpf8	100	98.503	ENSPREG00000021902	prpf8	100	98.503	Poecilia_reticulata
ENSTRUG00000015906	prpf8	100	97.563	ENSPPYG00000007777	PRPF8	100	97.563	Pongo_abelii
ENSTRUG00000015906	prpf8	90	96.535	ENSPCAG00000008938	PRPF8	90	96.535	Procavia_capensis
ENSTRUG00000015906	prpf8	100	97.563	ENSPCOG00000015182	PRPF8	100	97.563	Propithecus_coquereli
ENSTRUG00000015906	prpf8	93	98.448	ENSPVAG00000002134	PRPF8	93	98.448	Pteropus_vampyrus
ENSTRUG00000015906	prpf8	100	98.631	ENSPNYG00000016356	prpf8	100	98.631	Pundamilia_nyererei
ENSTRUG00000015906	prpf8	100	98.845	ENSPNAG00000009247	prpf8	100	98.845	Pygocentrus_nattereri
ENSTRUG00000015906	prpf8	100	97.520	ENSRNOG00000003495	Prpf8	100	97.520	Rattus_norvegicus
ENSTRUG00000015906	prpf8	100	97.563	ENSRBIG00000031219	PRPF8	100	97.563	Rhinopithecus_bieti
ENSTRUG00000015906	prpf8	100	97.563	ENSRROG00000038014	PRPF8	100	97.563	Rhinopithecus_roxellana
ENSTRUG00000015906	prpf8	99	62.258	YHR165C	PRP8	95	62.344	Saccharomyces_cerevisiae
ENSTRUG00000015906	prpf8	100	97.563	ENSSBOG00000029717	PRPF8	100	97.563	Saimiri_boliviensis_boliviensis
ENSTRUG00000015906	prpf8	100	97.520	ENSSHAG00000006167	PRPF8	100	97.520	Sarcophilus_harrisii
ENSTRUG00000015906	prpf8	100	98.292	ENSSFOG00015013905	prpf8	100	98.292	Scleropages_formosus
ENSTRUG00000015906	prpf8	100	98.888	ENSSMAG00000017736	prpf8	100	98.888	Scophthalmus_maximus
ENSTRUG00000015906	prpf8	100	99.102	ENSSDUG00000003029	prpf8	100	99.102	Seriola_dumerili
ENSTRUG00000015906	prpf8	68	99.499	ENSSLDG00000017096	prpf8	100	99.499	Seriola_lalandi_dorsalis
ENSTRUG00000015906	prpf8	87	94.336	ENSSARG00000002892	PRPF8	87	94.336	Sorex_araneus
ENSTRUG00000015906	prpf8	100	97.478	ENSSPUG00000007463	PRPF8	100	97.478	Sphenodon_punctatus
ENSTRUG00000015906	prpf8	100	98.546	ENSSPAG00000015639	prpf8	100	98.546	Stegastes_partitus
ENSTRUG00000015906	prpf8	100	97.563	ENSSSCG00000017817	PRPF8	100	97.563	Sus_scrofa
ENSTRUG00000015906	prpf8	52	98.604	ENSTGUG00000015597	-	95	98.604	Taeniopygia_guttata
ENSTRUG00000015906	prpf8	100	97.648	ENSTGUG00000005648	-	100	97.648	Taeniopygia_guttata
ENSTRUG00000015906	prpf8	95	99.821	ENSTNIG00000003460	prpf8	99	99.821	Tetraodon_nigroviridis
ENSTRUG00000015906	prpf8	93	98.775	ENSTBEG00000006431	PRPF8	93	98.775	Tupaia_belangeri
ENSTRUG00000015906	prpf8	100	96.965	ENSTTRG00000006869	PRPF8	100	96.965	Tursiops_truncatus
ENSTRUG00000015906	prpf8	54	96.437	ENSUAMG00000015644	-	96	96.437	Ursus_americanus
ENSTRUG00000015906	prpf8	100	97.307	ENSUMAG00000009385	PRPF8	100	97.307	Ursus_maritimus
ENSTRUG00000015906	prpf8	71	97.931	ENSVPAG00000006063	-	71	97.931	Vicugna_pacos
ENSTRUG00000015906	prpf8	100	97.563	ENSVVUG00000021695	PRPF8	99	97.563	Vulpes_vulpes
ENSTRUG00000015906	prpf8	100	97.392	ENSXETG00000022259	prpf8	100	97.392	Xenopus_tropicalis
ENSTRUG00000015906	prpf8	100	98.334	ENSXCOG00000012775	prpf8	100	98.334	Xiphophorus_couchianus
ENSTRUG00000015906	prpf8	100	98.377	ENSXMAG00000008505	prpf8	100	98.377	Xiphophorus_maculatus