EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTRUG00000016249 (Gene tree)
Gene ID
-
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Takifugu_rubripes
Status
putative
Strand
Plus strand
Length
5391 bases
Position
chr21:5673641-5679031
Accession
7330
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTRUP00000041542RRM_1PF00076.222.5e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTRUT00000041686MSI1-201729-ENSTRUP00000041542242 (aa)-H2UX63
Gene Model
Click here to download ENSTRUG00000016249's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000016249's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTRUG00000016249MSI110066.403ENSTRUG00000015636-7072.811
ENSTRUG00000016249MSI110060.630ENSTRUG00000021248msi2a7765.138
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTRUG00000016249MSI110073.783ENSG00000135097MSI18180.952Homo_sapiens
ENSTRUG00000016249MSI110081.818ENSAPOG00000003191MSI18190.783Acanthochromis_polyacanthus
ENSTRUG00000016249MSI110087.008ENSAPOG00000023458-8987.008Acanthochromis_polyacanthus
ENSTRUG00000016249MSI110054.545ENSAMEG00000013302MSI19054.064Ailuropoda_melanoleuca
ENSTRUG00000016249MSI19087.615ENSACIG00000017754-7390.821Amphilophus_citrinellus
ENSTRUG00000016249MSI110081.818ENSAOCG00000003804MSI18190.783Amphiprion_ocellaris
ENSTRUG00000016249MSI110074.704ENSAOCG00000009031-8282.028Amphiprion_ocellaris
ENSTRUG00000016249MSI110087.008ENSAPEG00000006857-7587.008Amphiprion_percula
ENSTRUG00000016249MSI110081.818ENSAPEG00000003245MSI18190.783Amphiprion_percula
ENSTRUG00000016249MSI110087.402ENSATEG00000017059MSI19097.717Anabas_testudineus
ENSTRUG00000016249MSI110074.609ENSATEG00000023779-8083.028Anabas_testudineus
ENSTRUG00000016249MSI110073.962ENSACAG00000002762MSI18182.533Anolis_carolinensis
ENSTRUG00000016249MSI17472.775ENSANAG00000027901-6683.226Aotus_nancymaae
ENSTRUG00000016249MSI110073.783ENSANAG00000027151MSI18280.952Aotus_nancymaae
ENSTRUG00000016249MSI110088.142ENSACLG00000000117-9488.142Astatotilapia_calliptera
ENSTRUG00000016249MSI110081.890ENSACLG00000011230MSI18091.667Astatotilapia_calliptera
ENSTRUG00000016249MSI110082.677ENSAMXG00000038960msi16792.593Astyanax_mexicanus
ENSTRUG00000016249MSI110073.783ENSBTAG00000009800MSI18680.952Bos_taurus
ENSTRUG00000016249MSI110073.783ENSCJAG00000008578MSI18180.952Callithrix_jacchus
ENSTRUG00000016249MSI110073.783ENSCAFG00000010283MSI18180.952Canis_familiaris
ENSTRUG00000016249MSI110073.783ENSCAFG00020020585MSI17480.952Canis_lupus_dingo
ENSTRUG00000016249MSI110070.956ENSCHIG00000024304MSI18177.542Capra_hircus
ENSTRUG00000016249MSI110077.734ENSTSYG00000033949MSI19977.734Carlito_syrichta
ENSTRUG00000016249MSI110073.783ENSCAPG00000003919MSI16581.659Cavia_aperea
ENSTRUG00000016249MSI110073.783ENSCPOG00000012361MSI18680.952Cavia_porcellus
ENSTRUG00000016249MSI110073.783ENSCCAG00000035567MSI18180.952Cebus_capucinus
ENSTRUG00000016249MSI110073.783ENSCATG00000030019MSI18180.952Cercocebus_atys
ENSTRUG00000016249MSI110073.783ENSCLAG00000011329MSI18680.952Chinchilla_lanigera
ENSTRUG00000016249MSI16869.231ENSCSAG00000002265MSI17279.452Chlorocebus_sabaeus
ENSTRUG00000016249MSI110077.734ENSCPBG00000011349MSI18185.455Chrysemys_picta_bellii
ENSTRUG00000016249MSI110073.783ENSCANG00000040651MSI19080.952Colobus_angolensis_palliatus
ENSTRUG00000016249MSI110073.783ENSCGRG00001018883Msi18180.952Cricetulus_griseus_chok1gshd
ENSTRUG00000016249MSI110073.783ENSCGRG00000002191Msi16480.952Cricetulus_griseus_crigri
ENSTRUG00000016249MSI110080.632ENSCSEG00000005834-9490.654Cynoglossus_semilaevis
ENSTRUG00000016249MSI110086.166ENSCSEG00000008352-8986.166Cynoglossus_semilaevis
ENSTRUG00000016249MSI110081.818ENSCSEG00000011032MSI19480.165Cynoglossus_semilaevis
ENSTRUG00000016249MSI19790.698ENSCVAG00000009100MSI18987.352Cyprinodon_variegatus
ENSTRUG00000016249MSI19968.465ENSCVAG00000017463-8874.884Cyprinodon_variegatus
ENSTRUG00000016249MSI18992.558ENSDARG00000102015CABZ01037298.19192.237Danio_rerio
ENSTRUG00000016249MSI110075.984ENSDARG00000010710msi18983.486Danio_rerio
ENSTRUG00000016249MSI110070.079ENSDNOG00000005713MSI18177.064Dasypus_novemcinctus
ENSTRUG00000016249MSI110073.783ENSDORG00000005610Msi18480.952Dipodomys_ordii
ENSTRUG00000016249MSI110070.037ENSETEG00000004756MSI19076.623Echinops_telfairi
ENSTRUG00000016249MSI110073.783ENSEASG00005004736MSI18180.952Equus_asinus_asinus
ENSTRUG00000016249MSI110073.783ENSECAG00000017526MSI18180.952Equus_caballus
ENSTRUG00000016249MSI110078.467ENSELUG00000023219MSI18085.714Esox_lucius
ENSTRUG00000016249MSI110074.308ENSELUG00000023280-8681.106Esox_lucius
ENSTRUG00000016249MSI110073.783ENSFCAG00000011007MSI18180.952Felis_catus
ENSTRUG00000016249MSI110077.734ENSFALG00000007574MSI17385.909Ficedula_albicollis
ENSTRUG00000016249MSI110073.408ENSFDAG00000019586MSI19080.519Fukomys_damarensis
ENSTRUG00000016249MSI110087.008ENSFHEG00000022446MSI18987.008Fundulus_heteroclitus
ENSTRUG00000016249MSI110081.818ENSFHEG00000003560-8190.783Fundulus_heteroclitus
ENSTRUG00000016249MSI110079.457ENSGMOG00000017838-6386.937Gadus_morhua
ENSTRUG00000016249MSI110083.794ENSGMOG00000001006MSI18093.488Gadus_morhua
ENSTRUG00000016249MSI110077.734ENSGALG00000007227MSI18168.462Gallus_gallus
ENSTRUG00000016249MSI19785.965ENSGAFG00000005860-6385.965Gambusia_affinis
ENSTRUG00000016249MSI110080.632ENSGAFG00000021522MSI18188.940Gambusia_affinis
ENSTRUG00000016249MSI110085.433ENSGACG00000012679MSI18985.433Gasterosteus_aculeatus
ENSTRUG00000016249MSI110076.316ENSGACG00000008674-6384.649Gasterosteus_aculeatus
ENSTRUG00000016249MSI110077.344ENSGAGG00000016037MSI18185.455Gopherus_agassizii
ENSTRUG00000016249MSI110073.783ENSGGOG00000010328MSI17480.952Gorilla_gorilla
ENSTRUG00000016249MSI110081.890ENSHBUG00000021921MSI18091.667Haplochromis_burtoni
ENSTRUG00000016249MSI110087.747ENSHBUG00000011841-8987.747Haplochromis_burtoni
ENSTRUG00000016249MSI110073.408ENSHGLG00000012782MSI18180.519Heterocephalus_glaber_female
ENSTRUG00000016249MSI110073.408ENSHGLG00100016848MSI19080.519Heterocephalus_glaber_male
ENSTRUG00000016249MSI110085.375ENSHCOG00000012067-8095.814Hippocampus_comes
ENSTRUG00000016249MSI19578.750ENSHCOG00000012019MSI18187.255Hippocampus_comes
ENSTRUG00000016249MSI110083.333ENSIPUG00000001976msi18293.056Ictalurus_punctatus
ENSTRUG00000016249MSI110073.783ENSSTOG00000009799MSI17480.952Ictidomys_tridecemlineatus
ENSTRUG00000016249MSI110060.526ENSJJAG00000010643-6066.820Jaculus_jaculus
ENSTRUG00000016249MSI110073.783ENSJJAG00000010463Msi18180.952Jaculus_jaculus
ENSTRUG00000016249MSI110085.771ENSKMAG00000011251MSI18985.771Kryptolebias_marmoratus
ENSTRUG00000016249MSI110074.308ENSKMAG00000019877-8581.567Kryptolebias_marmoratus
ENSTRUG00000016249MSI110086.614ENSLBEG00000008789MSI18986.614Labrus_bergylta
ENSTRUG00000016249MSI110082.213ENSLBEG00000001375-8191.244Labrus_bergylta
ENSTRUG00000016249MSI110071.161ENSLACG00000018287MSI18778.017Latimeria_chalumnae
ENSTRUG00000016249MSI110073.034ENSLAFG00000009412MSI19278.298Loxodonta_africana
ENSTRUG00000016249MSI110073.783ENSMFAG00000001798MSI18680.952Macaca_fascicularis
ENSTRUG00000016249MSI110073.783ENSMMUG00000031527MSI18180.952Macaca_mulatta
ENSTRUG00000016249MSI110073.783ENSMNEG00000040034MSI18180.952Macaca_nemestrina
ENSTRUG00000016249MSI110073.783ENSMLEG00000003921MSI19080.952Mandrillus_leucophaeus
ENSTRUG00000016249MSI110081.423ENSMAMG00000018426-8090.323Mastacembelus_armatus
ENSTRUG00000016249MSI110086.957ENSMAMG00000002279MSI18786.957Mastacembelus_armatus
ENSTRUG00000016249MSI110081.890ENSMZEG00005026892MSI18091.667Maylandia_zebra
ENSTRUG00000016249MSI110087.747ENSMZEG00005000340-8987.747Maylandia_zebra
ENSTRUG00000016249MSI15575.172ENSMGAG00000016518-6489.908Meleagris_gallopavo
ENSTRUG00000016249MSI16573.214ENSMAUG00000016820Msi18084.848Mesocricetus_auratus
ENSTRUG00000016249MSI110073.783ENSMICG00000033181MSI18180.952Microcebus_murinus
ENSTRUG00000016249MSI110074.627ENSMOCG00000002286Msi18180.952Microtus_ochrogaster
ENSTRUG00000016249MSI110075.494ENSMMOG00000012265-8682.949Mola_mola
ENSTRUG00000016249MSI110071.146ENSMMOG00000010492MSI17977.880Mola_mola
ENSTRUG00000016249MSI19343.154ENSMODG00000003189-8843.103Monodelphis_domestica
ENSTRUG00000016249MSI110081.028ENSMALG00000001426-8689.401Monopterus_albus
ENSTRUG00000016249MSI110087.747ENSMALG00000017889MSI18987.747Monopterus_albus
ENSTRUG00000016249MSI110073.408MGP_CAROLIEiJ_G0027626Msi18577.174Mus_caroli
ENSTRUG00000016249MSI110076.562ENSMUSG00000054256Msi18784.545Mus_musculus
ENSTRUG00000016249MSI110076.863MGP_PahariEiJ_G0024206Msi18184.932Mus_pahari
ENSTRUG00000016249MSI110073.408MGP_SPRETEiJ_G0028624Msi18577.174Mus_spretus
ENSTRUG00000016249MSI110073.783ENSMPUG00000003168MSI17480.952Mustela_putorius_furo
ENSTRUG00000016249MSI110064.835ENSMLUG00000010313MSI18474.091Myotis_lucifugus
ENSTRUG00000016249MSI110073.783ENSNGAG00000014508Msi18180.952Nannospalax_galili
ENSTRUG00000016249MSI19688.462ENSNBRG00000018012MSI19190.991Neolamprologus_brichardi
ENSTRUG00000016249MSI110087.747ENSNBRG00000000841-8987.747Neolamprologus_brichardi
ENSTRUG00000016249MSI110062.172ENSNLEG00000015636MSI16767.532Nomascus_leucogenys
ENSTRUG00000016249MSI110059.925ENSMEUG00000015759MSI17064.935Notamacropus_eugenii
ENSTRUG00000016249MSI19564.173ENSOPRG00000016879MSI18870.183Ochotona_princeps
ENSTRUG00000016249MSI110073.783ENSODEG00000006328MSI19080.952Octodon_degus
ENSTRUG00000016249MSI110077.903ENSONIG00000019452-8186.463Oreochromis_niloticus
ENSTRUG00000016249MSI110098.529ENSONIG00000011182MSI18987.747Oreochromis_niloticus
ENSTRUG00000016249MSI110073.783ENSOCUG00000027716MSI17480.952Oryctolagus_cuniculus
ENSTRUG00000016249MSI110087.402ENSORLG00000019978-8987.402Oryzias_latipes
ENSTRUG00000016249MSI110081.028ENSORLG00000029593MSI18089.862Oryzias_latipes
ENSTRUG00000016249MSI110087.402ENSORLG00020001208-6387.402Oryzias_latipes_hni
ENSTRUG00000016249MSI110081.028ENSORLG00020008266MSI17989.862Oryzias_latipes_hni
ENSTRUG00000016249MSI110081.028ENSORLG00015003916MSI18089.862Oryzias_latipes_hsok
ENSTRUG00000016249MSI110087.402ENSORLG00015013672-6387.402Oryzias_latipes_hsok
ENSTRUG00000016249MSI110087.402ENSOMEG00000017536MSI18987.402Oryzias_melastigma
ENSTRUG00000016249MSI110081.423ENSOMEG00000002272-8289.862Oryzias_melastigma
ENSTRUG00000016249MSI110072.963ENSOGAG00000003847MSI18179.915Otolemur_garnettii
ENSTRUG00000016249MSI110070.522ENSOARG00000012097MSI18977.155Ovis_aries
ENSTRUG00000016249MSI110073.783ENSPPAG00000043073MSI19080.952Pan_paniscus
ENSTRUG00000016249MSI110073.783ENSPPRG00000000370MSI18180.952Panthera_pardus
ENSTRUG00000016249MSI110073.783ENSPTIG00000008913MSI17480.952Panthera_tigris_altaica
ENSTRUG00000016249MSI110073.783ENSPTRG00000005531MSI18180.952Pan_troglodytes
ENSTRUG00000016249MSI110073.783ENSPANG00000006335MSI16480.952Papio_anubis
ENSTRUG00000016249MSI110083.071ENSPKIG00000023575-8092.166Paramormyrops_kingsleyae
ENSTRUG00000016249MSI110081.423ENSPKIG00000016497MSI18190.323Paramormyrops_kingsleyae
ENSTRUG00000016249MSI18980.702ENSPSIG00000009621-10080.702Pelodiscus_sinensis
ENSTRUG00000016249MSI110074.308ENSPSIG00000011608-7881.567Pelodiscus_sinensis
ENSTRUG00000016249MSI110062.109ENSPMGG00000007743-7867.742Periophthalmus_magnuspinnatus
ENSTRUG00000016249MSI19579.167ENSPMGG00000000514MSI19179.167Periophthalmus_magnuspinnatus
ENSTRUG00000016249MSI110073.408ENSPEMG00000010491Msi18280.952Peromyscus_maniculatus_bairdii
ENSTRUG00000016249MSI110081.028ENSPFOG00000008319-6990.698Poecilia_formosa
ENSTRUG00000016249MSI110087.402ENSPFOG00000013113MSI18987.402Poecilia_formosa
ENSTRUG00000016249MSI110087.402ENSPLAG00000014025-8987.402Poecilia_latipinna
ENSTRUG00000016249MSI110081.028ENSPLAG00000012431-7890.698Poecilia_latipinna
ENSTRUG00000016249MSI110080.237ENSPMEG00000007025-6989.767Poecilia_mexicana
ENSTRUG00000016249MSI110087.402ENSPMEG00000012796MSI18987.402Poecilia_mexicana
ENSTRUG00000016249MSI19687.607ENSPREG00000021416-7292.093Poecilia_reticulata
ENSTRUG00000016249MSI18785.520ENSPREG00000014574-10085.520Poecilia_reticulata
ENSTRUG00000016249MSI110073.783ENSPPYG00000005027MSI18180.952Pongo_abelii
ENSTRUG00000016249MSI17475.393ENSPCAG00000002300MSI15785.806Procavia_capensis
ENSTRUG00000016249MSI110073.783ENSPCOG00000017341MSI18180.952Propithecus_coquereli
ENSTRUG00000016249MSI110055.056ENSPVAG00000002225MSI19059.307Pteropus_vampyrus
ENSTRUG00000016249MSI110087.747ENSPNYG00000002529-8987.747Pundamilia_nyererei
ENSTRUG00000016249MSI110081.890ENSPNYG00000004379MSI18091.667Pundamilia_nyererei
ENSTRUG00000016249MSI110082.283ENSPNAG00000019337msi18192.130Pygocentrus_nattereri
ENSTRUG00000016249MSI110073.783ENSRNOG00000001156Msi17480.952Rattus_norvegicus
ENSTRUG00000016249MSI110073.783ENSRBIG00000036889MSI17480.952Rhinopithecus_bieti
ENSTRUG00000016249MSI110073.783ENSRROG00000041076MSI18380.952Rhinopithecus_roxellana
ENSTRUG00000016249MSI110073.783ENSSBOG00000030259MSI18480.952Saimiri_boliviensis_boliviensis
ENSTRUG00000016249MSI110063.333ENSSHAG00000006834MSI17668.966Sarcophilus_harrisii
ENSTRUG00000016249MSI110082.609ENSSFOG00015014964-8291.244Scleropages_formosus
ENSTRUG00000016249MSI110082.422ENSSFOG00015005350MSI18291.364Scleropages_formosus
ENSTRUG00000016249MSI110081.818ENSSMAG00000009156-7290.594Scophthalmus_maximus
ENSTRUG00000016249MSI110079.528ENSSMAG00000018824MSI19579.528Scophthalmus_maximus
ENSTRUG00000016249MSI110087.402ENSSDUG00000001027MSI18987.402Seriola_dumerili
ENSTRUG00000016249MSI110082.213ENSSDUG00000022697-8191.244Seriola_dumerili
ENSTRUG00000016249MSI110087.402ENSSLDG00000016832MSI18987.402Seriola_lalandi_dorsalis
ENSTRUG00000016249MSI110071.910ENSSLDG00000018706-8679.039Seriola_lalandi_dorsalis
ENSTRUG00000016249MSI110077.734ENSSPUG00000015741MSI18185.909Sphenodon_punctatus
ENSTRUG00000016249MSI18780.000ENSSPAG00000014085-10080.000Stegastes_partitus
ENSTRUG00000016249MSI110081.890ENSSPAG00000013098-8790.367Stegastes_partitus
ENSTRUG00000016249MSI110073.408ENSSSCG00000029365MSI18180.519Sus_scrofa
ENSTRUG00000016249MSI110075.472ENSTGUG00000009534MSI18682.533Taeniopygia_guttata
ENSTRUG00000016249MSI110050.195ENSTNIG00000019814-6552.049Tetraodon_nigroviridis
ENSTRUG00000016249MSI19093.088ENSTNIG00000011469MSI17893.088Tetraodon_nigroviridis
ENSTRUG00000016249MSI110064.906ENSTBEG00000007182MSI18570.563Tupaia_belangeri
ENSTRUG00000016249MSI17475.393ENSTTRG00000005663MSI16485.806Tursiops_truncatus
ENSTRUG00000016249MSI16770.349ENSUAMG00000015514MSI15981.618Ursus_americanus
ENSTRUG00000016249MSI110070.787ENSUMAG00000006176MSI16577.489Ursus_maritimus
ENSTRUG00000016249MSI110073.783ENSVVUG00000020993MSI18880.952Vulpes_vulpes
ENSTRUG00000016249MSI110076.285ENSXETG00000012216msi18084.332Xenopus_tropicalis
ENSTRUG00000016249MSI19082.791ENSXCOG00000017605MSI17482.791Xiphophorus_couchianus
ENSTRUG00000016249MSI110087.352ENSXMAG00000027103MSI17489.302Xiphophorus_maculatus
ENSTRUG00000016249MSI110080.632ENSXMAG00000018237-8189.401Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us